NP-MRD: Showing NP-Card for SM(d19:0/24:1(15Z)) (NP0341754)

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Record Information

Version

2.0

Created at

2024-09-12 10:42:40 UTC

Updated at

2024-09-12 10:42:41 UTC

NP-MRD ID

NP0341754

Secondary Accession Numbers

None

Natural Product Identification

Common Name

SM(d19:0/24:1(15Z))

Description

Not Available

Structure

MOL SDF PDB SMILES InChI

SM(d19:0/24:1(15Z))
  Mrv1652304032008062D          

 57 56  0  0  1  0            999 V2000
   -0.3173    4.3161    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.3971    4.7286    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1116    4.3161    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3099    3.4167    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.8261    4.7286    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
    2.2386    4.0142    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4136    5.4431    0.0000 O   0  5  0  0  0  0  0  0  0  0  0  0
    2.5406    5.1411    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2943    4.8056    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0088    5.2181    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7007    4.7687    0.0000 N   0  3  0  0  0  0  0  0  0  0  0  0
    5.3926    4.3194    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2514    4.0768    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1501    5.4607    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0318    4.7286    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0318    5.5000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7459    4.3155    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4601    4.7286    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1742    4.3155    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8884    4.7286    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6025    4.3155    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3167    4.7286    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0308    4.3155    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7449    4.7286    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.4590    4.3155    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.1732    4.7286    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.8873    4.3155    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.6015    4.7286    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.3156    4.3155    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.0298    4.7286    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.7439    4.3155    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -12.4580    4.7286    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0371    2.8540    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0371    2.0826    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7512    3.2671    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4654    2.8540    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1795    3.2671    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8936    2.8540    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6078    3.2671    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3219    2.8540    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0360    3.2671    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7502    2.8540    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.4643    3.2671    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.1785    2.8540    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.8926    3.2671    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.6067    2.8540    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.3209    3.2671    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.0350    2.8540    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.8600    2.8540    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -12.5742    3.2671    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -13.2883    2.8540    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -14.0025    3.2671    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -14.7166    2.8540    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -15.4307    3.2671    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -16.1448    2.8540    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -16.8590    3.2671    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -17.5731    2.8540    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  6  0  0  0
  1  4  1  0  0  0  0
  2  3  1  0  0  0  0
  3  5  1  0  0  0  0
  4 33  1  0  0  0  0
  5  6  2  0  0  0  0
  5  7  1  0  0  0  0
  5  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 11 13  1  0  0  0  0
 11 14  1  0  0  0  0
 15  1  1  0  0  0  0
 15 16  1  0  0  0  0
 15 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 27 28  1  0  0  0  0
 28 29  1  0  0  0  0
 29 30  1  0  0  0  0
 30 31  1  0  0  0  0
 31 32  1  0  0  0  0
 33 34  2  0  0  0  0
 33 35  1  0  0  0  0
 35 36  1  0  0  0  0
 36 37  1  0  0  0  0
 37 38  1  0  0  0  0
 38 39  1  0  0  0  0
 39 40  1  0  0  0  0
 40 41  1  0  0  0  0
 41 42  1  0  0  0  0
 42 43  1  0  0  0  0
 43 44  1  0  0  0  0
 44 45  1  0  0  0  0
 45 46  1  0  0  0  0
 46 47  1  0  0  0  0
 47 48  1  0  0  0  0
 48 49  2  0  0  0  0
 49 50  1  0  0  0  0
 50 51  1  0  0  0  0
 51 52  1  0  0  0  0
 52 53  1  0  0  0  0
 53 54  1  0  0  0  0
 54 55  1  0  0  0  0
 55 56  1  0  0  0  0
 56 57  1  0  0  0  0
M  CHG  2   7  -1  11   1
M  END

SM(d19:0/24:1(15Z))
  Mrv1652304032008062D          

 57 56  0  0  1  0            999 V2000
   -0.3173    4.3161    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.3971    4.7286    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1116    4.3161    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3099    3.4167    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.8261    4.7286    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
    2.2386    4.0142    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4136    5.4431    0.0000 O   0  5  0  0  0  0  0  0  0  0  0  0
    2.5406    5.1411    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2943    4.8056    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0088    5.2181    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7007    4.7687    0.0000 N   0  3  0  0  0  0  0  0  0  0  0  0
    5.3926    4.3194    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2514    4.0768    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1501    5.4607    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0318    4.7286    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0318    5.5000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7459    4.3155    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4601    4.7286    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1742    4.3155    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8884    4.7286    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6025    4.3155    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3167    4.7286    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0308    4.3155    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7449    4.7286    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.4590    4.3155    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.1732    4.7286    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.8873    4.3155    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.6015    4.7286    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.3156    4.3155    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.0298    4.7286    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.7439    4.3155    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -12.4580    4.7286    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0371    2.8540    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0371    2.0826    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7512    3.2671    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4654    2.8540    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1795    3.2671    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8936    2.8540    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6078    3.2671    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3219    2.8540    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0360    3.2671    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7502    2.8540    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.4643    3.2671    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.1785    2.8540    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.8926    3.2671    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.6067    2.8540    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.3209    3.2671    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.0350    2.8540    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.8600    2.8540    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -12.5742    3.2671    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -13.2883    2.8540    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -14.0025    3.2671    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -14.7166    2.8540    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -15.4307    3.2671    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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  -16.8590    3.2671    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -17.5731    2.8540    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  6  0  0  0
  1  4  1  0  0  0  0
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  4 33  1  0  0  0  0
  5  6  2  0  0  0  0
  5  7  1  0  0  0  0
  5  8  1  0  0  0  0
  8  9  1  0  0  0  0
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 11 12  1  0  0  0  0
 11 13  1  0  0  0  0
 11 14  1  0  0  0  0
 15  1  1  0  0  0  0
 15 16  1  0  0  0  0
 15 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 27 28  1  0  0  0  0
 28 29  1  0  0  0  0
 29 30  1  0  0  0  0
 30 31  1  0  0  0  0
 31 32  1  0  0  0  0
 33 34  2  0  0  0  0
 33 35  1  0  0  0  0
 35 36  1  0  0  0  0
 36 37  1  0  0  0  0
 37 38  1  0  0  0  0
 38 39  1  0  0  0  0
 39 40  1  0  0  0  0
 40 41  1  0  0  0  0
 41 42  1  0  0  0  0
 42 43  1  0  0  0  0
 43 44  1  0  0  0  0
 44 45  1  0  0  0  0
 45 46  1  0  0  0  0
 46 47  1  0  0  0  0
 47 48  1  0  0  0  0
 48 49  2  0  0  0  0
 49 50  1  0  0  0  0
 50 51  1  0  0  0  0
 51 52  1  0  0  0  0
 52 53  1  0  0  0  0
 53 54  1  0  0  0  0
 54 55  1  0  0  0  0
 55 56  1  0  0  0  0
 56 57  1  0  0  0  0
M  CHG  2   7  -1  11   1
M  END
> <DATABASE_ID>
NP0341754

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CCCCCCCCCCCCCCCCC(O)[C@H](COP([O-])(=O)OCC[N+](C)(C)C)NC(=O)CCCCCCCCCCCCC\C=C/CCCCCCCC

> <INCHI_IDENTIFIER>
InChI=1S/C48H97N2O6P/c1-6-8-10-12-14-16-18-20-22-23-24-25-26-27-28-30-32-34-36-38-40-42-48(52)49-46(45-56-57(53,54)55-44-43-50(3,4)5)47(51)41-39-37-35-33-31-29-21-19-17-15-13-11-9-7-2/h20,22,46-47,51H,6-19,21,23-45H2,1-5H3,(H-,49,52,53,54)/b22-20-/t46-,47?/m0/s1

> <INCHI_KEY>
LXMARZYBSFYVSY-COIKPJQISA-N

> <FORMULA>
C48H97N2O6P

> <MOLECULAR_WEIGHT>
829.286

> <EXACT_MASS>
828.708425849

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
154

> <JCHEM_AVERAGE_POLARIZABILITY>
107.04632272254241

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2-{[(2S)-3-hydroxy-2-[(15Z)-tetracos-15-enamido]nonadecyl phosphono]oxy}ethyl)trimethylazanium

> <ALOGPS_LOGP>
6.34

> <JCHEM_LOGP>
10.82126826586159

> <ALOGPS_LOGS>
-7.52

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
13.700289304676609

> <JCHEM_PKA_STRONGEST_ACIDIC>
1.8652748191161206

> <JCHEM_PKA_STRONGEST_BASIC>
-1.044531746191455

> <JCHEM_POLAR_SURFACE_AREA>
107.92000000000002

> <JCHEM_REFRACTIVITY>
255.50490000000005

> <JCHEM_ROTATABLE_BOND_COUNT>
45

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
2.69e-05 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2-{[(2S)-3-hydroxy-2-[(15Z)-tetracos-15-enamido]nonadecyl phosphono]oxy}ethyl)trimethylazanium

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 03-APR-20   NONE
TITLE     NULL                                                        
COMPND    MOLECULE: SM(d19:0/24:1(15Z))                               
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   03-APR-20         0                                  
HETATM    1  C   UNK     0      -0.592   8.057   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       0.741   8.827   0.000  0.00  0.00           C+0
HETATM    3  O   UNK     0       2.075   8.057   0.000  0.00  0.00           O+0
HETATM    4  N   UNK     0      -0.578   6.378   0.000  0.00  0.00           N+0
HETATM    5  P   UNK     0       3.409   8.827   0.000  0.00  0.00           P+0
HETATM    6  O   UNK     0       4.179   7.493   0.000  0.00  0.00           O+0
HETATM    7  O   UNK     0       2.639  10.160   0.000  0.00  0.00           O-1
HETATM    8  O   UNK     0       4.742   9.597   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0       6.149   8.970   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       7.483   9.740   0.000  0.00  0.00           C+0
HETATM   11  N   UNK     0       8.775   8.902   0.000  0.00  0.00           N+1
HETATM   12  C   UNK     0      10.066   8.063   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       7.936   7.610   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       9.614  10.193   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      -1.926   8.827   0.000  0.00  0.00           C+0
HETATM   16  O   UNK     0      -1.926  10.267   0.000  0.00  0.00           O+0
HETATM   17  C   UNK     0      -3.259   8.056   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      -4.592   8.827   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      -5.925   8.056   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      -7.258   8.827   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      -8.591   8.056   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      -9.925   8.827   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0     -11.257   8.056   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0     -12.590   8.827   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0     -13.923   8.056   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0     -15.257   8.827   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0     -16.590   8.056   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0     -17.923   8.827   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0     -19.256   8.056   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0     -20.589   8.827   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0     -21.922   8.056   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0     -23.255   8.827   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0      -1.936   5.327   0.000  0.00  0.00           C+0
HETATM   34  O   UNK     0      -1.936   3.888   0.000  0.00  0.00           O+0
HETATM   35  C   UNK     0      -3.269   6.099   0.000  0.00  0.00           C+0
HETATM   36  C   UNK     0      -4.602   5.327   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0      -5.935   6.099   0.000  0.00  0.00           C+0
HETATM   38  C   UNK     0      -7.268   5.327   0.000  0.00  0.00           C+0
HETATM   39  C   UNK     0      -8.601   6.099   0.000  0.00  0.00           C+0
HETATM   40  C   UNK     0      -9.934   5.327   0.000  0.00  0.00           C+0
HETATM   41  C   UNK     0     -11.267   6.099   0.000  0.00  0.00           C+0
HETATM   42  C   UNK     0     -12.600   5.327   0.000  0.00  0.00           C+0
HETATM   43  C   UNK     0     -13.933   6.099   0.000  0.00  0.00           C+0
HETATM   44  C   UNK     0     -15.267   5.327   0.000  0.00  0.00           C+0
HETATM   45  C   UNK     0     -16.600   6.099   0.000  0.00  0.00           C+0
HETATM   46  C   UNK     0     -17.933   5.327   0.000  0.00  0.00           C+0
HETATM   47  C   UNK     0     -19.266   6.099   0.000  0.00  0.00           C+0
HETATM   48  C   UNK     0     -20.599   5.327   0.000  0.00  0.00           C+0
HETATM   49  C   UNK     0     -22.139   5.327   0.000  0.00  0.00           C+0
HETATM   50  C   UNK     0     -23.472   6.099   0.000  0.00  0.00           C+0
HETATM   51  C   UNK     0     -24.805   5.327   0.000  0.00  0.00           C+0
HETATM   52  C   UNK     0     -26.138   6.099   0.000  0.00  0.00           C+0
HETATM   53  C   UNK     0     -27.471   5.327   0.000  0.00  0.00           C+0
HETATM   54  C   UNK     0     -28.804   6.099   0.000  0.00  0.00           C+0
HETATM   55  C   UNK     0     -30.137   5.327   0.000  0.00  0.00           C+0
HETATM   56  C   UNK     0     -31.470   6.099   0.000  0.00  0.00           C+0
HETATM   57  C   UNK     0     -32.803   5.327   0.000  0.00  0.00           C+0
CONECT    1    2    4   15                                                  
CONECT    2    1    3                                                       
CONECT    3    2    5                                                       
CONECT    4    1   33                                                       
CONECT    5    3    6    7    8                                             
CONECT    6    5                                                            
CONECT    7    5                                                            
CONECT    8    5    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12   13   14                                             
CONECT   12   11                                                            
CONECT   13   11                                                            
CONECT   14   11                                                            
CONECT   15    1   16   17                                                  
CONECT   16   15                                                            
CONECT   17   15   18                                                       
CONECT   18   17   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   21                                                       
CONECT   21   20   22                                                       
CONECT   22   21   23                                                       
CONECT   23   22   24                                                       
CONECT   24   23   25                                                       
CONECT   25   24   26                                                       
CONECT   26   25   27                                                       
CONECT   27   26   28                                                       
CONECT   28   27   29                                                       
CONECT   29   28   30                                                       
CONECT   30   29   31                                                       
CONECT   31   30   32                                                       
CONECT   32   31                                                            
CONECT   33    4   34   35                                                  
CONECT   34   33                                                            
CONECT   35   33   36                                                       
CONECT   36   35   37                                                       
CONECT   37   36   38                                                       
CONECT   38   37   39                                                       
CONECT   39   38   40                                                       
CONECT   40   39   41                                                       
CONECT   41   40   42                                                       
CONECT   42   41   43                                                       
CONECT   43   42   44                                                       
CONECT   44   43   45                                                       
CONECT   45   44   46                                                       
CONECT   46   45   47                                                       
CONECT   47   46   48                                                       
CONECT   48   47   49                                                       
CONECT   49   48   50                                                       
CONECT   50   49   51                                                       
CONECT   51   50   52                                                       
CONECT   52   51   53                                                       
CONECT   53   52   54                                                       
CONECT   54   53   55                                                       
CONECT   55   54   56                                                       
CONECT   56   55   57                                                       
CONECT   57   56                                                            
MASTER        0    0    0    0    0    0    0    0   57    0  112    0
END

View in JSmol

Synonyms

Value	Source
Sphingomyelin	MetBuilder
N-(15Z-Tetracosenoyl)-1-phosphocholine-nonadecasphinganine	MetBuilder
Sphingomyelin(D19:0/24:1(15Z))	MetBuilder
N-(15Z-Tetracosenoyl)-1-phosphocholine-nonadecadihydrosphingosine	MetBuilder
N-(15Z-Tetracosenoyl)-1-phosphocholine-nonadecad-erythro-sphinganine	MetBuilder

Chemical Formula

C₄₈H₉₇N₂O₆P

Average Mass

829.2860 Da

Monoisotopic Mass

828.70843 Da

IUPAC Name

(2-{[(2S)-3-hydroxy-2-[(15Z)-tetracos-15-enamido]nonadecyl phosphono]oxy}ethyl)trimethylazanium

Traditional Name

(2-{[(2S)-3-hydroxy-2-[(15Z)-tetracos-15-enamido]nonadecyl phosphono]oxy}ethyl)trimethylazanium

CAS Registry Number

Not Available

SMILES

CCCCCCCCCCCCCCCCC(O)[C@H](COP([O-])(=O)OCC[N+](C)(C)C)NC(=O)CCCCCCCCCCCCC\C=C/CCCCCCCC

InChI Identifier

InChI=1S/C48H97N2O6P/c1-6-8-10-12-14-16-18-20-22-23-24-25-26-27-28-30-32-34-36-38-40-42-48(52)49-46(45-56-57(53,54)55-44-43-50(3,4)5)47(51)41-39-37-35-33-31-29-21-19-17-15-13-11-9-7-2/h20,22,46-47,51H,6-19,21,23-45H2,1-5H3,(H-,49,52,53,54)/b22-20-/t46-,47?/m0/s1

InChI Key

LXMARZYBSFYVSY-COIKPJQISA-N

Experimental Spectra

Not Available

Predicted Spectra

Not Available

Chemical Shift Submissions

Not Available

Species

Species of Origin

Not Available

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	6.34	ALOGPS
logP	10.82	ChemAxon
logS	-7.5	ALOGPS
pKa (Strongest Acidic)	1.87	ChemAxon
pKa (Strongest Basic)	-1	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	107.92 Å²	ChemAxon
Rotatable Bond Count	45	ChemAxon
Refractivity	255.5 m³·mol⁻¹	ChemAxon
Polarizability	107.05 Å³	ChemAxon
Number of Rings	0	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Showing NP-Card for SM(d19:0/24:1(15Z)) (NP0341754)

MOL for NP0341754 (SM(d19:0/24:1(15Z)))

3D MOL for NP0341754 (SM(d19:0/24:1(15Z)))

3D SDF for NP0341754 (SM(d19:0/24:1(15Z)))

3D-SDF for NP0341754 (SM(d19:0/24:1(15Z)))

PDB for NP0341754 (SM(d19:0/24:1(15Z)))

3D PDB for NP0341754 (SM(d19:0/24:1(15Z)))

SMILES for NP0341754 (SM(d19:0/24:1(15Z)))

INCHI for NP0341754 (SM(d19:0/24:1(15Z)))

Structure for NP0341754 (SM(d19:0/24:1(15Z)))

3D Structure for NP0341754 (SM(d19:0/24:1(15Z)))