NP-MRD: Showing NP-Card for preussomerin K (NP0332756)

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Record Information

Version

2.0

Created at

2024-04-19 21:58:09 UTC

Updated at

2024-09-16 20:04:46 UTC

NP-MRD ID

NP0332756

Natural Product DOI

https://doi.org/10.57994/2022

Secondary Accession Numbers

None

Natural Product Identification

Common Name

preussomerin K

Description

Based on a literature review very few articles have been published on (1S,2R,4S,12S,13R)-7,13-dihydroxy-3,11,21,22-tetraoxaheptacyclo[10.9.1.1¹,⁶.1¹²,¹⁶.0²,⁴.0¹⁰,²⁴.0²⁰,²³]Tetracosa-6,8,10(24),16(23),17,19-hexaene-5,15-dione.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306242118033D          

 40 46  0  0  0  0            999 V2000
    5.0490   -1.0264   -0.4139 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7785   -0.9896   -0.3311 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9739   -2.1715    0.0617 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.9443   -1.6824    1.0847 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.5375   -1.1102    2.1828 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9787   -0.7056    0.3966 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.2566   -1.5110   -0.5301 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1116   -1.3196   -0.6888 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8721   -2.2034   -1.4443 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2157   -2.0005   -1.5924 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7967   -0.8803   -0.9627 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1380   -0.7006   -1.1236 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0527   -0.0002   -0.2141 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6907   -0.2212   -0.0725 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8290    0.6646    0.7219 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.2490    1.6050   -0.1722 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0762    1.5473   -0.5528 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7373    2.5982   -1.1842 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0730    2.4644   -1.5361 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7324    1.2883   -1.2554 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0721    0.2483   -0.6287 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7444    0.3747   -0.2765 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1559   -0.1457    1.3377 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5538    1.4676    1.7787 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.5246    0.8374    2.5494 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9150    1.8278    1.5439 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.6075    1.1739    0.4219 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6811    1.6383    0.0168 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5704   -2.9392    0.5764 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3865   -2.5623   -0.7929 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3663   -2.5783    1.3915 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4031   -0.1187    2.2456 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3545   -3.0485   -1.9030 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8331   -2.6825   -2.1814 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7773   -0.0487   -0.8091 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2065    3.5134   -1.3971 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5973    3.2674   -2.0245 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7785    1.1868   -1.5324 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8837    2.1915    2.2877 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3321    2.7518    1.9593 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  4  6  1  0  0  0  0
  6  7  1  6  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 11 13  2  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  6  0  0  0
 16 17  1  0  0  0  0
 17 18  2  0  0  0  0
 18 19  1  0  0  0  0
 19 20  2  0  0  0  0
 20 21  1  0  0  0  0
 21 22  2  0  0  0  0
 15 23  1  0  0  0  0
 15 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 27 28  2  0  0  0  0
 21  2  1  0  0  0  0
 26 24  1  0  0  0  0
 22  6  1  0  0  0  0
 23  6  1  0  0  0  0
 14  8  2  0  0  0  0
 22 17  1  0  0  0  0
 27 13  1  0  0  0  0
  3 29  1  0  0  0  0
  3 30  1  0  0  0  0
  4 31  1  1  0  0  0
  5 32  1  0  0  0  0
  9 33  1  0  0  0  0
 10 34  1  0  0  0  0
 12 35  1  0  0  0  0
 18 36  1  0  0  0  0
 19 37  1  0  0  0  0
 20 38  1  0  0  0  0
 24 39  1  1  0  0  0
 26 40  1  1  0  0  0
M  END

     RDKit          3D

 40 46  0  0  0  0  0  0  0  0999 V2000
    5.0490   -1.0264   -0.4139 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7785   -0.9896   -0.3311 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9739   -2.1715    0.0617 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9443   -1.6824    1.0847 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.5375   -1.1102    2.1828 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9787   -0.7056    0.3966 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.2566   -1.5110   -0.5301 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1116   -1.3196   -0.6888 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8721   -2.2034   -1.4443 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2157   -2.0005   -1.5924 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7967   -0.8803   -0.9627 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1380   -0.7006   -1.1236 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0527   -0.0002   -0.2141 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6907   -0.2212   -0.0725 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8290    0.6646    0.7219 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.2490    1.6050   -0.1722 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0762    1.5473   -0.5528 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7373    2.5982   -1.1842 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0730    2.4644   -1.5361 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7324    1.2883   -1.2554 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0721    0.2483   -0.6287 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7444    0.3747   -0.2765 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1559   -0.1457    1.3377 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5538    1.4676    1.7787 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.5246    0.8374    2.5494 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9150    1.8278    1.5439 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.6075    1.1739    0.4219 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6811    1.6383    0.0168 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5704   -2.9392    0.5764 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3865   -2.5623   -0.7929 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3663   -2.5783    1.3915 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4031   -0.1187    2.2456 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3545   -3.0485   -1.9030 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8331   -2.6825   -2.1814 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7773   -0.0487   -0.8091 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2065    3.5134   -1.3971 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5973    3.2674   -2.0245 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7785    1.1868   -1.5324 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8837    2.1915    2.2877 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3321    2.7518    1.9593 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  4  6  1  0
  6  7  1  6
  7  8  1  0
  8  9  1  0
  9 10  2  0
 10 11  1  0
 11 12  1  0
 11 13  2  0
 13 14  1  0
 14 15  1  0
 15 16  1  6
 16 17  1  0
 17 18  2  0
 18 19  1  0
 19 20  2  0
 20 21  1  0
 21 22  2  0
 15 23  1  0
 15 24  1  0
 24 25  1  0
 25 26  1  0
 26 27  1  0
 27 28  2  0
 21  2  1  0
 26 24  1  0
 22  6  1  0
 23  6  1  0
 14  8  2  0
 22 17  1  0
 27 13  1  0
  3 29  1  0
  3 30  1  0
  4 31  1  1
  5 32  1  0
  9 33  1  0
 10 34  1  0
 12 35  1  0
 18 36  1  0
 19 37  1  0
 20 38  1  0
 24 39  1  1
 26 40  1  1
M  END


  Mrv1652306242118033D          

 40 46  0  0  0  0            999 V2000
    5.0490   -1.0264   -0.4139 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7785   -0.9896   -0.3311 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9739   -2.1715    0.0617 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.9443   -1.6824    1.0847 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.5375   -1.1102    2.1828 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9787   -0.7056    0.3966 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.2566   -1.5110   -0.5301 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1116   -1.3196   -0.6888 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8721   -2.2034   -1.4443 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2157   -2.0005   -1.5924 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7967   -0.8803   -0.9627 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1380   -0.7006   -1.1236 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0527   -0.0002   -0.2141 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6907   -0.2212   -0.0725 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8290    0.6646    0.7219 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.2490    1.6050   -0.1722 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0762    1.5473   -0.5528 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7373    2.5982   -1.1842 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0730    2.4644   -1.5361 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7324    1.2883   -1.2554 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0721    0.2483   -0.6287 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7444    0.3747   -0.2765 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1559   -0.1457    1.3377 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5538    1.4676    1.7787 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.5246    0.8374    2.5494 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9150    1.8278    1.5439 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.6075    1.1739    0.4219 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6811    1.6383    0.0168 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5704   -2.9392    0.5764 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3865   -2.5623   -0.7929 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3663   -2.5783    1.3915 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4031   -0.1187    2.2456 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3545   -3.0485   -1.9030 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8331   -2.6825   -2.1814 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7773   -0.0487   -0.8091 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2065    3.5134   -1.3971 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5973    3.2674   -2.0245 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7785    1.1868   -1.5324 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8837    2.1915    2.2877 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3321    2.7518    1.9593 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  4  6  1  0  0  0  0
  6  7  1  6  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 11 13  2  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  6  0  0  0
 16 17  1  0  0  0  0
 17 18  2  0  0  0  0
 18 19  1  0  0  0  0
 19 20  2  0  0  0  0
 20 21  1  0  0  0  0
 21 22  2  0  0  0  0
 15 23  1  0  0  0  0
 15 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 27 28  2  0  0  0  0
 21  2  1  0  0  0  0
 26 24  1  0  0  0  0
 22  6  1  0  0  0  0
 23  6  1  0  0  0  0
 14  8  2  0  0  0  0
 22 17  1  0  0  0  0
 27 13  1  0  0  0  0
  3 29  1  0  0  0  0
  3 30  1  0  0  0  0
  4 31  1  1  0  0  0
  5 32  1  0  0  0  0
  9 33  1  0  0  0  0
 10 34  1  0  0  0  0
 12 35  1  0  0  0  0
 18 36  1  0  0  0  0
 19 37  1  0  0  0  0
 20 38  1  0  0  0  0
 24 39  1  1  0  0  0
 26 40  1  1  0  0  0
M  END
> <DATABASE_ID>
NP0332756

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]OC1=C2C(=O)[C@@]3([H])O[C@@]3([H])[C@]34OC5=C([H])C([H])=C([H])C6=C5[C@](OC(C([H])=C1[H])=C23)(O4)[C@]([H])(O[H])C([H])([H])C6=O

> <INCHI_IDENTIFIER>
InChI=1S/C20H12O8/c21-8-4-5-11-15-13(8)16(24)17-18(25-17)20(15)27-10-3-1-2-7-9(22)6-12(23)19(26-11,28-20)14(7)10/h1-5,12,17-18,21,23H,6H2/t12-,17-,18-,19-,20+/m1/s1

> <INCHI_KEY>
FAKYINCHLIYJDP-PSJANZKSSA-N

> <FORMULA>
C20H12O8

> <MOLECULAR_WEIGHT>
380.308

> <EXACT_MASS>
380.053217346

> <JCHEM_ACCEPTOR_COUNT>
8

> <JCHEM_ATOM_COUNT>
40

> <JCHEM_AVERAGE_POLARIZABILITY>
35.1936724624963

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1S,2R,4S,12S,13R)-7,13-dihydroxy-3,11,21,22-tetraoxaheptacyclo[10.9.1.1^{1,6}.1^{12,16}.0^{2,4}.0^{10,24}.0^{20,23}]tetracosa-6,8,10(24),16(23),17,19-hexaene-5,15-dione

> <ALOGPS_LOGP>
1.73

> <JCHEM_LOGP>
2.5597617936666666

> <ALOGPS_LOGS>
-2.08

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
7

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
10.657423419166832

> <JCHEM_PKA_STRONGEST_ACIDIC>
8.674778735081743

> <JCHEM_PKA_STRONGEST_BASIC>
-3.760584909221362

> <JCHEM_POLAR_SURFACE_AREA>
114.82000000000002

> <JCHEM_REFRACTIVITY>
89.7367

> <JCHEM_ROTATABLE_BOND_COUNT>
0

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
3.18e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1S,2R,4S,12S,13R)-7,13-dihydroxy-3,11,21,22-tetraoxaheptacyclo[10.9.1.1^{1,6}.1^{12,16}.0^{2,4}.0^{10,24}.0^{20,23}]tetracosa-6,8,10(24),16(23),17,19-hexaene-5,15-dione

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 40 46  0  0  0  0  0  0  0  0999 V2000
    5.0490   -1.0264   -0.4139 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7785   -0.9896   -0.3311 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9739   -2.1715    0.0617 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9443   -1.6824    1.0847 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.5375   -1.1102    2.1828 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9787   -0.7056    0.3966 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.2566   -1.5110   -0.5301 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1116   -1.3196   -0.6888 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8721   -2.2034   -1.4443 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2157   -2.0005   -1.5924 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7967   -0.8803   -0.9627 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1380   -0.7006   -1.1236 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0527   -0.0002   -0.2141 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6907   -0.2212   -0.0725 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8290    0.6646    0.7219 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.2490    1.6050   -0.1722 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0762    1.5473   -0.5528 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7373    2.5982   -1.1842 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0730    2.4644   -1.5361 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7324    1.2883   -1.2554 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0721    0.2483   -0.6287 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7444    0.3747   -0.2765 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1559   -0.1457    1.3377 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5538    1.4676    1.7787 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.5246    0.8374    2.5494 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9150    1.8278    1.5439 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.6075    1.1739    0.4219 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6811    1.6383    0.0168 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5704   -2.9392    0.5764 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3865   -2.5623   -0.7929 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3663   -2.5783    1.3915 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4031   -0.1187    2.2456 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3545   -3.0485   -1.9030 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8331   -2.6825   -2.1814 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7773   -0.0487   -0.8091 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2065    3.5134   -1.3971 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5973    3.2674   -2.0245 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7785    1.1868   -1.5324 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8837    2.1915    2.2877 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3321    2.7518    1.9593 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  4  6  1  0
  6  7  1  6
  7  8  1  0
  8  9  1  0
  9 10  2  0
 10 11  1  0
 11 12  1  0
 11 13  2  0
 13 14  1  0
 14 15  1  0
 15 16  1  6
 16 17  1  0
 17 18  2  0
 18 19  1  0
 19 20  2  0
 20 21  1  0
 21 22  2  0
 15 23  1  0
 15 24  1  0
 24 25  1  0
 25 26  1  0
 26 27  1  0
 27 28  2  0
 21  2  1  0
 26 24  1  0
 22  6  1  0
 23  6  1  0
 14  8  2  0
 22 17  1  0
 27 13  1  0
  3 29  1  0
  3 30  1  0
  4 31  1  1
  5 32  1  0
  9 33  1  0
 10 34  1  0
 12 35  1  0
 18 36  1  0
 19 37  1  0
 20 38  1  0
 24 39  1  1
 26 40  1  1
M  END

HEADER    PROTEIN                                 24-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-JUN-21         0                                  
HETATM    1  O   UNK     0       5.049  -1.026  -0.414  0.00  0.00           O+0
HETATM    2  C   UNK     0       3.779  -0.990  -0.331  0.00  0.00           C+0
HETATM    3  C   UNK     0       2.974  -2.172   0.062  0.00  0.00           C+0
HETATM    4  C   UNK     0       1.944  -1.682   1.085  0.00  0.00           C+0
HETATM    5  O   UNK     0       2.538  -1.110   2.183  0.00  0.00           O+0
HETATM    6  C   UNK     0       0.979  -0.706   0.397  0.00  0.00           C+0
HETATM    7  O   UNK     0       0.257  -1.511  -0.530  0.00  0.00           O+0
HETATM    8  C   UNK     0      -1.112  -1.320  -0.689  0.00  0.00           C+0
HETATM    9  C   UNK     0      -1.872  -2.203  -1.444  0.00  0.00           C+0
HETATM   10  C   UNK     0      -3.216  -2.001  -1.592  0.00  0.00           C+0
HETATM   11  C   UNK     0      -3.797  -0.880  -0.963  0.00  0.00           C+0
HETATM   12  O   UNK     0      -5.138  -0.701  -1.124  0.00  0.00           O+0
HETATM   13  C   UNK     0      -3.053  -0.000  -0.214  0.00  0.00           C+0
HETATM   14  C   UNK     0      -1.691  -0.221  -0.073  0.00  0.00           C+0
HETATM   15  C   UNK     0      -0.829   0.665   0.722  0.00  0.00           C+0
HETATM   16  O   UNK     0      -0.249   1.605  -0.172  0.00  0.00           O+0
HETATM   17  C   UNK     0       1.076   1.547  -0.553  0.00  0.00           C+0
HETATM   18  C   UNK     0       1.737   2.598  -1.184  0.00  0.00           C+0
HETATM   19  C   UNK     0       3.073   2.464  -1.536  0.00  0.00           C+0
HETATM   20  C   UNK     0       3.732   1.288  -1.255  0.00  0.00           C+0
HETATM   21  C   UNK     0       3.072   0.248  -0.629  0.00  0.00           C+0
HETATM   22  C   UNK     0       1.744   0.375  -0.277  0.00  0.00           C+0
HETATM   23  O   UNK     0       0.156  -0.146   1.338  0.00  0.00           O+0
HETATM   24  C   UNK     0      -1.554   1.468   1.779  0.00  0.00           C+0
HETATM   25  O   UNK     0      -2.525   0.837   2.549  0.00  0.00           O+0
HETATM   26  C   UNK     0      -2.915   1.828   1.544  0.00  0.00           C+0
HETATM   27  C   UNK     0      -3.607   1.174   0.422  0.00  0.00           C+0
HETATM   28  O   UNK     0      -4.681   1.638   0.017  0.00  0.00           O+0
HETATM   29  H   UNK     0       3.570  -2.939   0.576  0.00  0.00           H+0
HETATM   30  H   UNK     0       2.386  -2.562  -0.793  0.00  0.00           H+0
HETATM   31  H   UNK     0       1.366  -2.578   1.391  0.00  0.00           H+0
HETATM   32  H   UNK     0       2.403  -0.119   2.246  0.00  0.00           H+0
HETATM   33  H   UNK     0      -1.355  -3.049  -1.903  0.00  0.00           H+0
HETATM   34  H   UNK     0      -3.833  -2.683  -2.181  0.00  0.00           H+0
HETATM   35  H   UNK     0      -5.777  -0.049  -0.809  0.00  0.00           H+0
HETATM   36  H   UNK     0       1.206   3.513  -1.397  0.00  0.00           H+0
HETATM   37  H   UNK     0       3.597   3.267  -2.025  0.00  0.00           H+0
HETATM   38  H   UNK     0       4.779   1.187  -1.532  0.00  0.00           H+0
HETATM   39  H   UNK     0      -0.884   2.192   2.288  0.00  0.00           H+0
HETATM   40  H   UNK     0      -3.332   2.752   1.959  0.00  0.00           H+0
CONECT    1    2                                                            
CONECT    2    1    3   21                                                  
CONECT    3    2    4   29   30                                             
CONECT    4    3    5    6   31                                             
CONECT    5    4   32                                                       
CONECT    6    4    7   22   23                                             
CONECT    7    6    8                                                       
CONECT    8    7    9   14                                                  
CONECT    9    8   10   33                                                  
CONECT   10    9   11   34                                                  
CONECT   11   10   12   13                                                  
CONECT   12   11   35                                                       
CONECT   13   11   14   27                                                  
CONECT   14   13   15    8                                                  
CONECT   15   14   16   23   24                                             
CONECT   16   15   17                                                       
CONECT   17   16   18   22                                                  
CONECT   18   17   19   36                                                  
CONECT   19   18   20   37                                                  
CONECT   20   19   21   38                                                  
CONECT   21   20   22    2                                                  
CONECT   22   21    6   17                                                  
CONECT   23   15    6                                                       
CONECT   24   15   25   26   39                                             
CONECT   25   24   26                                                       
CONECT   26   25   27   24   40                                             
CONECT   27   26   28   13                                                  
CONECT   28   27                                                            
CONECT   29    3                                                            
CONECT   30    3                                                            
CONECT   31    4                                                            
CONECT   32    5                                                            
CONECT   33    9                                                            
CONECT   34   10                                                            
CONECT   35   12                                                            
CONECT   36   18                                                            
CONECT   37   19                                                            
CONECT   38   20                                                            
CONECT   39   24                                                            
CONECT   40   26                                                            
MASTER        0    0    0    0    0    0    0    0   40    0   92    0
END

RDKit          3D

40 46  0  0  0  0  0  0  0  0999 V2000
    5.0490   -1.0264   -0.4139 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7785   -0.9896   -0.3311 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9739   -2.1715    0.0617 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9443   -1.6824    1.0847 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.5375   -1.1102    2.1828 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9787   -0.7056    0.3966 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.2566   -1.5110   -0.5301 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1116   -1.3196   -0.6888 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8721   -2.2034   -1.4443 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2157   -2.0005   -1.5924 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7967   -0.8803   -0.9627 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1380   -0.7006   -1.1236 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0527   -0.0002   -0.2141 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6907   -0.2212   -0.0725 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8290    0.6646    0.7219 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.2490    1.6050   -0.1722 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0762    1.5473   -0.5528 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7373    2.5982   -1.1842 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0730    2.4644   -1.5361 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7324    1.2883   -1.2554 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0721    0.2483   -0.6287 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7444    0.3747   -0.2765 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1559   -0.1457    1.3377 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5538    1.4676    1.7787 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.5246    0.8374    2.5494 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9150    1.8278    1.5439 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.6075    1.1739    0.4219 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6811    1.6383    0.0168 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5704   -2.9392    0.5764 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3865   -2.5623   -0.7929 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3663   -2.5783    1.3915 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4031   -0.1187    2.2456 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3545   -3.0485   -1.9030 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8331   -2.6825   -2.1814 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7773   -0.0487   -0.8091 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2065    3.5134   -1.3971 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5973    3.2674   -2.0245 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7785    1.1868   -1.5324 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8837    2.1915    2.2877 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3321    2.7518    1.9593 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  4  6  1  0
  6  7  1  6
  7  8  1  0
  8  9  1  0
  9 10  2  0
 10 11  1  0
 11 12  1  0
 11 13  2  0
 13 14  1  0
 14 15  1  0
 15 16  1  6
 16 17  1  0
 17 18  2  0
 18 19  1  0
 19 20  2  0
 20 21  1  0
 21 22  2  0
 15 23  1  0
 15 24  1  0
 24 25  1  0
 25 26  1  0
 26 27  1  0
 27 28  2  0
 21  2  1  0
 26 24  1  0
 22  6  1  0
 23  6  1  0
 14  8  2  0
 22 17  1  0
 27 13  1  0
  3 29  1  0
  3 30  1  0
  4 31  1  1
  5 32  1  0
  9 33  1  0
 10 34  1  0
 12 35  1  0
 18 36  1  0
 19 37  1  0
 20 38  1  0
 24 39  1  1
 26 40  1  1
M  END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₀H₁₂O₈

Average Mass

380.3080 Da

Monoisotopic Mass

380.05322 Da

IUPAC Name

(1S,2R,4S,12S,13R)-7,13-dihydroxy-3,11,21,22-tetraoxaheptacyclo[10.9.1.1^{1,6}.1^{12,16}.0^{2,4}.0^{10,24}.0^{20,23}]tetracosa-6,8,10(24),16(23),17,19-hexaene-5,15-dione

Traditional Name

(1S,2R,4S,12S,13R)-7,13-dihydroxy-3,11,21,22-tetraoxaheptacyclo[10.9.1.1^{1,6}.1^{12,16}.0^{2,4}.0^{10,24}.0^{20,23}]tetracosa-6,8,10(24),16(23),17,19-hexaene-5,15-dione

CAS Registry Number

Not Available

SMILES

[H]OC1=C2C(=O)[C@@]3([H])O[C@@]3([H])[C@]34OC5=C([H])C([H])=C([H])C6=C5[C@](OC(C([H])=C1[H])=C23)(O4)[C@]([H])(O[H])C([H])([H])C6=O

InChI Identifier

InChI=1S/C20H12O8/c21-8-4-5-11-15-13(8)16(24)17-18(25-17)20(15)27-10-3-1-2-7-9(22)6-12(23)19(26-11,28-20)14(7)10/h1-5,12,17-18,21,23H,6H2/t12-,17-,18-,19-,20+/m1/s1

InChI Key

FAKYINCHLIYJDP-PSJANZKSSA-N

Experimental Spectra

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
HMBC NMR	[¹H, ¹³C] NMR Spectrum (2D, 500 MHz, CDCL3, experimental)	hmasaru@hirosaki-u.ac.jp	HIrosaki Univ.	Masaru Hashimoto	2024-04-05	View Spectrum
HMQC NMR	[¹H, ¹³C] NMR Spectrum (2D, 500 MHz, CDCL3, experimental)	hmasaru@hirosaki-u.ac.jp	HIrosaki Univ.	Masaru Hashimoto	2024-04-05	View Spectrum
COSY NMR	[¹H, ¹H] NMR Spectrum (2D, 500 MHz, CDCL3, experimental)	hmasaru@hirosaki-u.ac.jp	HIrosaki Univ.	Masaru Hashimoto	2024-04-05	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, CDCL3, experimental)	hmasaru@hirosaki-u.ac.jp	HIrosaki Univ.	Masaru Hashimoto	2024-04-05	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, CDCL3, experimental)	hmasaru@hirosaki-u.ac.jp	HIrosaki Univ.	Masaru Hashimoto	2024-04-05	View Spectrum

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹H NMR Spectrum (1D, 500, CDCl₃, simulated)	hmasaru@hirosaki-u.ac.jp	HIrosaki Univ.	Masaru Hashimoto	2024-04-05	View Spectrum

Species

Species of Origin

Species Name	Source	Reference
sp. KT4147		Not Available

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.73	ALOGPS
logP	2.56	ChemAxon
logS	-2.1	ALOGPS
pKa (Strongest Acidic)	8.67	ChemAxon
pKa (Strongest Basic)	-3.8	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	8	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	114.82 Å²	ChemAxon
Rotatable Bond Count	0	ChemAxon
Refractivity	89.74 m³·mol⁻¹	ChemAxon
Polarizability	35.19 Å³	ChemAxon
Number of Rings	7	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

8582827

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

10407389

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Not Available

Showing NP-Card for preussomerin K (NP0332756)

MOL for NP0332756 (preussomerin K)

3D MOL for NP0332756 (preussomerin K)

3D SDF for NP0332756 (preussomerin K)

3D-SDF for NP0332756 (preussomerin K)

PDB for NP0332756 (preussomerin K)

3D PDB for NP0332756 (preussomerin K)

SMILES for NP0332756 (preussomerin K)

INCHI for NP0332756 (preussomerin K)

Structure for NP0332756 (preussomerin K)

3D Structure for NP0332756 (preussomerin K)