Np mrd loader

Record Information
Version2.0
Created at2024-09-09 20:42:11 UTC
Updated at2024-09-09 20:42:11 UTC
NP-MRD IDNP0333823
Secondary Accession NumbersNone
Natural Product Identification
Common NameNisin A
DescriptionFood preservative, especies for cheese. Active against Gram-positive bacteria - particularly Clostridium and Bacillus (the antibacterial action applies to both spores and vegetative cells), but also Listeria monocytogenes and lactic acid bacteria. Nisin does not affect Gram-negative bacteria, yeasts and moulds. It has been used for over 50 years commercially as a food preservative without any evidence of bacterial resistance [DFC].
Structure
Thumb
SynonymsNot Available
Chemical FormulaC143H230N42O37S7
Average Mass3354.0900 Da
Monoisotopic Mass3351.54520 Da
IUPAC Name6-amino-2-[(Z)-{2-[(Z)-{2-[(Z)-{2-[(Z)-{2-[(Z)-{2-[(Z)-{[(5E,12E,15Z,21E)-7-[(Z)-{6-amino-2-[(Z)-{2-[(Z)-{2-[(Z)-{[(4E,7Z,10Z,13Z,16E,19E)-21-[(Z)-{6-amino-2-[(E)-({10-[(Z)-{[(4E,7E,10Z,13E)-15-[(Z)-[(2E)-2-[(Z)-(2-amino-1-hydroxy-3-methylpentylidene)amino]-1-hydroxybut-2-en-1-ylidene]amino]-12-(butan-2-yl)-5,8,11,14-tetrahydroxy-9-methylidene-6-(2-methylpropyl)-1-thia-4,7,10,13-tetraazacyclohexadeca-4,7,10,13-tetraen-3-yl](hydroxy)methylidene}amino]-1,4-dihydroxy-9-methyl-11-oxo-3H,6H,7H,9H,10H,13H,14H,15H,15aH-pyrrolo[2,1-i]1-thia-4,7,10-triazacyclotridecan-6-yl}(hydroxy)methylidene)amino]-1-hydroxyhexylidene}amino]-5,8,11,14,17,20-hexahydroxy-15,22-dimethyl-12-(2-methylpropyl)-9-[2-(methylsulfanyl)ethyl]-1-thia-4,7,10,13,16,19-hexaazacyclodocosa-4,7,10,13,16,19-hexaen-3-yl](hydroxy)methylidene}amino]-1-hydroxy-3-(C-hydroxycarbonimidoyl)propylidene}amino]-1-hydroxy-4-(methylsulfanyl)butylidene}amino]-1-hydroxyhexylidene}amino]-3,6,12,15,21-pentahydroxy-14-[(1H-imidazol-5-yl)methyl]-4,8,20-trimethyl-9,19-dithia-2,5,13,16,22-pentaazabicyclo[9.9.2]docosa-2,5,12,15,21-pentaen-17-yl](hydroxy)methylidene}amino]-1,3-dihydroxypropylidene}amino]-1-hydroxy-3-methylpentylidene}amino]-1-hydroxy-3-(1H-imidazol-5-yl)propylidene}amino]-1-hydroxy-3-methylbutylidene}amino]-1-hydroxyprop-2-en-1-ylidene}amino]hexanoic acid
Traditional Name6-amino-2-[(Z)-{2-[(Z)-{2-[(Z)-{2-[(Z)-{2-[(Z)-{2-[(Z)-{[(5E,12E,15Z,21E)-7-[(Z)-{6-amino-2-[(Z)-{2-[(Z)-{2-[(Z)-{[(4E,7Z,10Z,13Z,16E,19E)-21-[(Z)-{6-amino-2-[(E)-({10-[(Z)-{[(4E,7E,10Z,13E)-15-[(Z)-[(2E)-2-[(Z)-(2-amino-1-hydroxy-3-methylpentylidene)amino]-1-hydroxybut-2-en-1-ylidene]amino]-5,8,11,14-tetrahydroxy-9-methylidene-6-(2-methylpropyl)-12-(sec-butyl)-1-thia-4,7,10,13-tetraazacyclohexadeca-4,7,10,13-tetraen-3-yl](hydroxy)methylidene}amino]-1,4-dihydroxy-9-methyl-11-oxo-3H,6H,7H,9H,10H,13H,14H,15H,15aH-pyrrolo[2,1-i]1-thia-4,7,10-triazacyclotridecan-6-yl}(hydroxy)methylidene)amino]-1-hydroxyhexylidene}amino]-5,8,11,14,17,20-hexahydroxy-15,22-dimethyl-12-(2-methylpropyl)-9-[2-(methylsulfanyl)ethyl]-1-thia-4,7,10,13,16,19-hexaazacyclodocosa-4,7,10,13,16,19-hexaen-3-yl](hydroxy)methylidene}amino]-1-hydroxy-3-(C-hydroxycarbonimidoyl)propylidene}amino]-1-hydroxy-4-(methylsulfanyl)butylidene}amino]-1-hydroxyhexylidene}amino]-3,6,12,15,21-pentahydroxy-14-(3H-imidazol-4-ylmethyl)-4,8,20-trimethyl-9,19-dithia-2,5,13,16,22-pentaazabicyclo[9.9.2]docosa-2,5,12,15,21-pentaen-17-yl](hydroxy)methylidene}amino]-1,3-dihydroxypropylidene}amino]-1-hydroxy-3-methylpentylidene}amino]-1-hydroxy-3-(3H-imidazol-4-yl)propylidene}amino]-1-hydroxy-3-methylbutylidene}amino]-1-hydroxyprop-2-en-1-ylidene}amino]hexanoic acid
CAS Registry NumberNot Available
SMILES
[H]\C(C)=C(/N=C(\O)C(N)C(C)CC)\C(\O)=N\C1CSCC(\N=C(O)/C(CC(C)C)\N=C(O)/C(=C)/N=C(O)/C(\N=C1\O)C(C)CC)C(\O)=N\C1C(C)SCC(\N=C(O)\C\N=C(O)\C2CCCN2C1=O)C(\O)=N/C(CCCCN)C(\O)=N\C1C(C)SCC(\N=C(O)/C\N=C(O)\C(CCSC)\N=C(O)\C(CC(C)C)\N=C(O)\C(C)\N=C(O)/C\N=C1\O)C(\O)=N\C(CC(O)=N)C(\O)=N\C(CCSC)C(\O)=N\C(CCCCN)C(\O)=N\C1C(C)SCC2N=C(O)C(N=C(O)C(C)\N=C1\O)C(C)SCC(\N=C(O)\C(CC1=CN=CN1)\N=C2\O)C(\O)=N\C(CO)C(\O)=N\C(C(C)CC)C(\O)=N\C(CC1=CN=CN1)C(\O)=N\C(C(C)C)C(\O)=N\C(=C)C(\O)=N\C(CCCCN)C(O)=O
InChI Identifier
InChI=1/C143H230N42O37S7/c1-24-69(11)105(148)135(213)162-82(27-4)118(196)174-94-58-225-59-95(175-123(201)89(48-67(7)8)169-115(193)74(16)158-138(216)107(70(12)25-2)180-132(94)210)133(211)184-112-79(21)229-61-96(160-104(190)56-152-134(212)100-38-34-44-185(100)142(112)220)128(206)164-84(36-29-32-42-145)120(198)182-109-76(18)226-60-97(161-103(189)55-151-117(195)85(39-45-223-22)165-122(200)88(47-66(5)6)168-113(191)72(14)156-102(188)54-153-136(109)214)129(207)171-92(51-101(147)187)125(203)166-86(40-46-224-23)119(197)163-83(35-28-31-41-144)121(199)183-110-77(19)228-63-99-130(208)170-90(49-80-52-149-64-154-80)124(202)176-98(62-227-78(20)111(141(219)177-99)181-116(194)75(17)159-140(110)218)131(209)173-93(57-186)127(205)179-108(71(13)26-3)139(217)172-91(50-81-53-150-65-155-81)126(204)178-106(68(9)10)137(215)157-73(15)114(192)167-87(143(221)222)37-30-33-43-146/h27,52-53,64-72,75-79,83-100,105-112,186H,15-16,24-26,28-51,54-63,144-146,148H2,1-14,17-23H3,(H2,147,187)(H,149,154)(H,150,155)(H,151,195)(H,152,212)(H,153,214)(H,156,188)(H,157,215)(H,158,216)(H,159,218)(H,160,190)(H,161,189)(H,162,213)(H,163,197)(H,164,206)(H,165,200)(H,166,203)(H,167,192)(H,168,191)(H,169,193)(H,170,208)(H,171,207)(H,172,217)(H,173,209)(H,174,196)(H,175,201)(H,176,202)(H,177,219)(H,178,204)(H,179,205)(H,180,210)(H,181,194)(H,182,198)(H,183,199)(H,184,211)(H,221,222)/b82-27+
InChI KeyNVNLLIYOARQCIX-JADBQDFBNA-N
Experimental Spectra
Not Available
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of OriginNot Available
Chemical Taxonomy
DescriptionThis compound belongs to the class of organic compounds known as polypeptides. These are peptides containing ten or more amino acid residues.
KingdomOrganic compounds
Super ClassOrganic Polymers
ClassPolypeptides
Sub ClassNot Available
Direct ParentPolypeptides
Alternative Parents
Substituents
  • Polypeptide
  • Cyclic alpha peptide
  • Histidine or derivatives
  • Isoleucine or derivatives
  • Asparagine or derivatives
  • Methionine or derivatives
  • Valine or derivatives
  • N-acyl-alpha amino acid or derivatives
  • N-acyl-alpha-amino acid
  • Macrolactam
  • Alpha-amino acid amide
  • Serine or derivatives
  • N-substituted-alpha-amino acid
  • Alpha-amino acid or derivatives
  • Medium-chain fatty acid
  • Imidazolyl carboxylic acid derivative
  • Heterocyclic fatty acid
  • Branched fatty acid
  • Hydroxy fatty acid
  • Amino fatty acid
  • Fatty amide
  • Fatty acyl
  • N-acyl-amine
  • Tertiary carboxylic acid amide
  • Pyrrolidine
  • Azole
  • Heteroaromatic compound
  • Imidazole
  • Primary carboxylic acid amide
  • Secondary carboxylic acid amide
  • Amino acid or derivatives
  • Amino acid
  • Carboxamide group
  • Lactam
  • Thioether
  • Sulfenyl compound
  • Carboxylic acid derivative
  • Carboxylic acid
  • Azacycle
  • Monocarboxylic acid or derivatives
  • Organoheterocyclic compound
  • Dialkylthioether
  • Organic oxide
  • Organosulfur compound
  • Primary alcohol
  • Carbonyl group
  • Hydrocarbon derivative
  • Primary amine
  • Organic oxygen compound
  • Alcohol
  • Amine
  • Organic nitrogen compound
  • Organooxygen compound
  • Organonitrogen compound
  • Primary aliphatic amine
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP11.65ChemAxon
pKa (Strongest Acidic)2.51ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count76ChemAxon
Hydrogen Donor Count42ChemAxon
Polar Surface Area1326.24 ŲChemAxon
Rotatable Bond Count67ChemAxon
Refractivity874.73 m³·mol⁻¹ChemAxon
Polarizability348.36 ųChemAxon
Number of Rings8ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Guo L, Kuipers OP, Broos J: An Engineered Nisin Analogue with a Hydrophobic Moiety Attached at Position 17 Selectively Inhibits Enterococcus faecium Strains. ACS Chem Biol. 2024 Sep 20;19(9):2023-2031. doi: 10.1021/acschembio.4c00337. Epub 2024 Sep 10. [PubMed:39254256 ]