Np mrd loader

Record Information
Version2.0
Created at2024-06-04 17:27:53 UTC
Updated at2024-11-01 01:36:00 UTC
NP-MRD IDNP0333362
Natural Product DOIhttps://doi.org/10.57994/2730
Secondary Accession NumbersNone
Natural Product Identification
Common Namerogersonins F
DescriptionRogersonins F belongs to the class of organic compounds known as imidazopyrimidines. These are organic polycyclic compounds containing an imidazole ring fused to a pyrimidine ring. Imidazole is 5-membered ring consisting of three carbon atoms, and two nitrogen centers at the 1- and 3-positions. Pyrimidine is a 6-membered ring consisting of four carbon atoms and two nitrogen centers at the 1- and 3- ring positions. Based on a literature review very few articles have been published on rogersonins F.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC25H31N5O9
Average Mass545.5490 Da
Monoisotopic Mass545.21218 Da
IUPAC Name(2S,5E,7S,10S)-7-hydroxy-19-[(2R,4R,5R)-4-hydroxy-5-(hydroxymethyl)-3-methoxyoxolan-2-yl]-2,10-dimethyl-3,11-dioxa-15,17,19,21,24-pentaazatetracyclo[12.10.0.0^{15,23}.0^{18,22}]tetracosa-1(14),5,16,18(22),20,23-hexaene-4,12-dione
Traditional Name(2S,5E,7S,10S)-7-hydroxy-19-[(2R,4R,5R)-4-hydroxy-5-(hydroxymethyl)-3-methoxyoxolan-2-yl]-2,10-dimethyl-3,11-dioxa-15,17,19,21,24-pentaazatetracyclo[12.10.0.0^{15,23}.0^{18,22}]tetracosa-1(14),5,16,18(22),20,23-hexaene-4,12-dione
CAS Registry NumberNot Available
SMILES
COC1[C@H](O)[C@@H](CO)O[C@H]1N1C=NC2=C1N=CN1C3=C(N=C21)[C@H](C)OC(=O)\C=C\[C@@H](O)CC[C@H](C)OC(=O)C3
InChI Identifier
InChI=1S/C25H31N5O9/c1-12-4-5-14(32)6-7-17(33)38-13(2)19-15(8-18(34)37-12)29-11-27-23-20(24(29)28-19)26-10-30(23)25-22(36-3)21(35)16(9-31)39-25/h6-7,10-14,16,21-22,25,31-32,35H,4-5,8-9H2,1-3H3/b7-6+/t12-,13-,14-,16+,21+,22?,25+/m0/s1
InChI KeyIADJENGYZGSHHG-TXFDMMNOSA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
1D NMR1H NMR Spectrum (1D, 600 MHz, C2D6OS, experimental)zyqci@163.comBeijing Institute of Pharmacology & Toxicologyyang2024-06-04View Spectrum
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
rogersoniana
      Not Available
Chemical Taxonomy
DescriptionThis compound belongs to the class of organic compounds known as imidazopyrimidines. These are organic polycyclic compounds containing an imidazole ring fused to a pyrimidine ring. Imidazole is 5-membered ring consisting of three carbon atoms, and two nitrogen centers at the 1- and 3-positions. Pyrimidine is a 6-membered ring consisting of four carbon atoms and two nitrogen centers at the 1- and 3- ring positions.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassImidazopyrimidines
Sub ClassNot Available
Direct ParentImidazopyrimidines
Alternative Parents
Substituents
  • Imidazopyrimidine
  • Fatty acid ester
  • Fatty acyl
  • Pyrimidine
  • N-substituted imidazole
  • Monosaccharide
  • 1,6-dihydropyrimidine
  • Hydropyrimidine
  • Dicarboxylic acid or derivatives
  • Heteroaromatic compound
  • Alpha,beta-unsaturated carboxylic ester
  • Enoate ester
  • Tetrahydrofuran
  • Azole
  • Secondary alcohol
  • Lactone
  • Carboxylic acid ester
  • Formamidine
  • Oxacycle
  • Azacycle
  • Organic 1,3-dipolar compound
  • Propargyl-type 1,3-dipolar organic compound
  • Carboximidamide
  • Ether
  • Dialkyl ether
  • Carboxylic acid derivative
  • Amidine
  • Organic nitrogen compound
  • Organic oxygen compound
  • Organopnictogen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Organonitrogen compound
  • Alcohol
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP-0.7ChemAxon
pKa (Strongest Acidic)12.99ChemAxon
pKa (Strongest Basic)3.37ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count10ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area179.76 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity133.96 m³·mol⁻¹ChemAxon
Polarizability56.27 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References