Np mrd loader

Record Information
Version2.0
Created at2025-08-04 15:01:03 UTC
Updated at2025-08-28 01:00:40 UTC
NP-MRD IDNP0351407
Natural Product DOIhttps://doi.org/10.57994/4448
Secondary Accession NumbersNone
Natural Product Identification
Common NameDapalide B
DescriptionNot Available
Structure
Thumb
SynonymsNot Available
Chemical FormulaC76H133N13O25
Average Mass1628.9660 Da
Monoisotopic Mass1627.95356 Da
IUPAC NameN-[(1R,2R)-1-{[(1S,2R)-1-{[(1S,2R)-1-{[(2R)-1-[(2R)-2-{[(1S)-1-{[(1R,2S)-1-{[(3S,6S,9S,12R,15R,18R,19R)-9,12-bis[(2S)-butan-2-yl]-6-[(1R)-1-hydroxyethyl]-19-methyl-15-(2-methylpropyl)-2,5,8,11,14,17-hexaoxo-3-(propan-2-yl)-1-oxa-4,7,10,13,16-pentaazacyclononadecan-18-yl]carbamoyl}-2-methylbutyl]carbamoyl}-2-hydroxyethyl]carbamoyl}pyrrolidin-1-yl]-3-methyl-1-oxobutan-2-yl]carbamoyl}-2-hydroxypropyl]carbamoyl}-2-hydroxypropyl]carbamoyl}-2-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}propyl]octanamide
Traditional NameN-[(1R,2R)-1-{[(1S,2R)-1-{[(1S,2R)-1-{[(2R)-1-[(2R)-2-{[(1S)-1-{[(1R,2S)-1-{[(3S,6S,9S,12R,15R,18R,19R)-9,12-bis[(2S)-butan-2-yl]-6-[(1R)-1-hydroxyethyl]-3-isopropyl-19-methyl-15-(2-methylpropyl)-2,5,8,11,14,17-hexaoxo-1-oxa-4,7,10,13,16-pentaazacyclononadecan-18-yl]carbamoyl}-2-methylbutyl]carbamoyl}-2-hydroxyethyl]carbamoyl}pyrrolidin-1-yl]-3-methyl-1-oxobutan-2-yl]carbamoyl}-2-hydroxypropyl]carbamoyl}-2-hydroxypropyl]carbamoyl}-2-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}propyl]octanamide
CAS Registry NumberNot Available
SMILES
CCCCCCCC(=O)N[C@H]([C@@H](C)O[C@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1O)C(=O)N[C@@H]([C@@H](C)O)C(=O)N[C@@H]([C@@H](C)O)C(=O)N[C@H](C(C)C)C(=O)N1CCC[C@@H]1C(=O)N[C@@H](CO)C(=O)N[C@H]([C@@H](C)CC)C(=O)N[C@@H]1[C@@H](C)OC(=O)[C@@H](NC(=O)[C@@H](NC(=O)[C@@H](NC(=O)[C@H](NC(=O)[C@@H](CC(C)C)NC1=O)[C@@H](C)CC)[C@@H](C)CC)[C@@H](C)O)C(C)C
InChI Identifier
InChI=1S/C76H133N13O25/c1-19-23-24-25-26-29-49(95)79-58(44(18)113-76-62(98)61(97)60(96)48(33-91)114-76)73(109)87-57(42(16)94)71(107)86-55(40(14)92)69(105)80-50(35(7)8)74(110)89-30-27-28-47(89)65(101)78-46(32-90)64(100)83-53(38(12)21-3)68(104)88-59-43(17)112-75(111)51(36(9)10)81-70(106)56(41(15)93)85-67(103)54(39(13)22-4)84-66(102)52(37(11)20-2)82-63(99)45(31-34(5)6)77-72(59)108/h34-48,50-62,76,90-94,96-98H,19-33H2,1-18H3,(H,77,108)(H,78,101)(H,79,95)(H,80,105)(H,81,106)(H,82,99)(H,83,100)(H,84,102)(H,85,103)(H,86,107)(H,87,109)(H,88,104)/t37-,38-,39-,40+,41+,42+,43+,44+,45?,46-,47+,48+,50+,51-,52+,53+,54-,55-,56?,57-,58+,59?,60+,61-,62+,76-/m0/s1
InChI KeyAUXFTDDBTSGKIP-ZXRNFVGQSA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
HSQC NMR[1H, 13C] NMR Spectrum (2D, 600 MHz, C2D6OS, experimental)downing.ekate@ufl.eduUniversity of FloridaEmma Ellis2025-08-04View Spectrum
TOCSY NMR[1H, 1H] NMR Spectrum (2D, 600 MHz, C2D6OS, experimental)downing.ekate@ufl.eduUniversity of FloridaEmma Ellis2025-08-04View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, C2D6OS, experimental)downing.ekate@ufl.eduUniversity of FloridaEmma Ellis2025-08-04View Spectrum
TOCSY NMR[1H, 1H] NMR Spectrum (2D, 600 MHz, C2D6OS, experimental)downing.ekate@ufl.eduUniversity of FloridaEmma Ellis2025-08-04View Spectrum
1D NMR13C NMR Spectrum (1D, 150.0 MHz, C2D6OS, experimental)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
Chemical Shift Submissions
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 150.0, C2D6OS, simulated)downing.ekate@ufl.eduUniversity of FloridaEmma Ellis2025-08-20View Spectrum
Species
Species of Origin
Species NameSourceReference
Dapis sp.
      Not Available
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP-2.3ChemAxon
pKa (Strongest Acidic)11.06ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count24ChemAxon
Hydrogen Donor Count20ChemAxon
Polar Surface Area576.11 ŲChemAxon
Rotatable Bond Count38ChemAxon
Refractivity405.56 m³·mol⁻¹ChemAxon
Polarizability170.71 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References