NP-MRD: Showing NP-Card for Stigmasta-7,24(28)-dien-3-ol (NP0338657)

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Record Information

Version

2.0

Created at

2024-09-11 16:46:02 UTC

Updated at

2024-09-11 16:46:02 UTC

NP-MRD ID

NP0338657

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Stigmasta-7,24(28)-dien-3-ol

Description

Based on a literature review very few articles have been published on (3b,5a,24(28)E)-Stigmasta-7,24(28)-dien-3-ol.

Structure

MOL SDF PDB SMILES InChI


  Mrv2104 05262319172D          

 30 33  0  0  0  0            999 V2000
    1.6936    1.5536    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2755    0.9717    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0565    1.1378    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3076    1.9351    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1106    2.1204    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8618   -1.7058    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5796   -2.1204    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2987   -1.7058    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0056   -2.1136    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7262   -1.6976    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7262   -0.8659    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0056   -0.4487    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2987   -0.8741    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2987   -0.0507    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3294    1.9709    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9113    1.3889    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6422    0.5970    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1212   -0.0713    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6340   -0.7355    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1496   -0.4734    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8618   -0.8852    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5796   -0.4583    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5796    0.3568    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8577    0.7727    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1496    0.3473    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0521    1.1665    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4317    0.7302    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6397    0.5546    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3886   -0.2428    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4317   -2.1052    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  1 16  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  3 28  1  0  0  0  0
  4  5  1  0  0  0  0
  6  7  1  0  0  0  0
  6 21  2  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  8 13  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 10 30  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 13 22  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 17 25  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 20 25  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 27 28  1  0  0  0  0
 28 29  1  0  0  0  0
M  END


  Mrv2104 05262319172D          

 30 33  0  0  0  0            999 V2000
    1.6936    1.5536    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2755    0.9717    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0565    1.1378    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3076    1.9351    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1106    2.1204    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8618   -1.7058    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5796   -2.1204    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2987   -1.7058    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0056   -2.1136    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7262   -1.6976    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7262   -0.8659    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0056   -0.4487    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2987   -0.8741    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2987   -0.0507    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3294    1.9709    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9113    1.3889    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6422    0.5970    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1212   -0.0713    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6340   -0.7355    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1496   -0.4734    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8618   -0.8852    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5796   -0.4583    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5796    0.3568    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8577    0.7727    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1496    0.3473    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0521    1.1665    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4317    0.7302    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6397    0.5546    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3886   -0.2428    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4317   -2.1052    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  1 16  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  3 28  1  0  0  0  0
  4  5  1  0  0  0  0
  6  7  1  0  0  0  0
  6 21  2  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  8 13  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 10 30  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 13 22  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 17 25  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 20 25  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 27 28  1  0  0  0  0
 28 29  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0338657

> <DATABASE_NAME>
NP-MRD

> <SMILES>
C\C=C(\CCC(C)C1CCC2C3=CCC4CC(O)CCC4(C)C3CCC12C)C(C)C

> <INCHI_IDENTIFIER>
InChI=1/C29H48O/c1-7-21(19(2)3)9-8-20(4)25-12-13-26-24-11-10-22-18-23(30)14-16-28(22,5)27(24)15-17-29(25,26)6/h7,11,19-20,22-23,25-27,30H,8-10,12-18H2,1-6H3/b21-7-

> <INCHI_KEY>
MCWVPSBQQXUCTB-YXSASFKJNA-N

> <FORMULA>
C29H48O

> <MOLECULAR_WEIGHT>
412.702

> <EXACT_MASS>
412.370516166

> <JCHEM_ACCEPTOR_COUNT>
1

> <JCHEM_ATOM_COUNT>
78

> <JCHEM_AVERAGE_POLARIZABILITY>
52.70927929444566

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
9a,11a-dimethyl-1-[(5Z)-5-(propan-2-yl)hept-5-en-2-yl]-1H,2H,3H,3aH,5H,5aH,6H,7H,8H,9H,9aH,9bH,10H,11H,11aH-cyclopenta[a]phenanthren-7-ol

> <JCHEM_LOGP>
7.4388973106666665

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
18.361777845540015

> <JCHEM_PKA_STRONGEST_BASIC>
-1.3283583703607977

> <JCHEM_POLAR_SURFACE_AREA>
20.23

> <JCHEM_REFRACTIVITY>
130.6161

> <JCHEM_ROTATABLE_BOND_COUNT>
5

> <JCHEM_RULE_OF_FIVE>
0

> <JCHEM_TRADITIONAL_IUPAC>
1-[(5Z)-5-isopropylhept-5-en-2-yl]-9a,11a-dimethyl-1H,2H,3H,3aH,5H,5aH,6H,7H,8H,9H,9bH,10H,11H-cyclopenta[a]phenanthren-7-ol

> <JCHEM_VEBER_RULE>
1

$$$$

HEADER    PROTEIN                                 26-MAY-23   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   26-MAY-23         0                                  
HETATM    1  C   UNK     0       3.161   2.900   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       4.248   1.814   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       5.705   2.124   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       6.174   3.612   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       7.673   3.958   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -1.609  -3.184   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      -2.949  -3.958   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      -4.291  -3.184   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      -5.610  -3.945   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      -6.956  -3.169   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      -6.956  -1.616   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      -5.610  -0.838   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      -4.291  -1.632   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      -4.291  -0.095   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       0.615   3.679   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       1.701   2.593   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       1.199   1.114   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       2.093  -0.133   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       1.183  -1.373   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      -0.279  -0.884   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      -1.609  -1.652   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      -2.949  -0.855   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      -2.949   0.666   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      -1.601   1.442   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      -0.279   0.648   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0      -0.097   2.177   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       8.273   1.363   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0       6.794   1.035   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       6.325  -0.453   0.000  0.00  0.00           C+0
HETATM   30  O   UNK     0      -8.273  -3.930   0.000  0.00  0.00           O+0
CONECT    1    2   16                                                       
CONECT    2    1    3                                                       
CONECT    3    2    4   28                                                  
CONECT    4    3    5                                                       
CONECT    5    4                                                            
CONECT    6    7   21                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9   13                                                  
CONECT    9    8   10                                                       
CONECT   10    9   11   30                                                  
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13    8   12   14   22                                             
CONECT   14   13                                                            
CONECT   15   16                                                            
CONECT   16    1   15   17                                                  
CONECT   17   16   18   25                                                  
CONECT   18   17   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   21   25                                                  
CONECT   21    6   20   22                                                  
CONECT   22   13   21   23                                                  
CONECT   23   22   24                                                       
CONECT   24   23   25                                                       
CONECT   25   17   20   24   26                                             
CONECT   26   25                                                            
CONECT   27   28                                                            
CONECT   28    3   27   29                                                  
CONECT   29   28                                                            
CONECT   30   10                                                            
MASTER        0    0    0    0    0    0    0    0   30    0   66    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₉H₄₈O

Average Mass

412.7020 Da

Monoisotopic Mass

412.37052 Da

IUPAC Name

9a,11a-dimethyl-1-[(5Z)-5-(propan-2-yl)hept-5-en-2-yl]-1H,2H,3H,3aH,5H,5aH,6H,7H,8H,9H,9aH,9bH,10H,11H,11aH-cyclopenta[a]phenanthren-7-ol

Traditional Name

1-[(5Z)-5-isopropylhept-5-en-2-yl]-9a,11a-dimethyl-1H,2H,3H,3aH,5H,5aH,6H,7H,8H,9H,9bH,10H,11H-cyclopenta[a]phenanthren-7-ol

CAS Registry Number

Not Available

SMILES

C\C=C(\CCC(C)C1CCC2C3=CCC4CC(O)CCC4(C)C3CCC12C)C(C)C

InChI Identifier

InChI=1/C29H48O/c1-7-21(19(2)3)9-8-20(4)25-12-13-26-24-11-10-22-18-23(30)14-16-28(22,5)27(24)15-17-29(25,26)6/h7,11,19-20,22-23,25-27,30H,8-10,12-18H2,1-6H3/b21-7-

InChI Key

MCWVPSBQQXUCTB-YXSASFKJNA-N

Experimental Spectra

Not Available

Predicted Spectra

Not Available

Chemical Shift Submissions

Not Available

Species

Species of Origin

Not Available

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	7.44	ChemAxon
pKa (Strongest Acidic)	18.36	ChemAxon
pKa (Strongest Basic)	-1.3	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	1	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	20.23 Å²	ChemAxon
Rotatable Bond Count	5	ChemAxon
Refractivity	130.62 m³·mol⁻¹	ChemAxon
Polarizability	52.71 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	Yes	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Not Available

Showing NP-Card for Stigmasta-7,24(28)-dien-3-ol (NP0338657)

MOL for NP0338657 (Stigmasta-7,24(28)-dien-3-ol)

3D MOL for NP0338657 (Stigmasta-7,24(28)-dien-3-ol)

3D SDF for NP0338657 (Stigmasta-7,24(28)-dien-3-ol)

3D-SDF for NP0338657 (Stigmasta-7,24(28)-dien-3-ol)

PDB for NP0338657 (Stigmasta-7,24(28)-dien-3-ol)

3D PDB for NP0338657 (Stigmasta-7,24(28)-dien-3-ol)

SMILES for NP0338657 (Stigmasta-7,24(28)-dien-3-ol)

INCHI for NP0338657 (Stigmasta-7,24(28)-dien-3-ol)

Structure for NP0338657 (Stigmasta-7,24(28)-dien-3-ol)

3D Structure for NP0338657 (Stigmasta-7,24(28)-dien-3-ol)