NP-MRD: Showing NP-Card for Choerosponol D (NP0352880)

Jump To Section:

Identification Spectra BioTaxonomy ChemoTaxonomy Physical properties Links References XML

Record Information

Version

2.0

Created at

2026-02-15 22:51:38 UTC

Updated at

2026-02-16 00:02:00 UTC

NP-MRD ID

NP0352880

Natural Product DOI

https://doi.org/10.57994/7176

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Choerosponol D

Description

Choerosponol D was first documented in 2020 (PMID: 32105068).

Structure

MOL SDF PDB SMILES InChI


  Mrv2104 03162320042D          

 29 29  0  0  1  0            999 V2000
    2.1636   -4.7699    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9432   -4.4998    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5668   -5.0399    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3464   -4.7699    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9700   -5.3100    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7496   -5.0399    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9055   -4.2298    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2818   -3.6897    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4377   -2.8796    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2173   -2.6095    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8409   -3.1496    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.6205   -2.8796    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.2441   -3.4197    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.0237   -3.1496    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.6473   -3.6897    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.4269   -3.4197    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.0505   -3.9597    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.8301   -3.6897    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   11.9860   -2.8796    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   12.4537   -4.2298    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.2978   -5.0399    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   11.5270   -4.7457    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   13.1227   -5.0528    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.5240   -5.7736    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.3489   -5.7865    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   13.1004   -6.4815    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.2755   -6.4687    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.8742   -5.7479    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   11.0493   -5.7350    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 18 17  1  0  0  0  0
 18 19  1  1  0  0  0
 18 20  1  0  0  0  0
 21 20  1  6  0  0  0
 21 22  1  1  0  0  0
 21 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  2  0  0  0  0
 24 26  1  0  0  0  0
 26 27  2  0  0  0  0
 28 27  1  0  0  0  0
 21 28  1  0  0  0  0
 28 29  1  1  0  0  0
M  END


  Mrv2104 03162320042D          

 29 29  0  0  1  0            999 V2000
    2.1636   -4.7699    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9432   -4.4998    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5668   -5.0399    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3464   -4.7699    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9700   -5.3100    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7496   -5.0399    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9055   -4.2298    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2818   -3.6897    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4377   -2.8796    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2173   -2.6095    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8409   -3.1496    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.6205   -2.8796    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.2441   -3.4197    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.0237   -3.1496    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.6473   -3.6897    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.4269   -3.4197    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.0505   -3.9597    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.8301   -3.6897    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   11.9860   -2.8796    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   12.4537   -4.2298    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.2978   -5.0399    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   11.5270   -4.7457    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   13.1227   -5.0528    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.5240   -5.7736    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.3489   -5.7865    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   13.1004   -6.4815    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.2755   -6.4687    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.8742   -5.7479    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   11.0493   -5.7350    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 18 17  1  0  0  0  0
 18 19  1  1  0  0  0
 18 20  1  0  0  0  0
 21 20  1  6  0  0  0
 21 22  1  1  0  0  0
 21 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  2  0  0  0  0
 24 26  1  0  0  0  0
 26 27  2  0  0  0  0
 28 27  1  0  0  0  0
 21 28  1  0  0  0  0
 28 29  1  1  0  0  0
M  END
> <DATABASE_ID>
NP0352880

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CCCC\C=C/CCCCCCCCCCC[C@@H](O)C[C@]1(O)CC(=O)C=C[C@H]1O

> <INCHI_IDENTIFIER>
InChI=1S/C25H44O4/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-22(26)20-25(29)21-23(27)18-19-24(25)28/h5-6,18-19,22,24,26,28-29H,2-4,7-17,20-21H2,1H3/b6-5-/t22-,24-,25+/m1/s1

> <INCHI_KEY>
CBOSKKOKKUAPTJ-IVKREZRDSA-N

> <FORMULA>
C25H44O4

> <MOLECULAR_WEIGHT>
408.623

> <EXACT_MASS>
408.323959897

$$$$

HEADER    PROTEIN                                 16-MAR-23   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   16-MAR-23         0                                  
HETATM    1  C   UNK     0       4.039  -8.904   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       5.494  -8.400   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       6.658  -9.408   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       8.113  -8.904   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       9.277  -9.912   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      10.733  -9.408   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      11.024  -7.896   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       9.859  -6.887   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      10.150  -5.375   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      11.606  -4.871   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      12.770  -5.879   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      14.225  -5.375   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      15.389  -6.383   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      16.844  -5.879   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      18.008  -6.887   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      19.463  -6.383   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      20.628  -7.392   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      22.083  -6.887   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0      22.374  -5.375   0.000  0.00  0.00           O+0
HETATM   20  C   UNK     0      23.247  -7.896   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      22.956  -9.408   0.000  0.00  0.00           C+0
HETATM   22  O   UNK     0      21.517  -8.859   0.000  0.00  0.00           O+0
HETATM   23  C   UNK     0      24.496  -9.432   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      25.245 -10.777   0.000  0.00  0.00           C+0
HETATM   25  O   UNK     0      26.785 -10.801   0.000  0.00  0.00           O+0
HETATM   26  C   UNK     0      24.454 -12.099   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      22.914 -12.075   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0      22.165 -10.729   0.000  0.00  0.00           C+0
HETATM   29  O   UNK     0      20.625 -10.705   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   19   20                                                  
CONECT   19   18                                                            
CONECT   20   18   21                                                       
CONECT   21   20   22   23   28                                             
CONECT   22   21                                                            
CONECT   23   21   24                                                       
CONECT   24   23   25   26                                                  
CONECT   25   24                                                            
CONECT   26   24   27                                                       
CONECT   27   26   28                                                       
CONECT   28   27   21   29                                                  
CONECT   29   28                                                            
MASTER        0    0    0    0    0    0    0    0   29    0   58    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₅H₄₄O₄

Average Mass

408.6230 Da

Monoisotopic Mass

408.32396 Da

IUPAC Name

Not Available

Traditional Name

Not Available

CAS Registry Number

Not Available

SMILES

CCCC\C=C/CCCCCCCCCCC[C@@H](O)C[C@]1(O)CC(=O)C=C[C@H]1O

InChI Identifier

InChI=1S/C25H44O4/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-22(26)20-25(29)21-23(27)18-19-24(25)28/h5-6,18-19,22,24,26,28-29H,2-4,7-17,20-21H2,1H3/b6-5-/t22-,24-,25+/m1/s1

InChI Key

CBOSKKOKKUAPTJ-IVKREZRDSA-N

Experimental Spectra

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View

Predicted Spectra

Not Available

Chemical Shift Submissions

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹H NMR Spectrum (1D, 500.0, Pyridine-d5, simulated)	[email protected]	Not Available	Not Available	2026-02-15	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 125.0, Pyridine-d5, simulated)	[email protected]	Not Available	Not Available	2026-02-15	View Spectrum

Species

Species of Origin

Species Name	Source	Reference
Choerospondias axillaris		Not Available

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source

External Links

Not Available

References

General References

Showing NP-Card for Choerosponol D (NP0352880)

MOL for NP0352880 (Choerosponol D)

3D MOL for NP0352880 (Choerosponol D)

3D SDF for NP0352880 (Choerosponol D)

3D-SDF for NP0352880 (Choerosponol D)

PDB for NP0352880 (Choerosponol D)

3D PDB for NP0352880 (Choerosponol D)

SMILES for NP0352880 (Choerosponol D)

INCHI for NP0352880 (Choerosponol D)

Structure for NP0352880 (Choerosponol D)

3D Structure for NP0352880 (Choerosponol D)