NP-MRD: Showing NP-Card for Hypecoleptopine E (NP0351550)

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Record Information

Version

2.0

Created at

2025-09-14 07:53:34 UTC

Updated at

2025-12-20 00:37:53 UTC

NP-MRD ID

NP0351550

Natural Product DOI

https://doi.org/10.57994/4597

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Hypecoleptopine E

Description

Based on a literature review very few articles have been published on Hypecoleptopine D.

Structure

MOL SDF PDB SMILES InChI


  Mrv2104 03212301052D          

 35 40  0  0  1  0            999 V2000
    1.4899    2.0760    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8031    1.2767    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5721    0.9779    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5255    0.1542    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2156   -0.2979    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9522    0.0736    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6422   -0.3786    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4400   -0.1683    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.8865   -0.8621    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3647   -1.5011    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.7117   -1.2149    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8591   -1.5738    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1690   -1.1216    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9987    0.8973    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3087    1.3494    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4229    2.2183    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9794    2.8596    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.7894    2.7028    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9858    2.9763    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2813    0.6377    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.7278   -0.0560    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.2443   -0.6993    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0597   -0.5736    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5762   -1.2169    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3104   -0.8329    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.6405   -1.7923    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2774   -1.9858    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3223   -2.9300    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0212   -3.7359    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4620   -2.1115    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9455   -1.4683    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1301   -1.5940    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6136   -0.9507    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9124   -0.1817    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.0999    0.1325    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
  7 11  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  2  0  0  0  0
  5 13  1  0  0  0  0
  6 14  1  0  0  0  0
 14 15  2  0  0  0  0
  3 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 16 19  2  0  0  0  0
  2 20  1  0  0  0  0
 21 20  1  6  0  0  0
 21  4  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  2  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 24 27  2  0  0  0  0
 27 28  1  0  0  0  0
 28 29  1  0  0  0  0
 27 30  1  0  0  0  0
 30 31  2  0  0  0  0
 22 31  1  0  0  0  0
 31 32  1  0  0  0  0
 32 33  1  0  0  0  0
 33 34  1  0  0  0  0
 21 34  1  0  0  0  0
 34 35  1  0  0  0  0
M  END


  Mrv2104 03212301052D          

 35 40  0  0  1  0            999 V2000
    1.4899    2.0760    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8031    1.2767    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5721    0.9779    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5255    0.1542    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2156   -0.2979    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9522    0.0736    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6422   -0.3786    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4400   -0.1683    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.8865   -0.8621    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3647   -1.5011    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.7117   -1.2149    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8591   -1.5738    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1690   -1.1216    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9987    0.8973    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3087    1.3494    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4229    2.2183    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9794    2.8596    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.7894    2.7028    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9858    2.9763    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2813    0.6377    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.7278   -0.0560    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.2443   -0.6993    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0597   -0.5736    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5762   -1.2169    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3104   -0.8329    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.6405   -1.7923    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2774   -1.9858    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3223   -2.9300    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0212   -3.7359    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4620   -2.1115    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9455   -1.4683    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1301   -1.5940    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6136   -0.9507    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9124   -0.1817    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.0999    0.1325    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
  7 11  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  2  0  0  0  0
  5 13  1  0  0  0  0
  6 14  1  0  0  0  0
 14 15  2  0  0  0  0
  3 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 16 19  2  0  0  0  0
  2 20  1  0  0  0  0
 21 20  1  6  0  0  0
 21  4  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  2  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 24 27  2  0  0  0  0
 27 28  1  0  0  0  0
 28 29  1  0  0  0  0
 27 30  1  0  0  0  0
 30 31  2  0  0  0  0
 22 31  1  0  0  0  0
 31 32  1  0  0  0  0
 32 33  1  0  0  0  0
 33 34  1  0  0  0  0
 21 34  1  0  0  0  0
 34 35  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0351550

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC(=O)C1=CC2=C(C=CC3=C2OCO3)C2=C1C(=O)N[C@]21N(C)CCC2=CC(OC)=C(OC)C=C12

> <INCHI_IDENTIFIER>
InChI=1S/C26H24N2O7/c1-28-8-7-13-9-19(31-2)20(32-3)11-17(13)26(28)22-14-5-6-18-23(35-12-34-18)15(14)10-16(25(30)33-4)21(22)24(29)27-26/h5-6,9-11H,7-8,12H2,1-4H3,(H,27,29)/t26-/m1/s1

> <INCHI_KEY>
FTJAPUMDFMGWON-AREMUKBSSA-N

> <FORMULA>
C26H24N2O7

> <MOLECULAR_WEIGHT>
476.485

> <EXACT_MASS>
476.158351121

> <JCHEM_ACCEPTOR_COUNT>
7

> <JCHEM_ATOM_COUNT>
59

> <JCHEM_AVERAGE_POLARIZABILITY>
49.43624189816743

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
methyl (1R)-6,7-dimethoxy-2-methyl-5'-oxo-3,4-dihydro-2H-11',13'-dioxa-4'-azaspiro[isoquinoline-1,3'-tetracyclo[7.7.0.0^{2,6}.0^{10,14}]hexadecane]-1'(9'),2'(6'),7',10'(14'),15'-pentaene-7'-carboxylate

> <JCHEM_LOGP>
3.442825320666667

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
6

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
12.997431982838584

> <JCHEM_PKA_STRONGEST_BASIC>
4.830345700756835

> <JCHEM_POLAR_SURFACE_AREA>
95.56

> <JCHEM_REFRACTIVITY>
126.54299999999998

> <JCHEM_ROTATABLE_BOND_COUNT>
4

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
methyl (1R)-6,7-dimethoxy-2-methyl-5'-oxo-3,4-dihydro-11',13'-dioxa-4'-azaspiro[isoquinoline-1,3'-tetracyclo[7.7.0.0^{2,6}.0^{10,14}]hexadecane]-1'(9'),2'(6'),7',10'(14'),15'-pentaene-7'-carboxylate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 21-MAR-23   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   21-MAR-23         0                                  
HETATM    1  O   UNK     0       2.781   3.875   0.000  0.00  0.00           O+0
HETATM    2  C   UNK     0       3.366   2.383   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       4.801   1.825   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       4.714   0.288   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       6.002  -0.556   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       7.377   0.137   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       8.666  -0.707   0.000  0.00  0.00           C+0
HETATM    8  O   UNK     0      10.155  -0.314   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0      10.988  -1.609   0.000  0.00  0.00           C+0
HETATM   10  O   UNK     0      10.014  -2.802   0.000  0.00  0.00           O+0
HETATM   11  C   UNK     0       8.795  -2.268   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       7.204  -2.938   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       5.915  -2.094   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       7.464   1.675   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       6.176   2.519   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       6.389   4.141   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0       7.428   5.338   0.000  0.00  0.00           O+0
HETATM   18  C   UNK     0       8.940   5.045   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0       5.573   5.556   0.000  0.00  0.00           O+0
HETATM   20  N   UNK     0       2.392   1.190   0.000  0.00  0.00           N+0
HETATM   21  C   UNK     0       3.225  -0.105   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       4.189  -1.305   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       5.711  -1.071   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       6.676  -2.271   0.000  0.00  0.00           C+0
HETATM   25  O   UNK     0       8.046  -1.555   0.000  0.00  0.00           O+0
HETATM   26  C   UNK     0       8.662  -3.346   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       6.118  -3.707   0.000  0.00  0.00           C+0
HETATM   28  O   UNK     0       6.202  -5.469   0.000  0.00  0.00           O+0
HETATM   29  C   UNK     0       5.640  -6.974   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0       4.596  -3.942   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0       3.632  -2.741   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0       2.110  -2.975   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0       1.145  -1.775   0.000  0.00  0.00           C+0
HETATM   34  N   UNK     0       1.703  -0.339   0.000  0.00  0.00           N+0
HETATM   35  C   UNK     0       0.187   0.247   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3   20                                                  
CONECT    3    2    4   15                                                  
CONECT    4    3    5   21                                                  
CONECT    5    4    6   13                                                  
CONECT    6    5    7   14                                                  
CONECT    7    6    8   11                                                  
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11    7   10   12                                                  
CONECT   12   11   13                                                       
CONECT   13   12    5                                                       
CONECT   14    6   15                                                       
CONECT   15   14    3   16                                                  
CONECT   16   15   17   19                                                  
CONECT   17   16   18                                                       
CONECT   18   17                                                            
CONECT   19   16                                                            
CONECT   20    2   21                                                       
CONECT   21   20    4   22   34                                             
CONECT   22   21   23   31                                                  
CONECT   23   22   24                                                       
CONECT   24   23   25   27                                                  
CONECT   25   24   26                                                       
CONECT   26   25                                                            
CONECT   27   24   28   30                                                  
CONECT   28   27   29                                                       
CONECT   29   28                                                            
CONECT   30   27   31                                                       
CONECT   31   30   22   32                                                  
CONECT   32   31   33                                                       
CONECT   33   32   34                                                       
CONECT   34   33   21   35                                                  
CONECT   35   34                                                            
MASTER        0    0    0    0    0    0    0    0   35    0   80    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₆H₂₄N₂O₇

Average Mass

476.4850 Da

Monoisotopic Mass

476.15835 Da

IUPAC Name

methyl (1R)-6,7-dimethoxy-2-methyl-5'-oxo-3,4-dihydro-2H-11',13'-dioxa-4'-azaspiro[isoquinoline-1,3'-tetracyclo[7.7.0.0^{2,6}.0^{10,14}]hexadecane]-1'(9'),2'(6'),7',10'(14'),15'-pentaene-7'-carboxylate

Traditional Name

methyl (1R)-6,7-dimethoxy-2-methyl-5'-oxo-3,4-dihydro-11',13'-dioxa-4'-azaspiro[isoquinoline-1,3'-tetracyclo[7.7.0.0^{2,6}.0^{10,14}]hexadecane]-1'(9'),2'(6'),7',10'(14'),15'-pentaene-7'-carboxylate

CAS Registry Number

Not Available

SMILES

COC(=O)C1=CC2=C(C=CC3=C2OCO3)C2=C1C(=O)N[C@]21N(C)CCC2=CC(OC)=C(OC)C=C12

InChI Identifier

InChI=1S/C26H24N2O7/c1-28-8-7-13-9-19(31-2)20(32-3)11-17(13)26(28)22-14-5-6-18-23(35-12-34-18)15(14)10-16(25(30)33-4)21(22)24(29)27-26/h5-6,9-11H,7-8,12H2,1-4H3,(H,27,29)/t26-/m1/s1

InChI Key

FTJAPUMDFMGWON-AREMUKBSSA-N

Experimental Spectra

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
HSQC NMR	[¹H, ¹³C] NMR Spectrum (2D, 500 MHz, CDCl3, experimental)	[email protected]	Kunming Institute of Botany Chinese Academy of Sciences	Yu Zhang	2025-09-14	View Spectrum
ROESY NMR	[¹H, ¹H] NMR Spectrum (2D, 500 MHz, CDCl3, experimental)	[email protected]	Kunming Institute of Botany Chinese Academy of Sciences	Yu Zhang	2025-09-14	View Spectrum
COSY NMR	[¹H, ¹H] NMR Spectrum (2D, 500 MHz, CDCl3, experimental)	[email protected]	Kunming Institute of Botany Chinese Academy of Sciences	Yu Zhang	2025-09-14	View Spectrum
HMBC NMR	[¹H, ¹³C] NMR Spectrum (2D, 500 MHz, CDCl3, experimental)	[email protected]	Kunming Institute of Botany Chinese Academy of Sciences	Yu Zhang	2025-09-14	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, CDCl3, experimental)	[email protected]	Kunming Institute of Botany Chinese Academy of Sciences	Yu Zhang	2025-09-14	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, CDCl3, experimental)	[email protected]	Kunming Institute of Botany Chinese Academy of Sciences	Yu Zhang	2025-09-14	View Spectrum

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Hypecoum leptocarpum		Not Available

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.44	ChemAxon
pKa (Strongest Acidic)	13	ChemAxon
pKa (Strongest Basic)	4.83	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	7	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	95.56 Å²	ChemAxon
Rotatable Bond Count	4	ChemAxon
Refractivity	126.54 m³·mol⁻¹	ChemAxon
Polarizability	49.44 Å³	ChemAxon
Number of Rings	6	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Showing NP-Card for Hypecoleptopine E (NP0351550)

MOL for NP0351550 (Hypecoleptopine E)

3D MOL for NP0351550 (Hypecoleptopine E)

3D SDF for NP0351550 (Hypecoleptopine E)

3D-SDF for NP0351550 (Hypecoleptopine E)

PDB for NP0351550 (Hypecoleptopine E)

3D PDB for NP0351550 (Hypecoleptopine E)

SMILES for NP0351550 (Hypecoleptopine E)

INCHI for NP0351550 (Hypecoleptopine E)

Structure for NP0351550 (Hypecoleptopine E)

3D Structure for NP0351550 (Hypecoleptopine E)