NP-MRD: Showing NP-Card for Gerardiin C (NP0353053)

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Record Information

Version

2.0

Created at

2026-02-17 03:46:14 UTC

Updated at

2026-02-17 04:01:32 UTC

NP-MRD ID

NP0353053

Natural Product DOI

https://doi.org/10.57994/7379

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Gerardiin C

Description

Gerardiin C was first documented in 2020 (PMID: 33054206).

Structure

MOL SDF PDB SMILES InChI


  Mrv2104 03182300592D          

 30 33  0  0  1  0            999 V2000
   -2.2539   -2.2539    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8414   -1.5395    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0164   -1.5395    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6039   -2.2539    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2211   -2.2539    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6336   -1.5395    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2211   -0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6039   -0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0164   -0.1105    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8414   -0.1105    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2539   -0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0789   -0.8250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4914   -1.5395    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.0789   -2.2539    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4914   -2.9684    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.3164   -2.9684    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.7289   -2.2539    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.3164   -1.5395    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.7289   -0.8250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5539   -2.2539    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7289   -3.6829    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0789   -3.6829    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4914   -4.3974    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6336   -0.1105    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2211    0.6039    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6336    1.3184    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4586   -0.1105    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8711   -0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6961   -0.8250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4586   -1.5395    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  2  0  0  0  0
  7  8  1  0  0  0  0
  3  8  1  0  0  0  0
  8  9  2  0  0  0  0
  9 10  1  0  0  0  0
 10 11  2  0  0  0  0
  2 11  1  0  0  0  0
 11 12  1  0  0  0  0
 13 12  1  6  0  0  0
 13 14  1  0  0  0  0
 15 14  1  0  0  0  0
 16 15  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 13  1  0  0  0  0
 18 19  1  1  0  0  0
 17 20  1  6  0  0  0
 16 21  1  1  0  0  0
 15 22  1  6  0  0  0
 22 23  1  0  0  0  0
  7 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  2  0  0  0  0
 24 27  2  0  0  0  0
 27 28  1  0  0  0  0
 28 29  1  0  0  0  0
 28 30  2  0  0  0  0
  6 30  1  0  0  0  0
M  END


  Mrv2104 03182300592D          

 30 33  0  0  1  0            999 V2000
   -2.2539   -2.2539    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8414   -1.5395    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0164   -1.5395    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6039   -2.2539    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2211   -2.2539    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6336   -1.5395    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2211   -0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6039   -0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0164   -0.1105    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8414   -0.1105    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2539   -0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0789   -0.8250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4914   -1.5395    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.0789   -2.2539    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4914   -2.9684    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.3164   -2.9684    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.7289   -2.2539    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.3164   -1.5395    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.7289   -0.8250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5539   -2.2539    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7289   -3.6829    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0789   -3.6829    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4914   -4.3974    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6336   -0.1105    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2211    0.6039    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6336    1.3184    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4586   -0.1105    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8711   -0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6961   -0.8250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4586   -1.5395    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  2  0  0  0  0
  7  8  1  0  0  0  0
  3  8  1  0  0  0  0
  8  9  2  0  0  0  0
  9 10  1  0  0  0  0
 10 11  2  0  0  0  0
  2 11  1  0  0  0  0
 11 12  1  0  0  0  0
 13 12  1  6  0  0  0
 13 14  1  0  0  0  0
 15 14  1  0  0  0  0
 16 15  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 13  1  0  0  0  0
 18 19  1  1  0  0  0
 17 20  1  6  0  0  0
 16 21  1  1  0  0  0
 15 22  1  6  0  0  0
 22 23  1  0  0  0  0
  7 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  2  0  0  0  0
 24 27  2  0  0  0  0
 27 28  1  0  0  0  0
 28 29  1  0  0  0  0
 28 30  2  0  0  0  0
  6 30  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0353053

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC1=C2CCC3=C(C(C=C)=CC(O)=C3)C2=CC=C1O[C@@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1O

> <INCHI_IDENTIFIER>
InChI=1S/C23H26O7/c1-3-12-8-14(25)9-13-4-5-15-11(2)17(7-6-16(15)19(12)13)29-23-22(28)21(27)20(26)18(10-24)30-23/h3,6-9,18,20-28H,1,4-5,10H2,2H3/t18-,20-,21+,22-,23-/m1/s1

> <INCHI_KEY>
NAPHOSQYQJPOEW-DODNOZFWSA-N

> <FORMULA>
C23H26O7

> <MOLECULAR_WEIGHT>
414.454

> <EXACT_MASS>
414.167853177

$$$$

HEADER    PROTEIN                                 18-MAR-23   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   18-MAR-23         0                                  
HETATM    1  C   UNK     0      -4.207  -4.207   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -3.437  -2.874   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -1.897  -2.874   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -1.127  -4.207   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       0.413  -4.207   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       1.183  -2.874   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       0.413  -1.540   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      -1.127  -1.540   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      -1.897  -0.206   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      -3.437  -0.206   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      -4.207  -1.540   0.000  0.00  0.00           C+0
HETATM   12  O   UNK     0      -5.747  -1.540   0.000  0.00  0.00           O+0
HETATM   13  C   UNK     0      -6.517  -2.874   0.000  0.00  0.00           C+0
HETATM   14  O   UNK     0      -5.747  -4.207   0.000  0.00  0.00           O+0
HETATM   15  C   UNK     0      -6.517  -5.541   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      -8.057  -5.541   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      -8.827  -4.207   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      -8.057  -2.874   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0      -8.827  -1.540   0.000  0.00  0.00           O+0
HETATM   20  O   UNK     0     -10.367  -4.207   0.000  0.00  0.00           O+0
HETATM   21  O   UNK     0      -8.827  -6.875   0.000  0.00  0.00           O+0
HETATM   22  C   UNK     0      -5.747  -6.875   0.000  0.00  0.00           C+0
HETATM   23  O   UNK     0      -6.517  -8.208   0.000  0.00  0.00           O+0
HETATM   24  C   UNK     0       1.183  -0.206   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       0.413   1.127   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       1.183   2.461   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       2.723  -0.206   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0       3.493  -1.540   0.000  0.00  0.00           C+0
HETATM   29  O   UNK     0       5.033  -1.540   0.000  0.00  0.00           O+0
HETATM   30  C   UNK     0       2.723  -2.874   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3   11                                                  
CONECT    3    2    4    8                                                  
CONECT    4    3    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7   30                                                  
CONECT    7    6    8   24                                                  
CONECT    8    7    3    9                                                  
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10    2   12                                                  
CONECT   12   11   13                                                       
CONECT   13   12   14   18                                                  
CONECT   14   13   15                                                       
CONECT   15   14   16   22                                                  
CONECT   16   15   17   21                                                  
CONECT   17   16   18   20                                                  
CONECT   18   17   13   19                                                  
CONECT   19   18                                                            
CONECT   20   17                                                            
CONECT   21   16                                                            
CONECT   22   15   23                                                       
CONECT   23   22                                                            
CONECT   24    7   25   27                                                  
CONECT   25   24   26                                                       
CONECT   26   25                                                            
CONECT   27   24   28                                                       
CONECT   28   27   29   30                                                  
CONECT   29   28                                                            
CONECT   30   28    6                                                       
MASTER        0    0    0    0    0    0    0    0   30    0   66    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₃H₂₆O₇

Average Mass

414.4540 Da

Monoisotopic Mass

414.16785 Da

IUPAC Name

Not Available

Traditional Name

Not Available

CAS Registry Number

Not Available

SMILES

CC1=C2CCC3=C(C(C=C)=CC(O)=C3)C2=CC=C1O[C@@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1O

InChI Identifier

InChI=1S/C23H26O7/c1-3-12-8-14(25)9-13-4-5-15-11(2)17(7-6-16(15)19(12)13)29-23-22(28)21(27)20(26)18(10-24)30-23/h3,6-9,18,20-28H,1,4-5,10H2,2H3/t18-,20-,21+,22-,23-/m1/s1

InChI Key

NAPHOSQYQJPOEW-DODNOZFWSA-N

Experimental Spectra

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View

Predicted Spectra

Not Available

Chemical Shift Submissions

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹H NMR Spectrum (1D, 500.0, Dimethylsulfoxide-d6, simulated)	[email protected]	Not Available	Not Available	2026-02-17	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 125.0, Dimethylsulfoxide-d6, simulated)	[email protected]	Not Available	Not Available	2026-02-17	View Spectrum

Species

Species of Origin

Species Name	Source	Reference
Juncus gerardii		Not Available

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source

External Links

Not Available

References

General References

Showing NP-Card for Gerardiin C (NP0353053)

MOL for NP0353053 (Gerardiin C)

3D MOL for NP0353053 (Gerardiin C)

3D SDF for NP0353053 (Gerardiin C)

3D-SDF for NP0353053 (Gerardiin C)

PDB for NP0353053 (Gerardiin C)

3D PDB for NP0353053 (Gerardiin C)

SMILES for NP0353053 (Gerardiin C)

INCHI for NP0353053 (Gerardiin C)

Structure for NP0353053 (Gerardiin C)

3D Structure for NP0353053 (Gerardiin C)