Np mrd loader

Record Information
Version2.0
Created at2024-09-12 00:07:56 UTC
Updated at2024-09-12 00:07:56 UTC
NP-MRD IDNP0339902
Secondary Accession NumbersNone
Natural Product Identification
Common NameGDP-guluronate
DescriptionGDP-guluronate belongs to the class of organic compounds known as purine ribonucleoside diphosphates. These are purine ribobucleotides with diphosphate group linked to the ribose moiety. Based on a literature review very few articles have been published on GDP-guluronate.
Structure
Thumb
Synonyms
ValueSource
GDP-Guluronic acidGenerator
Chemical FormulaC16H21N5O17P2
Average Mass617.3110 Da
Monoisotopic Mass617.04187 Da
IUPAC Name({[5-(2-amino-6-oxo-6,9-dihydro-1H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl phosphonato}oxy)[(2,3,4,5-tetrahydroxy-6-oxohexanoyl)oxy]phosphinate
Traditional Name{[5-(2-amino-6-oxo-1H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl phosphonato}oxy((2,3,4,5-tetrahydroxy-6-oxohexanoyl)oxy)phosphinate
CAS Registry NumberNot Available
SMILES
NC1=NC2=C(N=CN2C2OC(COP([O-])(=O)OP([O-])(=O)OC(=O)C(O)C(O)C(O)C(O)C=O)C(O)C2O)C(=O)N1
InChI Identifier
InChI=1/C16H23N5O17P2/c17-16-19-12-6(13(29)20-16)18-3-21(12)14-10(27)8(25)5(36-14)2-35-39(31,32)38-40(33,34)37-15(30)11(28)9(26)7(24)4(23)1-22/h1,3-5,7-11,14,23-28H,2H2,(H,31,32)(H,33,34)(H3,17,19,20,29)/p-2
InChI KeyJMGRTSWUCIVEIG-UHFFFAOYNA-L
Experimental Spectra
Not Available
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of OriginNot Available
Chemical Taxonomy
DescriptionThis compound belongs to the class of organic compounds known as purine ribonucleoside diphosphates. These are purine ribobucleotides with diphosphate group linked to the ribose moiety.
KingdomOrganic compounds
Super ClassNucleosides, nucleotides, and analogues
ClassPurine nucleotides
Sub ClassPurine ribonucleotides
Direct ParentPurine ribonucleoside diphosphates
Alternative Parents
Substituents
  • Purine ribonucleoside diphosphate
  • Purine ribonucleoside monophosphate
  • Pentose-5-phosphate
  • Pentose phosphate
  • Glucuronic acid or derivatives
  • Glycosyl compound
  • N-glycosyl compound
  • Hypoxanthine
  • Monosaccharide phosphate
  • Organic pyrophosphate
  • 6-oxopurine
  • Imidazopyrimidine
  • Purine
  • Beta-hydroxy acid
  • Aminopyrimidine
  • Acyl phosphate
  • Pyrimidone
  • Beta-hydroxy aldehyde
  • Hydroxy acid
  • Monosaccharide
  • N-substituted imidazole
  • Organic phosphoric acid derivative
  • Phosphoric acid ester
  • Alkyl phosphate
  • Pyrimidine
  • Alpha-hydroxyaldehyde
  • Tetrahydrofuran
  • Azole
  • Heteroaromatic compound
  • Vinylogous amide
  • Imidazole
  • Secondary alcohol
  • Amino acid or derivatives
  • Carboxylic acid salt
  • Lactam
  • Polyol
  • Carboxylic acid derivative
  • Oxacycle
  • Azacycle
  • Monocarboxylic acid or derivatives
  • Organoheterocyclic compound
  • Hydrocarbon derivative
  • Aldehyde
  • Organooxygen compound
  • Carbonyl group
  • Organic nitrogen compound
  • Organic oxide
  • Amine
  • Organic salt
  • Alcohol
  • Organonitrogen compound
  • Organic oxygen compound
  • Organopnictogen compound
  • Primary amine
  • Organic anion
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP-6.1ChemAxon
pKa (Strongest Acidic)1.27ChemAxon
pKa (Strongest Basic)-3.7ChemAxon
Physiological Charge-2ChemAxon
Hydrogen Acceptor Count17ChemAxon
Hydrogen Donor Count8ChemAxon
Polar Surface Area358 ŲChemAxon
Rotatable Bond Count13ChemAxon
Refractivity117.84 m³·mol⁻¹ChemAxon
Polarizability50.71 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General ReferencesNot Available