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Record Information
Version2.0
Created at2024-02-03 04:04:53 UTC
Updated at2024-09-03 04:19:21 UTC
NP-MRD IDNP0332471
Natural Product DOIhttps://doi.org/10.57994/1722
Secondary Accession NumbersNone
Natural Product Identification
Common NameGausemycin C
Description Based on a literature review very few articles have been published on Gausemycin C.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC88H123ClN18O29
Average Mass1932.5000 Da
Monoisotopic Mass1930.83919 Da
IUPAC Name4-{[(1S)-1-{[(7R,10S,16S,22S,25S,30aS)-22-[2-(2-amino-4-chlorophenyl)-2-oxoethyl]-10-(carboxymethyl)-16-(hydroxymethyl)-3,25-dimethyl-7-(2-methylpropyl)-1,5,8,11,14,17,20,23,26-nonaoxo-triacontahydropyrrolo[2,1-c]1,4,7,10,13,16,19,22,25-nonaazacyclooctacosan-4-yl]carbamoyl}-2-(4-{[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxy}phenyl)ethyl]carbamoyl}-3-hydroxy-4-{4-hydroxy-2-[(2S)-5-[3-(methylamino)propanamido]-2-{3-[(2Z,4E)-6-methylhepta-2,4-dienamido]propanamido}pentanamido]-4-phenylbutanamido}butanoic acid
Traditional Name4-{[(1S)-1-{[(7R,10S,16S,22S,25S,30aS)-22-[2-(2-amino-4-chlorophenyl)-2-oxoethyl]-10-(carboxymethyl)-16-(hydroxymethyl)-3,25-dimethyl-7-(2-methylpropyl)-1,5,8,11,14,17,20,23,26-nonaoxo-icosahydro-2H-pyrrolo[2,1-c]1,4,7,10,13,16,19,22,25-nonaazacyclooctacosan-4-yl]carbamoyl}-2-(4-{[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxy}phenyl)ethyl]carbamoyl}-3-hydroxy-4-{4-hydroxy-2-[(2S)-5-[3-(methylamino)propanamido]-2-{3-[(2Z,4E)-6-methylhepta-2,4-dienamido]propanamido}pentanamido]-4-phenylbutanamido}butanoic acid
CAS Registry NumberNot Available
SMILES
CNCCC(=O)NCCC[C@H](NC(=O)CCNC(=O)\C=C/C=C/C(C)C)C(=O)NC(CC(O)C1=CC=CC=C1)C(=O)NC(C(O)CC(O)=O)C(=O)N[C@@H](CC1=CC=C(O[C@@H]2OC[C@H](O)[C@H](O)[C@H]2O)C=C1)C(=O)NC1C(C)NC(=O)[C@@H]2CCCN2C(=O)[C@H](C)NC(=O)[C@H](CC(=O)C2=CC=C(Cl)C=C2N)NC(=O)CNC(=O)[C@H](CO)NC(=O)CNC(=O)[C@H](CC(O)=O)NC(=O)[C@@H](CC(C)C)NC1=O
InChI Identifier
InChI=1S/C88H123ClN18O29/c1-44(2)15-11-12-20-66(113)93-31-28-68(115)98-54(18-13-29-92-67(114)27-30-91-7)79(126)101-58(36-62(109)49-16-9-8-10-17-49)83(130)106-74(64(111)39-72(120)121)86(133)104-56(34-48-21-24-51(25-22-48)136-88-76(123)75(122)65(112)43-135-88)82(129)105-73-46(5)96-84(131)61-19-14-32-107(61)87(134)47(6)97-80(127)57(37-63(110)52-26-23-50(89)35-53(52)90)99-69(116)40-95-78(125)60(42-108)100-70(117)41-94-77(124)59(38-71(118)119)102-81(128)55(33-45(3)4)103-85(73)132/h8-12,15-17,20-26,35,44-47,54-62,64-65,73-76,88,91,108-109,111-112,122-123H,13-14,18-19,27-34,36-43,90H2,1-7H3,(H,92,114)(H,93,113)(H,94,124)(H,95,125)(H,96,131)(H,97,127)(H,98,115)(H,99,116)(H,100,117)(H,101,126)(H,102,128)(H,103,132)(H,104,133)(H,105,129)(H,106,130)(H,118,119)(H,120,121)/b15-11+,20-12-/t46?,47-,54-,55?,56-,57?,58?,59-,60?,61-,62?,64?,65-,73?,74?,75-,76+,88-/m0/s1
InChI KeyXRVXSRJWUXTTSC-SGEBFQDDSA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 201 MHz, C2D6OS, experimental)apar@nmr.ruShemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of SciencesAlexander Paramonov2024-02-03View Spectrum
HMBC NMR[1H, 13C] NMR Spectrum (2D, 800 MHz, C2D6OS, experimental)apar@nmr.ruShemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of SciencesAlexander Paramonov2024-02-03View Spectrum
MLEV NMR[1H, 1H] NMR Spectrum (2D, 800 MHz, C2D6OS, experimental)apar@nmr.ruShemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of SciencesAlexander Paramonov2024-02-03View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, C2D6OS, experimental)apar@nmr.ruShemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of SciencesAlexander Paramonov2024-02-03View Spectrum
HSQC NMR[1H, 13C] NMR Spectrum (2D, 800 MHz, C2D6OS, experimental)apar@nmr.ruShemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of SciencesAlexander Paramonov2024-02-03View Spectrum
HSQC NMR[1H, 15N] NMR Spectrum (2D, 600 MHz, C2D6OS, experimental)apar@nmr.ruShemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of SciencesAlexander Paramonov2024-02-03View Spectrum
COSY NMR[1H, 1H] NMR Spectrum (2D, 800 MHz, C2D6OS, experimental)apar@nmr.ruShemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of SciencesAlexander Paramonov2024-02-03View Spectrum
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of OriginNot Available
Chemical Taxonomy
DescriptionThis compound belongs to the class of organic compounds known as hybrid peptides. These are compounds containing at least two different types of amino acids (alpha, beta, gamma, delta) linked to each other through a peptide bond.
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassPeptidomimetics
Sub ClassHybrid peptides
Direct ParentHybrid peptides
Alternative Parents
Substituents
  • Hybrid peptide
  • Phenylalanine or derivatives
  • Glutamic acid or derivatives
  • Leucine or derivatives
  • Aspartic acid or derivatives
  • Alkyl-phenylketone
  • N-acyl-alpha amino acid or derivatives
  • Serine or derivatives
  • Alpha-amino acid amide
  • Alanine or derivatives
  • Beta amino acid or derivatives
  • Amphetamine or derivatives
  • Alpha-amino acid or derivatives
  • N-substituted-alpha-amino acid
  • Phenylketone
  • Phenoxy compound
  • Aryl alkyl ketone
  • Aryl ketone
  • Pyrrolidine-2-carboxamide
  • Pyrrolidine carboxylic acid or derivatives
  • Phenol ether
  • N-acylpyrrolidine
  • Benzoyl
  • Halobenzene
  • Chlorobenzene
  • Beta-hydroxy acid
  • Fatty acyl
  • Alpha-branched alpha,beta-unsaturated-ketone
  • Benzenoid
  • Oxane
  • N-acyl-amine
  • Monosaccharide
  • Hydroxy acid
  • Fatty amide
  • Dicarboxylic acid or derivatives
  • Monocyclic benzene moiety
  • Vinylogous amide
  • Alpha,beta-unsaturated ketone
  • Tertiary carboxylic acid amide
  • Pyrrolidine
  • Enone
  • Acryloyl-group
  • Amino acid
  • Secondary alcohol
  • Lactam
  • Ketone
  • Carboxamide group
  • Amino acid or derivatives
  • Oxacycle
  • Azacycle
  • Chloroalkene
  • Haloalkene
  • Organoheterocyclic compound
  • Vinyl halide
  • Vinyl chloride
  • Secondary amine
  • Secondary aliphatic amine
  • Carboxylic acid
  • Carboxylic acid derivative
  • Organic nitrogen compound
  • Organic oxygen compound
  • Organopnictogen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Aromatic alcohol
  • Primary amine
  • Organooxygen compound
  • Organonitrogen compound
  • Organochloride
  • Organohalogen compound
  • Primary aliphatic amine
  • Amine
  • Alcohol
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP-11ChemAxon
pKa (Strongest Acidic)3.29ChemAxon
pKa (Strongest Basic)9.62ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count31ChemAxon
Hydrogen Donor Count25ChemAxon
Polar Surface Area726.37 ŲChemAxon
Rotatable Bond Count40ChemAxon
Refractivity478.99 m³·mol⁻¹ChemAxon
Polarizability197.65 ųChemAxon
Number of Rings6ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References