Np mrd loader

Record Information
Version2.0
Created at2024-10-08 09:46:06 UTC
Updated at2024-10-09 19:46:32 UTC
NP-MRD IDNP0341866
Natural Product DOIhttps://doi.org/10.57994/3354
Secondary Accession NumbersNone
Natural Product Identification
Common Namesyzygioblane B
Description syzygioblane B was first documented in 2024 (PMID: 38728049).
Structure
Thumb
SynonymsNot Available
Chemical FormulaC32H40O6
Average Mass520.6660 Da
Monoisotopic Mass520.28249 Da
IUPAC Name(1S,1'S,2S,3'S,5S,6S,8'S,11'R)-5',11'-dihydroxy-8',11'-dimethyl-6-[(3S)-2-methyl-6-oxoheptan-3-yl]-3'-phenyl-2'-oxaspiro[bicyclo[3.1.0]hexane-2,9'-tricyclo[6.2.2.0^{1,6}]dodecan]-5'-ene-7',12'-dione
Traditional Name(1S,1'S,2S,3'S,5S,6S,8'S,11'R)-5',11'-dihydroxy-8',11'-dimethyl-6-[(3S)-2-methyl-6-oxoheptan-3-yl]-3'-phenyl-2'-oxaspiro[bicyclo[3.1.0]hexane-2,9'-tricyclo[6.2.2.0^{1,6}]dodecan]-5'-ene-7',12'-dione
CAS Registry NumberNot Available
SMILES
[H][C@](CCC(C)=O)(C(C)C)[C@@]1([H])[C@]2([H])CC[C@]3(C[C@]45O[C@@H](CC(O)=C4C(=O)[C@@]3(C)C(=O)[C@]5(C)O)C3=CC=CC=C3)[C@]12[H]
InChI Identifier
InChI=1S/C32H40O6/c1-17(2)20(12-11-18(3)33)24-21-13-14-31(25(21)24)16-32-26(27(35)29(31,4)28(36)30(32,5)37)22(34)15-23(38-32)19-9-7-6-8-10-19/h6-10,17,20-21,23-25,34,37H,11-16H2,1-5H3/t20-,21-,23-,24-,25-,29-,30-,31-,32-/m0/s1
InChI KeyKCZRHKFLDBGZMD-APTFGDLBSA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
oblanceolatum
      Not Available
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP4.68ChemAxon
pKa (Strongest Acidic)8.8ChemAxon
pKa (Strongest Basic)-4.1ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area100.9 ŲChemAxon
Rotatable Bond Count6ChemAxon
Refractivity143.93 m³·mol⁻¹ChemAxon
Polarizability57.74 ųChemAxon
Number of Rings6ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
External LinksNot Available
References
General References
  1. Koga N, Saito Y, Miyake K, Amuti S, Fukuyoshi S, Yoshida S, Sato S, Yamada Y, Ikeda A, Adachi N, Kawasaki M, Takasu A, Aramaki S, Senda T, Rahim A, Najib A, Alam G, Tanaka N, Nakagawa-Goto K: Cyclic Sesquiterpene-Flavanone [4+2] Hybrids, Syzygioblanes A-C, Found in an Indonesian Traditional Medicine, "Jampu Salo" (Syzygium oblanceolatum). Org Lett. 2024 May 24;26(20):4302-4307. doi: 10.1021/acs.orglett.4c01248. Epub 2024 May 10. [PubMed:38728049 ]