Np mrd loader

Record Information
Version2.0
Created at2024-05-20 10:05:02 UTC
Updated at2024-11-01 00:37:35 UTC
NP-MRD IDNP0333279
Natural Product DOIhttps://doi.org/10.57994/2630
Secondary Accession NumbersNone
Natural Product Identification
Common Namejaponicone X
DescriptionJaponicone X belongs to the class of organic compounds known as diterpene lactones. These are diterpenoids containing a lactone moiety. japonicone X was first documented in 2024 (PMID: 38982404). Based on a literature review very few articles have been published on japonicone X.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC34H42O8
Average Mass578.7020 Da
Monoisotopic Mass578.28797 Da
IUPAC Name(4S)-4-[(1'S,2'S,3S,3aR,4'S,7aR,8'R,12'R,15'S)-15'-(acetyloxy)-2',11'-dimethyl-6,7'-dimethylidene-2,6'-dioxo-3a,6,7,7a-tetrahydro-2H-5'-oxaspiro[1-benzofuran-3,13'-tetracyclo[10.2.1.0^{1,10}.0^{4,8}]pentadecan]-10'-en-5-yl]pentyl acetate
Traditional Name(4S)-4-[(1'S,2'S,3S,3aR,4'S,7aR,8'R,12'R,15'S)-15'-(acetyloxy)-2',11'-dimethyl-6,7'-dimethylidene-2,6'-dioxo-7,7a-dihydro-3aH-5'-oxaspiro[1-benzofuran-3,13'-tetracyclo[10.2.1.0^{1,10}.0^{4,8}]pentadecan]-10'-en-5-yl]pentyl acetate
CAS Registry NumberNot Available
SMILES
[H][C@@]12CC(=C)C(=C[C@]1([H])[C@]1(C[C@@]34[C@@H](OC(C)=O)[C@]1([H])C(C)=C3C[C@]1([H])C(=C)C(=O)O[C@@]1([H])C[C@@H]4C)C(=O)O2)[C@@H](C)CCCOC(C)=O
InChI Identifier
InChI=1S/C34H42O8/c1-16(9-8-10-39-21(6)35)23-13-26-28(11-17(23)2)42-32(38)34(26)15-33-18(3)12-27-24(19(4)31(37)41-27)14-25(33)20(5)29(34)30(33)40-22(7)36/h13,16,18,24,26-30H,2,4,8-12,14-15H2,1,3,5-7H3/t16-,18-,24+,26-,27-,28+,29+,30-,33-,34-/m0/s1
InChI KeyDABYKRXXZNVUKG-AVFLZICSSA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
NOESY NMR[1H, 1H] NMR Spectrum (2D, 600 MHz, CDCl3, experimental)Not AvailableTianjin University of Traditional Chinese MedicineZheng Niu2024-05-20View Spectrum
COSY NMR[1H, 1H] NMR Spectrum (2D, 600 MHz, CDCl3, experimental)Not AvailableTianjin University of Traditional Chinese MedicineZheng Niu2024-05-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, CDCl3, experimental)Not AvailableTianjin University of Traditional Chinese MedicineZheng Niu2024-05-20View Spectrum
HMBC NMR[1H, 13C] NMR Spectrum (2D, 600 MHz, CDCl3, experimental)Not AvailableTianjin University of Traditional Chinese MedicineZheng Niu2024-05-20View Spectrum
HSQC NMR[1H, 13C] NMR Spectrum (2D, 600 MHz, CDCl3, experimental)Not AvailableTianjin University of Traditional Chinese MedicineZheng Niu2024-05-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, CDCl3, experimental)Not AvailableTianjin University of Traditional Chinese MedicineZheng Niu2024-05-20View Spectrum
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
japonica
      Not Available
Chemical Taxonomy
DescriptionThis compound belongs to the class of organic compounds known as diterpene lactones. These are diterpenoids containing a lactone moiety.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassTerpene lactones
Direct ParentDiterpene lactones
Alternative Parents
Substituents
  • Diterpenoid
  • Diterpene lactone
  • Xanthanolide-skeleton
  • Tetracarboxylic acid or derivatives
  • Fatty alcohol ester
  • Fatty acid ester
  • Fatty acyl
  • Gamma butyrolactone
  • Alpha,beta-unsaturated carboxylic ester
  • Enoate ester
  • Tetrahydrofuran
  • Lactone
  • Carboxylic acid ester
  • Oxacycle
  • Organoheterocyclic compound
  • Carboxylic acid derivative
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Aliphatic heteropolycyclic compound
Molecular FrameworkAliphatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP3.84ChemAxon
pKa (Strongest Basic)-6.4ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area105.2 ŲChemAxon
Rotatable Bond Count8ChemAxon
Refractivity154.04 m³·mol⁻¹ChemAxon
Polarizability63.3 ųChemAxon
Number of Rings6ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Niu Z, Chen CY, Zhou Y, Liu GK, Zhang BY, Oppong MB, Zhang DQ, Yao T, Qiu F: Characterization of Sesquiterpene Dimers from the Flowers of Inula japonica and the Structural Revisions of Related Compounds. J Nat Prod. 2024 Jul 26;87(7):1754-1762. doi: 10.1021/acs.jnatprod.4c00269. Epub 2024 Jul 9. [PubMed:38982404 ]