NP-MRD: Showing NP-Card for pyrenochone D (NP0332397)

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Record Information

Version

2.0

Created at

2024-01-22 04:01:44 UTC

Updated at

2024-09-03 04:19:03 UTC

NP-MRD ID

NP0332397

Natural Product DOI

https://doi.org/10.57994/1616

Secondary Accession Numbers

None

Natural Product Identification

Common Name

pyrenochone D

Description

Pyrenochone D belongs to the class of organic compounds known as diterpenoids. These are terpene compounds formed by four isoprene units. Based on a literature review very few articles have been published on pyrenochone D.

Structure

MOL SDF PDB SMILES InChI


  Mrv2104 01222404012D          

 39 44  0  0  0  0            999 V2000
   -2.0525   -0.1992    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3053    0.1503    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6289   -0.3220    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1184    0.0276    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1893    0.8495    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0269    1.0170    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9914    1.8838    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.3259    2.6785    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9928    3.2124    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8733    3.1568    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5208    2.5863    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0700    1.9205    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2898    1.0961    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9786    0.3321    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6091   -0.2000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5492   -1.0228    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.3100    0.2352    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.1127    1.0362    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6448    1.6667    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.1803    0.0331    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3751   -0.7685    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.3389   -0.0669    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5438    0.3156    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9158   -0.2536    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0998   -1.0690    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4531   -1.5812    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8473   -1.4330    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4782   -0.8940    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2905   -1.0383    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0318   -1.5057    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7788   -2.2909    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9723   -2.4645    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3324   -2.9026    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0795   -3.6879    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8210    2.1357    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0066    2.2121    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4871    1.3219    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4162    2.1438    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2344    0.9723    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  2  0  0  0  0
  9 10  1  0  0  0  0
 10 11  2  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 15 17  1  0  0  0  0
 17 18  1  0  0  0  0
 13 18  1  0  0  0  0
 18 19  2  0  0  0  0
 14 20  1  0  0  0  0
 20 21  2  0  0  0  0
 20 22  1  0  0  0  0
 22 23  1  0  0  0  0
  6 23  1  0  0  0  0
 23 24  1  0  0  0  0
  4 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 25 27  2  0  0  0  0
 27 28  1  0  0  0  0
 22 28  1  0  0  0  0
 28 29  1  0  0  0  0
 28 30  1  0  0  0  0
 30 31  2  0  0  0  0
 31 32  1  0  0  0  0
 31 33  1  0  0  0  0
 33 34  2  0  0  0  0
 11 35  1  0  0  0  0
 35 36  2  0  0  0  0
  8 36  1  0  0  0  0
  5 37  1  0  0  0  0
 37 38  1  0  0  0  0
 37 39  1  0  0  0  0
  2 39  1  0  0  0  0
M  END


  Mrv2104 01222404012D          

 39 44  0  0  0  0            999 V2000
   -2.0525   -0.1992    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3053    0.1503    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6289   -0.3220    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1184    0.0276    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1893    0.8495    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0269    1.0170    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9914    1.8838    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.3259    2.6785    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9928    3.2124    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8733    3.1568    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5208    2.5863    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0700    1.9205    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2898    1.0961    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9786    0.3321    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6091   -0.2000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5492   -1.0228    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.3100    0.2352    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.1127    1.0362    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6448    1.6667    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.1803    0.0331    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3751   -0.7685    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.3389   -0.0669    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5438    0.3156    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9158   -0.2536    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0998   -1.0690    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4531   -1.5812    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8473   -1.4330    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4782   -0.8940    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2905   -1.0383    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0318   -1.5057    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7788   -2.2909    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9723   -2.4645    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3324   -2.9026    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0795   -3.6879    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8210    2.1357    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0066    2.2121    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4871    1.3219    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4162    2.1438    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2344    0.9723    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  2  0  0  0  0
  9 10  1  0  0  0  0
 10 11  2  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 15 17  1  0  0  0  0
 17 18  1  0  0  0  0
 13 18  1  0  0  0  0
 18 19  2  0  0  0  0
 14 20  1  0  0  0  0
 20 21  2  0  0  0  0
 20 22  1  0  0  0  0
 22 23  1  0  0  0  0
  6 23  1  0  0  0  0
 23 24  1  0  0  0  0
  4 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 25 27  2  0  0  0  0
 27 28  1  0  0  0  0
 22 28  1  0  0  0  0
 28 29  1  0  0  0  0
 28 30  1  0  0  0  0
 30 31  2  0  0  0  0
 31 32  1  0  0  0  0
 31 33  1  0  0  0  0
 33 34  2  0  0  0  0
 11 35  1  0  0  0  0
 35 36  2  0  0  0  0
  8 36  1  0  0  0  0
  5 37  1  0  0  0  0
 37 38  1  0  0  0  0
 37 39  1  0  0  0  0
  2 39  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0332397

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC1CC2C(C3OC4=CC=C(CC5C(C(=O)NC5=O)C(=O)C5C3C2C(C)=CC5(C)\C=C(/C)C=C)C=C4)C(C)C1

> <INCHI_IDENTIFIER>
InChI=1/C34H41NO4/c1-7-17(2)15-34(6)16-20(5)25-23-13-18(3)12-19(4)26(23)31-28(25)29(34)30(36)27-24(32(37)35-33(27)38)14-21-8-10-22(39-31)11-9-21/h7-11,15-16,18-19,23-29,31H,1,12-14H2,2-6H3,(H,35,37,38)/b17-15+

> <INCHI_KEY>
FFTRNMSKWOKPKI-BMRADRMJNA-N

> <FORMULA>
C34H41NO4

> <MOLECULAR_WEIGHT>
527.705

> <EXACT_MASS>
527.303558804

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
80

> <JCHEM_AVERAGE_POLARIZABILITY>
59.18330381225701

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
5,7,11,13-tetramethyl-13-[(1E)-2-methylbuta-1,3-dien-1-yl]-2-oxa-18-azahexacyclo[20.2.2.1^{3,10}.0^{4,9}.0^{16,20}.0^{14,27}]heptacosa-1(24),11,22,25-tetraene-15,17,19-trione

> <JCHEM_LOGP>
5.943820931333331

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
6

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
9.924463773865968

> <JCHEM_PKA_STRONGEST_ACIDIC>
9.53869113162718

> <JCHEM_PKA_STRONGEST_BASIC>
-4.857612369809858

> <JCHEM_POLAR_SURFACE_AREA>
72.47

> <JCHEM_REFRACTIVITY>
153.4725

> <JCHEM_ROTATABLE_BOND_COUNT>
2

> <JCHEM_RULE_OF_FIVE>
0

> <JCHEM_TRADITIONAL_IUPAC>
5,7,11,13-tetramethyl-13-[(1E)-2-methylbuta-1,3-dien-1-yl]-2-oxa-18-azahexacyclo[20.2.2.1^{3,10}.0^{4,9}.0^{16,20}.0^{14,27}]heptacosa-1(24),11,22,25-tetraene-15,17,19-trione

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 22-JAN-24   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   22-JAN-24         0                                  
HETATM    1  C   UNK     0      -3.831  -0.372   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -2.437   0.281   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -1.174  -0.601   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       0.221   0.051   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       0.353   1.586   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       1.917   1.898   0.000  0.00  0.00           C+0
HETATM    7  O   UNK     0       1.851   3.516   0.000  0.00  0.00           O+0
HETATM    8  C   UNK     0       2.475   5.000   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       3.720   5.996   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       5.364   5.893   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       6.572   4.828   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       7.597   3.585   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       8.008   2.046   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       7.427   0.620   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       8.604  -0.373   0.000  0.00  0.00           C+0
HETATM   16  O   UNK     0       8.492  -1.909   0.000  0.00  0.00           O+0
HETATM   17  N   UNK     0       9.912   0.439   0.000  0.00  0.00           N+0
HETATM   18  C   UNK     0       9.544   1.934   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0      10.537   3.111   0.000  0.00  0.00           O+0
HETATM   20  C   UNK     0       5.937   0.062   0.000  0.00  0.00           C+0
HETATM   21  O   UNK     0       6.300  -1.435   0.000  0.00  0.00           O+0
HETATM   22  C   UNK     0       4.366  -0.125   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       2.882   0.589   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       1.709  -0.473   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       2.053  -1.995   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       0.846  -2.952   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       3.448  -2.675   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0       4.626  -1.669   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       6.142  -1.938   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0       5.659  -2.811   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0       5.187  -4.276   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0       3.682  -4.600   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0       6.221  -5.418   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0       5.748  -6.884   0.000  0.00  0.00           C+0
HETATM   35  C   UNK     0       5.266   3.987   0.000  0.00  0.00           C+0
HETATM   36  C   UNK     0       3.746   4.129   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0      -0.909   2.467   0.000  0.00  0.00           C+0
HETATM   38  C   UNK     0      -0.777   4.002   0.000  0.00  0.00           C+0
HETATM   39  C   UNK     0      -2.304   1.815   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3   39                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5   24                                                  
CONECT    5    4    6   37                                                  
CONECT    6    5    7   23                                                  
CONECT    7    6    8                                                       
CONECT    8    7    9   36                                                  
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12   35                                                  
CONECT   12   11   13                                                       
CONECT   13   12   14   18                                                  
CONECT   14   13   15   20                                                  
CONECT   15   14   16   17                                                  
CONECT   16   15                                                            
CONECT   17   15   18                                                       
CONECT   18   17   13   19                                                  
CONECT   19   18                                                            
CONECT   20   14   21   22                                                  
CONECT   21   20                                                            
CONECT   22   20   23   28                                                  
CONECT   23   22    6   24                                                  
CONECT   24   23    4   25                                                  
CONECT   25   24   26   27                                                  
CONECT   26   25                                                            
CONECT   27   25   28                                                       
CONECT   28   27   22   29   30                                             
CONECT   29   28                                                            
CONECT   30   28   31                                                       
CONECT   31   30   32   33                                                  
CONECT   32   31                                                            
CONECT   33   31   34                                                       
CONECT   34   33                                                            
CONECT   35   11   36                                                       
CONECT   36   35    8                                                       
CONECT   37    5   38   39                                                  
CONECT   38   37                                                            
CONECT   39   37    2                                                       
MASTER        0    0    0    0    0    0    0    0   39    0   88    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₃₄H₄₁NO₄

Average Mass

527.7050 Da

Monoisotopic Mass

527.30356 Da

IUPAC Name

5,7,11,13-tetramethyl-13-[(1E)-2-methylbuta-1,3-dien-1-yl]-2-oxa-18-azahexacyclo[20.2.2.1^{3,10}.0^{4,9}.0^{16,20}.0^{14,27}]heptacosa-1(24),11,22,25-tetraene-15,17,19-trione

Traditional Name

5,7,11,13-tetramethyl-13-[(1E)-2-methylbuta-1,3-dien-1-yl]-2-oxa-18-azahexacyclo[20.2.2.1^{3,10}.0^{4,9}.0^{16,20}.0^{14,27}]heptacosa-1(24),11,22,25-tetraene-15,17,19-trione

CAS Registry Number

Not Available

SMILES

CC1CC2C(C3OC4=CC=C(CC5C(C(=O)NC5=O)C(=O)C5C3C2C(C)=CC5(C)\C=C(/C)C=C)C=C4)C(C)C1

InChI Identifier

InChI=1/C34H41NO4/c1-7-17(2)15-34(6)16-20(5)25-23-13-18(3)12-19(4)26(23)31-28(25)29(34)30(36)27-24(32(37)35-33(27)38)14-21-8-10-22(39-31)11-9-21/h7-11,15-16,18-19,23-29,31H,1,12-14H2,2-6H3,(H,35,37,38)/b17-15+

InChI Key

FFTRNMSKWOKPKI-BMRADRMJNA-N

Experimental Spectra

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
HMBC NMR	[¹H, ¹³C] NMR Spectrum (2D, 700 MHz, C2D6OS, experimental)	Not Available	CAS Key Laboratory of Tropical Marine Bio-resources and Ecology, Guangdong Key Laboratory of Marine Materia Medica, South China Sea Institute of Oceanology	Shuhua Qi	2024-05-02	View Spectrum
NOESY NMR	[¹H, ¹H] NMR Spectrum (2D, 700 MHz, C2D6OS, experimental)	Not Available	CAS Key Laboratory of Tropical Marine Bio-resources and Ecology, Guangdong Key Laboratory of Marine Materia Medica, South China Sea Institute of Oceanology	Shuhua Qi	2024-05-02	View Spectrum
COSY NMR	[¹H, ¹H] NMR Spectrum (2D, 700 MHz, C2D6OS, experimental)	Not Available	CAS Key Laboratory of Tropical Marine Bio-resources and Ecology, Guangdong Key Laboratory of Marine Materia Medica, South China Sea Institute of Oceanology	Shuhua Qi	2024-05-02	View Spectrum
HSQC NMR	[¹H, ¹³C] NMR Spectrum (2D, 700 MHz, C2D6OS, experimental)	Not Available	CAS Key Laboratory of Tropical Marine Bio-resources and Ecology, Guangdong Key Laboratory of Marine Materia Medica, South China Sea Institute of Oceanology	Shuhua Qi	2024-05-02	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, C2D6OS, experimental)	Not Available	CAS Key Laboratory of Tropical Marine Bio-resources and Ecology, Guangdong Key Laboratory of Marine Materia Medica, South China Sea Institute of Oceanology	Shuhua Qi	2024-05-02	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, C2D6OS, experimental)	Not Available	CAS Key Laboratory of Tropical Marine Bio-resources and Ecology, Guangdong Key Laboratory of Marine Materia Medica, South China Sea Institute of Oceanology	Shuhua Qi	2024-05-02	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, C2D6OS, experimental)	Not Available	CAS Key Laboratory of Tropical Marine Bio-resources and Ecology, Guangdong Key Laboratory of Marine Materia Medica, South China Sea Institute of Oceanology	Shuhua Qi	2024-05-02	View Spectrum

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
sp.		Not Available

Chemical Taxonomy

Description

This compound belongs to the class of organic compounds known as diterpenoids. These are terpene compounds formed by four isoprene units.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Diterpenoids

Direct Parent

Diterpenoids

Alternative Parents

Substituents

Diterpenoid
Alkyl aryl ether
Benzenoid
1,3-dicarbonyl compound
2-pyrrolidone
Pyrrolidone
N-acyl-amine
Pyrrolidine
Carboxylic acid imide, n-unsubstituted
Dicarboximide
Carboxylic acid imide
Ketone
Oxacycle
Azacycle
Organoheterocyclic compound
Ether
Carboxylic acid derivative
Organic nitrogen compound
Organic oxygen compound
Organopnictogen compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Organonitrogen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	5.94	ChemAxon
pKa (Strongest Acidic)	9.54	ChemAxon
pKa (Strongest Basic)	-4.9	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	72.47 Å²	ChemAxon
Rotatable Bond Count	2	ChemAxon
Refractivity	153.47 m³·mol⁻¹	ChemAxon
Polarizability	59.18 Å³	ChemAxon
Number of Rings	6	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Showing NP-Card for pyrenochone D (NP0332397)

MOL for NP0332397 (pyrenochone D)

3D MOL for NP0332397 (pyrenochone D)

3D SDF for NP0332397 (pyrenochone D)

3D-SDF for NP0332397 (pyrenochone D)

PDB for NP0332397 (pyrenochone D)

3D PDB for NP0332397 (pyrenochone D)

SMILES for NP0332397 (pyrenochone D)

INCHI for NP0332397 (pyrenochone D)

Structure for NP0332397 (pyrenochone D)

3D Structure for NP0332397 (pyrenochone D)