Np mrd loader

Record Information
Version2.0
Created at2024-05-01 17:40:18 UTC
Updated at2024-09-03 04:20:33 UTC
NP-MRD IDNP0332875
Natural Product DOIhttps://doi.org/10.57994/2154
Secondary Accession NumbersNone
Natural Product Identification
Common Name4-dehydroxyarmillaridin
Description4-Dehydroxyarmillaridin belongs to the class of organic compounds known as melleolides and analogues. Melleolides and analogues are compounds with a structure characterized by the presence of a 2-hydroxy-4-methoxy-6-methylbenzoic acid derivative linked to a 3,6,6,7b-tetramethyl-cyclobuta[e]indene moiety. 4-dehydroxyarmillaridin was first documented in 2024 (PMID: 38390787). Based on a literature review very few articles have been published on 4-dehydroxyarmillaridin.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC24H29ClO5
Average Mass432.9400 Da
Monoisotopic Mass432.17035 Da
IUPAC Name(2R,2aR,4aS,7aS,7bR)-3-formyl-6,6,7b-trimethyl-1H,2H,2aH,4aH,5H,6H,7H,7aH,7bH-cyclobuta[e]inden-2-yl 3-chloro-6-hydroxy-4-methoxy-2-methylbenzoate
Traditional Name(2R,2aR,4aS,7aS,7bR)-3-formyl-6,6,7b-trimethyl-1H,2H,2aH,4aH,5H,7H,7aH-cyclobuta[e]inden-2-yl 3-chloro-6-hydroxy-4-methoxy-2-methylbenzoate
CAS Registry NumberNot Available
SMILES
[H][C@@]12[C@@H](C[C@]1(C)[C@@]1([H])CC(C)(C)C[C@@]1([H])C=C2C=O)OC(=O)C1=C(C)C(Cl)=C(OC)C=C1O
InChI Identifier
InChI=1S/C24H29ClO5/c1-12-19(16(27)7-17(29-5)21(12)25)22(28)30-18-10-24(4)15-9-23(2,3)8-13(15)6-14(11-26)20(18)24/h6-7,11,13,15,18,20,27H,8-10H2,1-5H3/t13-,15+,18-,20-,24-/m1/s1
InChI KeyHXMLMZZBWIHOSI-VJODBNTGSA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
ROESY NMR[1H, 1H] NMR Spectrum (2D, 500 MHz, C3D6O, experimental)sebastian.pfuetze@helmholtz-hzi.deHelmholtz-centre for infection researchSebastian Pfütze2024-05-01View Spectrum
HSQC NMR[1H, 13C] NMR Spectrum (2D, 500 MHz, C3D6O, experimental)sebastian.pfuetze@helmholtz-hzi.deHelmholtz-centre for infection researchSebastian Pfütze2024-05-01View Spectrum
HSQC NMR[1H, 13C] NMR Spectrum (2D, 500 MHz, C3D6O, experimental)sebastian.pfuetze@helmholtz-hzi.deHelmholtz-centre for infection researchSebastian Pfütze2024-05-01View Spectrum
HMBC NMR[1H, 13C] NMR Spectrum (2D, 500 MHz, C3D6O, experimental)sebastian.pfuetze@helmholtz-hzi.deHelmholtz-centre for infection researchSebastian Pfütze2024-05-01View Spectrum
COSY NMR[1H, 1H] NMR Spectrum (2D, 500 MHz, C3D6O, experimental)sebastian.pfuetze@helmholtz-hzi.deHelmholtz-centre for infection researchSebastian Pfütze2024-05-01View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, C3D6O, experimental)sebastian.pfuetze@helmholtz-hzi.deHelmholtz-centre for infection researchSebastian Pfütze2024-05-01View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, C3D6O, experimental)sebastian.pfuetze@helmholtz-hzi.deHelmholtz-centre for infection researchSebastian Pfütze2024-05-01View Spectrum
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Armillaria ostoyae
      Not Available
Chemical Taxonomy
DescriptionThis compound belongs to the class of organic compounds known as melleolides and analogues. These are compounds with a structure characterized by the presence of a 2-hydroxy-4-methoxy-6-methylbenzoic acid derivative linked to a 3,6,6,7b-tetramethyl-cyclobuta[e]indene moiety.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassSesquiterpenoids
Direct ParentMelleolides and analogues
Alternative Parents
Substituents
  • Melleolide-skeleton
  • O-hydroxybenzoic acid ester
  • P-methoxybenzoic acid or derivatives
  • Halobenzoic acid or derivatives
  • 3-halobenzoic acid or derivatives
  • Salicylic acid or derivatives
  • Methoxyphenol
  • Benzoate ester
  • Benzoic acid or derivatives
  • Phenoxy compound
  • Methoxybenzene
  • Phenol ether
  • 4-chlorophenol
  • M-cresol
  • 4-halophenol
  • Benzoyl
  • Anisole
  • 1-hydroxy-2-unsubstituted benzenoid
  • Phenol
  • Halobenzene
  • Fatty acid ester
  • Chlorobenzene
  • Alkyl aryl ether
  • Fatty acyl
  • Benzenoid
  • Monocyclic benzene moiety
  • Vinylogous acid
  • Alpha,beta-unsaturated carboxylic ester
  • Enoate ester
  • Carboxylic acid ester
  • Chloroalkene
  • Haloalkene
  • Vinyl halide
  • Vinyl chloride
  • Monocarboxylic acid or derivatives
  • Ether
  • Carboxylic acid derivative
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Organochloride
  • Organohalogen compound
  • Carbonyl group
  • Aldehyde
  • Aromatic homopolycyclic compound
Molecular FrameworkAromatic homopolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP5.63ChemAxon
pKa (Strongest Acidic)9.33ChemAxon
pKa (Strongest Basic)-4.3ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area72.83 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity116.19 m³·mol⁻¹ChemAxon
Polarizability46.02 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. DOI: 10.1002/anie.202318505