Np mrd loader

Record Information
Version2.0
Created at2024-03-20 07:48:17 UTC
Updated at2024-11-01 01:38:43 UTC
NP-MRD IDNP0332682
Natural Product DOIhttps://doi.org/10.57994/1942
Secondary Accession NumbersNone
Natural Product Identification
Common NamePeniditerpenoid B
DescriptionPeniditerpenoid B belongs to the class of organic compounds known as diterpenoids. These are terpene compounds formed by four isoprene units. Peniditerpenoid B was first documented in 2024 (PMID: 38634860). Based on a literature review very few articles have been published on Peniditerpenoid B.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC28H33NO6
Average Mass479.5730 Da
Monoisotopic Mass479.23079 Da
IUPAC Name(1S,4R,5S,14R,16S,19S,23R)-19-hydroxy-14-methoxy-4,5,24,24-tetramethyl-22-oxo-25,26-dioxa-7-azaheptacyclo[21.2.1.0^{1,20}.0^{4,19}.0^{5,16}.0^{6,14}.0^{8,13}]hexacosa-6,8(13),9,11,20-pentaen-7-ium-7-olate
Traditional Name(1S,4R,5S,14R,16S,19S,23R)-19-hydroxy-14-methoxy-4,5,24,24-tetramethyl-22-oxo-25,26-dioxa-7-azaheptacyclo[21.2.1.0^{1,20}.0^{4,19}.0^{5,16}.0^{6,14}.0^{8,13}]hexacosa-6,8(13),9,11,20-pentaen-7-ium-7-olate
CAS Registry NumberNot Available
SMILES
[H][C@]12C[C@@]3(OC)C4=C(C=CC=C4)[N+]([O-])=C3[C@]1(C)[C@@]1(C)CC[C@@]34O[C@@H](C(=O)C=C3[C@]1(O)CC2)C(C)(C)O4
InChI Identifier
InChI=1S/C28H33NO6/c1-23(2)21-19(30)14-20-27(31)11-10-16-15-26(33-5)17-8-6-7-9-18(17)29(32)22(26)25(16,4)24(27,3)12-13-28(20,34-21)35-23/h6-9,14,16,21,31H,10-13,15H2,1-5H3/t16-,21-,24+,25+,26+,27+,28-/m0/s1
InChI KeyLROFVZULMSEGSD-MEXCDTOPSA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
NOESY NMR[1H, 1H] NMR Spectrum (2D, 700 MHz, C2D6OS, experimental)Not AvailableSouth China Sea Institute of Oceanology, Chinese Academy of SciencesNot Available2024-03-20View Spectrum
1D_DEPT NMR13C NMR Spectrum (1D, 176 MHz, C2D6OS, experimental)Not AvailableSouth China Sea Institute of Oceanology, Chinese Academy of SciencesNot Available2024-03-20View Spectrum
HSQC NMR[1H, 13C] NMR Spectrum (2D, 700 MHz, C2D6OS, experimental)Not AvailableSouth China Sea Institute of Oceanology, Chinese Academy of SciencesNot Available2024-03-20View Spectrum
HMBC NMR[1H, 13C] NMR Spectrum (2D, 700 MHz, C2D6OS, experimental)Not AvailableSouth China Sea Institute of Oceanology, Chinese Academy of SciencesNot Available2024-03-20View Spectrum
COSY NMR[1H, 1H] NMR Spectrum (2D, 700 MHz, C2D6OS, experimental)Not AvailableSouth China Sea Institute of Oceanology, Chinese Academy of SciencesNot Available2024-03-20View Spectrum
1D_ NMR13C NMR Spectrum (1D, 176 MHz, C2D6OS, experimental)Not AvailableSouth China Sea Institute of Oceanology, Chinese Academy of SciencesNot Available2024-03-20View Spectrum
1D_ NMR1H NMR Spectrum (1D, 700 MHz, C2D6OS, experimental)Not AvailableSouth China Sea Institute of Oceanology, Chinese Academy of SciencesNot Available2024-03-20View Spectrum
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of OriginNot Available
Chemical Taxonomy
DescriptionThis compound belongs to the class of organic compounds known as diterpenoids. These are terpene compounds formed by four isoprene units.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassDiterpenoids
Direct ParentDiterpenoids
Alternative Parents
Substituents
  • Diterpenoid
  • Steroid
  • 4-oxasteroid
  • Naphthopyran
  • 3-alkylindole
  • Naphthalene
  • Indole or derivatives
  • Ketal
  • Dihydropyranone
  • Benzenoid
  • Pyran
  • Monosaccharide
  • Alpha,beta-unsaturated ketone
  • Tertiary alcohol
  • Secondary ketimine
  • Enone
  • Cyclic alcohol
  • Acryloyl-group
  • Meta-dioxolane
  • Nitrone
  • Ketone
  • Oxacycle
  • Azacycle
  • Organoheterocyclic compound
  • Organic 1,3-dipolar compound
  • Propargyl-type 1,3-dipolar organic compound
  • Allyl-type 1,3-dipolar organic compound
  • Ether
  • Dialkyl ether
  • Organic nitrogen compound
  • Organic oxygen compound
  • Organopnictogen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organic zwitterion
  • Organooxygen compound
  • Organonitrogen compound
  • Organic hyponitrite
  • Alcohol
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP1ChemAxon
pKa (Strongest Acidic)4.1ChemAxon
pKa (Strongest Basic)-3.4ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area91.06 ŲChemAxon
Rotatable Bond Count1ChemAxon
Refractivity138.43 m³·mol⁻¹ChemAxon
Polarizability51.97 ųChemAxon
Number of Rings7ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Cai J, Li M, Chen C, Yang B, Gao C, Liu Y, Luo X, Tan Y, Zhou X: Peniditerpenoids A and B: Oxidized Indole Diterpenoids with Osteoclast Differentiation Inhibitory Activity from a Mangrove-Sediment-Derived Penicillium sp. J Nat Prod. 2024 May 24;87(5):1401-1406. doi: 10.1021/acs.jnatprod.4c00116. Epub 2024 Apr 18. [PubMed:38634860 ]