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This compound has been merged with an existing record. Please view the record: NP0022070
Record Information
Version2.0
Created at2024-05-02 07:24:10 UTC
Updated at2024-11-01 01:35:37 UTC
NP-MRD IDNP0332932
Natural Product DOIhttps://doi.org/10.57994/2213
Secondary Accession NumbersNone
Natural Product Identification
Common NameFactumycin
DescriptionFACTUMYCIN belongs to the class of organic compounds known as polyhalopyridines. These are organic compounds containing a pyridine ring substituted at two or more positions by a halogen atom. Factumycin was first documented in 2015 (PMID: 25621700). Based on a literature review a small amount of articles have been published on FACTUMYCIN (PMID: 38632045) (PMID: 29705162).
Structure
Thumb
SynonymsNot Available
Chemical FormulaC44H62N2O10
Average Mass778.9840 Da
Monoisotopic Mass778.44045 Da
IUPAC Name(2S)-N-[(2E,4E,6S,7R,8R,9R,10E,12E,14E,16E)-8,9-dihydroxy-18-(4-hydroxy-1-methyl-2-oxo-1,2-dihydropyridin-3-yl)-6-methoxy-5,7,17-trimethyl-18-oxooctadeca-2,4,10,12,14,16-hexaen-1-yl]-2-[(2S,4S,6S)-2,4-dihydroxy-5,5-dimethyl-6-[(1E,3E)-penta-1,3-dien-1-yl]oxan-2-yl]butanamide
Traditional Name(2S)-N-[(2E,4E,6S,7R,8R,9R,10E,12E,14E,16E)-8,9-dihydroxy-18-(4-hydroxy-1-methyl-2-oxopyridin-3-yl)-6-methoxy-5,7,17-trimethyl-18-oxooctadeca-2,4,10,12,14,16-hexaen-1-yl]-2-[(2S,4S,6S)-2,4-dihydroxy-5,5-dimethyl-6-[(1E,3E)-penta-1,3-dien-1-yl]oxan-2-yl]butanamide
CAS Registry NumberNot Available
SMILES
CC[C@H](C(=O)NC\C=C\C=C(/C)[C@@H](OC)[C@H](C)[C@@H](O)[C@H](O)\C=C\C=C\C=C\C=C(/C)C(=O)C1=C(O)C=CN(C)C1=O)[C@]1(O)C[C@H](O)C(C)(C)[C@@H](O1)\C=C\C=C\C
InChI Identifier
InChI=1S/C44H62N2O10/c1-10-12-16-24-36-43(6,7)35(49)28-44(54,56-36)32(11-2)41(52)45-26-20-19-22-30(4)40(55-9)31(5)39(51)34(48)23-18-15-13-14-17-21-29(3)38(50)37-33(47)25-27-46(8)42(37)53/h10,12-25,27,31-32,34-36,39-40,47-49,51,54H,11,26,28H2,1-9H3,(H,45,52)/b12-10+,15-13+,17-14+,20-19+,23-18+,24-16+,29-21+,30-22+/t31-,32-,34-,35+,36+,39-,40-,44+/m1/s1
InChI KeyHMBDLBWGDMNPDW-XJDJTWLWSA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 201 MHz, CDCl3, experimental)eparkins@purdue.eduPurdue UniversityElizabeth Parkinson2024-05-02View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, CDCl3, experimental)eparkins@purdue.eduPurdue UniversityElizabeth Parkinson2024-05-02View Spectrum
NOESY NMR[1H, 1H] NMR Spectrum (2D, 800 MHz, CDCl3, experimental)eparkins@purdue.eduPurdue UniversityElizabeth Parkinson2024-05-02View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, CDCl3, experimental)eparkins@purdue.eduPurdue UniversityElizabeth Parkinson2024-05-02View Spectrum
COSY NMR[1H, 1H] NMR Spectrum (2D, 800 MHz, CDCl3, experimental)eparkins@purdue.eduPurdue UniversityElizabeth Parkinson2024-05-02View Spectrum
HSQC NMR[1H, 13C] NMR Spectrum (2D, 800 MHz, CDCl3, experimental)eparkins@purdue.eduPurdue UniversityElizabeth Parkinson2024-05-02View Spectrum
HMBC NMR[1H, 13C] NMR Spectrum (2D, 800 MHz, CDCl3, experimental)eparkins@purdue.eduPurdue UniversityElizabeth Parkinson2024-05-02View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, CDCl3, experimental)eparkins@purdue.eduPurdue UniversityElizabeth Parkinson2024-05-02View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, CDCl3, experimental)eparkins@purdue.eduPurdue UniversityElizabeth Parkinson2024-05-02View Spectrum
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
Chemical Shift Submissions
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
1D NMR1H NMR Spectrum (1D, 800.20479934, CDCl3, simulated)eparkins@purdue.eduPurdue UniversityElizabeth Parkinson2024-05-02View Spectrum
Species
Species of Origin
Species NameSourceReference
toxytricini
      Not Available
Chemical Taxonomy
DescriptionThis compound belongs to the class of organic compounds known as polyhalopyridines. These are organic compounds containing a pyridine ring substituted at two or more positions by a halogen atom.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassPyridines and derivatives
Sub ClassHalopyridines
Direct ParentPolyhalopyridines
Alternative Parents
Substituents
  • Polyhalopyridine
  • Aryl ketone
  • Methylpyridine
  • Hydroxypyridine
  • Dihydropyridine
  • Fatty acyl
  • Alpha-branched alpha,beta-unsaturated-ketone
  • Oxane
  • N-acyl-amine
  • Hemiketal
  • Fatty amide
  • Heteroaromatic compound
  • Vinylogous amide
  • Vinylogous acid
  • Alpha,beta-unsaturated ketone
  • Tertiary carboxylic acid amide
  • Enone
  • Acryloyl-group
  • Secondary alcohol
  • Lactam
  • Ketone
  • Carboxamide group
  • Oxacycle
  • Azacycle
  • Ether
  • Dialkyl ether
  • Carboxylic acid derivative
  • Organic nitrogen compound
  • Organic oxygen compound
  • Organopnictogen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Organonitrogen compound
  • Alcohol
  • Aromatic heteromonocyclic compound
Molecular FrameworkAromatic heteromonocyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP5.02ChemAxon
pKa (Strongest Acidic)9.56ChemAxon
pKa (Strongest Basic)-1.8ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count10ChemAxon
Hydrogen Donor Count6ChemAxon
Polar Surface Area186.09 ŲChemAxon
Rotatable Bond Count19ChemAxon
Refractivity228.17 m³·mol⁻¹ChemAxon
Polarizability87.94 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Alwali AY, Santos D, Aguilar C, Birch A, Rodriguez-Orduna L, Roberts CB, Modi R, Licona-Cassani C, Parkinson EI: Discovery of Streptomyces species CS-62, a novel producer of the Acinetobacter baumannii selective antibiotic factumycin. J Ind Microbiol Biotechnol. 2024 Jan 9;51:kuae014. doi: 10.1093/jimb/kuae014. [PubMed:38632045 ]
  2. Charousova I, Medo J, Hleba L, Javorekova S: Streptomyces globosus DK15 and Streptomyces ederensis ST13 as new producers of factumycin and tetrangomycin antibiotics. Braz J Microbiol. 2018 Oct-Dec;49(4):816-822. doi: 10.1016/j.bjm.2017.12.007. Epub 2018 Mar 1. [PubMed:29705162 ]
  3. Gui C, Li Q, Mo X, Qin X, Ma J, Ju J: Discovery of a new family of Dieckmann cyclases essential to tetramic acid and pyridone-based natural products biosynthesis. Org Lett. 2015 Feb 6;17(3):628-31. doi: 10.1021/ol5036497. Epub 2015 Jan 26. [PubMed:25621700 ]