NP-MRD: Showing NP-Card for maydisen C (NP0333775)

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Record Information

Version

2.0

Created at

2024-09-05 09:57:51 UTC

Updated at

2024-11-01 00:18:11 UTC

NP-MRD ID

NP0333775

Natural Product DOI

https://doi.org/10.57994/3254

Secondary Accession Numbers

None

Natural Product Identification

Common Name

maydisen C

Description

Maydisen C belongs to the class of organic compounds known as sesterterpenoids. These are terpenes composed of five consecutive isoprene units. Based on a literature review very few articles have been published on maydisen C.

Structure

MOL SDF PDB SMILES InChI


  Mrv2104 05202312302D          

 29 30  0  0  1  0            999 V2000
    5.2388    3.5353    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3540    2.7183    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1190    2.4096    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2342    1.5927    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5478    1.0062    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.8314    1.4154    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.4049    0.1937    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9783   -0.3995    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5880    0.0785    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2261    0.8199    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7041    2.2101    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9390    2.5189    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2891    2.0107    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.0892    2.8111    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4043    1.1937    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.0651    1.6877    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6630    0.8318    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.5200    0.0192    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.1523   -0.5108    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0094   -1.3233    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6416   -1.8533    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4987   -2.6659    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7235   -2.9484    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1309   -3.1959    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9060   -2.9134    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7449   -0.2633    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8741    0.5902    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0896    1.4250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4766    2.1536    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  5  4  1  0  0  0  0
  5  6  1  1  0  0  0
  5  7  1  0  0  0  0
  7  8  1  0  0  0  0
  7  9  2  0  0  0  0
  9 10  1  0  0  0  0
  2 11  2  0  0  0  0
 11 12  1  0  0  0  0
 13 12  1  0  0  0  0
 13 14  1  1  0  0  0
 15 13  1  0  0  0  0
 15 10  1  0  0  0  0
 15 16  1  6  0  0  0
 15 17  1  0  0  0  0
 17 18  1  1  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  2  0  0  0  0
 22 23  1  0  0  0  0
 22 24  1  0  0  0  0
 24 25  2  0  0  0  0
 18 26  1  6  0  0  0
 17 27  1  6  0  0  0
 17 28  1  0  0  0  0
 28 29  1  0  0  0  0
 13 29  1  0  0  0  0
M  END


  Mrv2104 05202312302D          

 29 30  0  0  1  0            999 V2000
    5.2388    3.5353    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3540    2.7183    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1190    2.4096    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2342    1.5927    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5478    1.0062    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.8314    1.4154    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.4049    0.1937    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9783   -0.3995    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5880    0.0785    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2261    0.8199    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7041    2.2101    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9390    2.5189    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2891    2.0107    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.0892    2.8111    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4043    1.1937    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.0651    1.6877    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6630    0.8318    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.5200    0.0192    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.1523   -0.5108    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0094   -1.3233    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6416   -1.8533    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4987   -2.6659    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7235   -2.9484    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1309   -3.1959    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9060   -2.9134    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7449   -0.2633    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8741    0.5902    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0896    1.4250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4766    2.1536    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  5  4  1  0  0  0  0
  5  6  1  1  0  0  0
  5  7  1  0  0  0  0
  7  8  1  0  0  0  0
  7  9  2  0  0  0  0
  9 10  1  0  0  0  0
  2 11  2  0  0  0  0
 11 12  1  0  0  0  0
 13 12  1  0  0  0  0
 13 14  1  1  0  0  0
 15 13  1  0  0  0  0
 15 10  1  0  0  0  0
 15 16  1  6  0  0  0
 15 17  1  0  0  0  0
 17 18  1  1  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  2  0  0  0  0
 22 23  1  0  0  0  0
 22 24  1  0  0  0  0
 24 25  2  0  0  0  0
 18 26  1  6  0  0  0
 17 27  1  6  0  0  0
 17 28  1  0  0  0  0
 28 29  1  0  0  0  0
 13 29  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0333775

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H][C@@]1(CC[C@]2(C)C\C=C(C)\CC[C@H](O)\C(C)=C/C[C@@]12[H])[C@@H](C)CC\C=C(/C)C=O

> <INCHI_IDENTIFIER>
InChI=1S/C25H40O2/c1-18-9-12-24(27)21(4)10-11-23-22(14-16-25(23,5)15-13-18)20(3)8-6-7-19(2)17-26/h7,10,13,17,20,22-24,27H,6,8-9,11-12,14-16H2,1-5H3/b18-13+,19-7+,21-10-/t20-,22+,23-,24-,25-/m0/s1

> <INCHI_KEY>
FWYHQJBGFPDVSC-FBMMDRQESA-N

> <FORMULA>
C25H40O2

> <MOLECULAR_WEIGHT>
372.593

> <EXACT_MASS>
372.302830528

> <JCHEM_ACCEPTOR_COUNT>
2

> <JCHEM_ATOM_COUNT>
67

> <JCHEM_AVERAGE_POLARIZABILITY>
45.27803812528189

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2E,6S)-6-[(1R,3aR,9S,12aS)-9-hydroxy-3a,6,10-trimethyl-1H,2H,3H,3aH,4H,7H,8H,9H,12H,12aH-cyclopenta[11]annulen-1-yl]-2-methylhept-2-enal

> <JCHEM_LOGP>
5.988649032333335

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
18.359964491984805

> <JCHEM_PKA_STRONGEST_BASIC>
-1.3284894734912251

> <JCHEM_POLAR_SURFACE_AREA>
37.3

> <JCHEM_REFRACTIVITY>
117.58739999999997

> <JCHEM_ROTATABLE_BOND_COUNT>
5

> <JCHEM_RULE_OF_FIVE>
0

> <JCHEM_TRADITIONAL_IUPAC>
(2E,6S)-6-[(1R,3aR,9S,12aS)-9-hydroxy-3a,6,10-trimethyl-1H,2H,3H,4H,7H,8H,9H,12H,12aH-cyclopenta[11]annulen-1-yl]-2-methylhept-2-enal

> <JCHEM_VEBER_RULE>
1

$$$$

HEADER    PROTEIN                                 20-MAY-23   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   20-MAY-23         0                                  
HETATM    1  C   UNK     0       9.779   6.599   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       9.994   5.074   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      11.422   4.498   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      11.637   2.973   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      10.356   1.878   0.000  0.00  0.00           C+0
HETATM    6  O   UNK     0       9.019   2.642   0.000  0.00  0.00           O+0
HETATM    7  C   UNK     0      10.089   0.362   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      11.159  -0.746   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       8.564   0.147   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       7.889   1.530   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       8.781   4.126   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       7.353   4.702   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       6.140   3.753   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       5.767   5.247   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       6.355   2.228   0.000  0.00  0.00           C+0
HETATM   16  H   UNK     0       7.588   3.150   0.000  0.00  0.00           H+0
HETATM   17  C   UNK     0       4.971   1.553   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       4.704   0.036   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       5.884  -0.953   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       5.617  -2.470   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       6.798  -3.460   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       6.531  -4.976   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       5.084  -5.504   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       7.711  -5.966   0.000  0.00  0.00           C+0
HETATM   25  O   UNK     0       9.158  -5.438   0.000  0.00  0.00           O+0
HETATM   26  C   UNK     0       3.257  -0.491   0.000  0.00  0.00           C+0
HETATM   27  H   UNK     0       3.498   1.102   0.000  0.00  0.00           H+0
HETATM   28  C   UNK     0       3.901   2.660   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       4.623   4.020   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3   11                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6    7                                                  
CONECT    6    5                                                            
CONECT    7    5    8    9                                                  
CONECT    8    7                                                            
CONECT    9    7   10                                                       
CONECT   10    9   15                                                       
CONECT   11    2   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14   15   29                                             
CONECT   14   13                                                            
CONECT   15   13   10   16   17                                             
CONECT   16   15                                                            
CONECT   17   15   18   27   28                                             
CONECT   18   17   19   26                                                  
CONECT   19   18   20                                                       
CONECT   20   19   21                                                       
CONECT   21   20   22                                                       
CONECT   22   21   23   24                                                  
CONECT   23   22                                                            
CONECT   24   22   25                                                       
CONECT   25   24                                                            
CONECT   26   18                                                            
CONECT   27   17                                                            
CONECT   28   17   29                                                       
CONECT   29   28   13                                                       
MASTER        0    0    0    0    0    0    0    0   29    0   60    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₅H₄₀O₂

Average Mass

372.5930 Da

Monoisotopic Mass

372.30283 Da

IUPAC Name

(2E,6S)-6-[(1R,3aR,9S,12aS)-9-hydroxy-3a,6,10-trimethyl-1H,2H,3H,3aH,4H,7H,8H,9H,12H,12aH-cyclopenta[11]annulen-1-yl]-2-methylhept-2-enal

Traditional Name

(2E,6S)-6-[(1R,3aR,9S,12aS)-9-hydroxy-3a,6,10-trimethyl-1H,2H,3H,4H,7H,8H,9H,12H,12aH-cyclopenta[11]annulen-1-yl]-2-methylhept-2-enal

CAS Registry Number

Not Available

SMILES

[H][C@@]1(CC[C@]2(C)C\C=C(C)\CC[C@H](O)\C(C)=C/C[C@@]12[H])[C@@H](C)CC\C=C(/C)C=O

InChI Identifier

InChI=1S/C25H40O2/c1-18-9-12-24(27)21(4)10-11-23-22(14-16-25(23,5)15-13-18)20(3)8-6-7-19(2)17-26/h7,10,13,17,20,22-24,27H,6,8-9,11-12,14-16H2,1-5H3/b18-13+,19-7+,21-10-/t20-,22+,23-,24-,25-/m0/s1

InChI Key

FWYHQJBGFPDVSC-FBMMDRQESA-N

Experimental Spectra

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
NOESY NMR	[¹H, ¹H] NMR Spectrum (2D, 600 MHz, D2O, experimental)	15023682370@163.com	Huazhong university of science and technology	Yong Shen	2024-09-05	View Spectrum
COSY NMR	[¹H, ¹H] NMR Spectrum (2D, 600 MHz, CDCl3, experimental)	15023682370@163.com	Huazhong university of science and technology	Yong Shen	2024-09-05	View Spectrum
HMBC NMR	[¹H, ¹³C] NMR Spectrum (2D, 600 MHz, CDCl3, experimental)	15023682370@163.com	Huazhong university of science and technology	Yong Shen	2024-09-05	View Spectrum
HSQC NMR	[¹H, ¹³C] NMR Spectrum (2D, 600 MHz, CDCl3, experimental)	15023682370@163.com	Huazhong university of science and technology	Yong Shen	2024-09-05	View Spectrum
1D_DEPT NMR	¹³C NMR Spectrum (1D, 151 MHz, CDCl3, experimental)	15023682370@163.com	Huazhong university of science and technology	Yong Shen	2024-09-05	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, CDCl3, experimental)	15023682370@163.com	Huazhong university of science and technology	Yong Shen	2024-09-05	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, CDCl3, experimental)	15023682370@163.com	Huazhong university of science and technology	Yong Shen	2024-09-05	View Spectrum

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View

Chemical Shift Submissions

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹H NMR Spectrum (1D, 600.203706235, CDCl₃, simulated)	15023682370@163.com	Huazhong university of science and technology	Yong Shen	2024-09-05	View Spectrum

Species

Species of Origin

Species Name	Source	Reference
maydis		Not Available

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as sesterterpenoids. These are terpenes composed of five consecutive isoprene units.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Sesterterpenoids

Direct Parent

Sesterterpenoids

Alternative Parents

Substituents

Prenyldolabellane sesterterpenoid
Sesterterpenoid
Enal
Alpha,beta-unsaturated aldehyde
Secondary alcohol
Organic oxygen compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Carbonyl group
Aldehyde
Alcohol
Aliphatic homopolycyclic compound

Molecular Framework

Aliphatic homopolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	5.99	ChemAxon
pKa (Strongest Acidic)	18.36	ChemAxon
pKa (Strongest Basic)	-1.3	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	2	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	37.3 Å²	ChemAxon
Rotatable Bond Count	5	ChemAxon
Refractivity	117.59 m³·mol⁻¹	ChemAxon
Polarizability	45.28 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	Yes	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Showing NP-Card for maydisen C (NP0333775)

MOL for NP0333775 (maydisen C)

3D MOL for NP0333775 (maydisen C)

3D SDF for NP0333775 (maydisen C)

3D-SDF for NP0333775 (maydisen C)

PDB for NP0333775 (maydisen C)

3D PDB for NP0333775 (maydisen C)

SMILES for NP0333775 (maydisen C)

INCHI for NP0333775 (maydisen C)

Structure for NP0333775 (maydisen C)

3D Structure for NP0333775 (maydisen C)