Np mrd loader

Record Information
Version2.0
Created at2023-10-25 20:00:20 UTC
Updated at2024-09-03 04:17:45 UTC
NP-MRD IDNP0332027
Natural Product DOIhttps://doi.org/10.57994/1155
Secondary Accession NumbersNone
Natural Product Identification
Common NameLigureside E
DescriptionLigureside E belongs to the class of organic compounds known as fatty acyl glycosides of mono- and disaccharides. Fatty acyl glycosides of mono- and disaccharides are compounds composed of a mono- or disaccharide moiety linked to one hydroxyl group of a fatty alcohol or of a phosphorylated alcohol (phosphoprenols), a hydroxy fatty acid or to one carboxyl group of a fatty acid (ester linkage) or to an amino alcohol. Ligureside E was first documented in 2023 (PMID: 37852389). Based on a literature review very few articles have been published on Ligureside E.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC26H34O12
Average Mass538.5460 Da
Monoisotopic Mass538.20503 Da
IUPAC Namemethyl (2S,3E,4S)-3-ethylidene-4-(2-methoxy-2-oxoethyl)-2-{[(2R,3S,6R)-3,4,5-trihydroxy-6-[2-(4-hydroxyphenyl)ethoxy]oxan-2-yl]methoxy}-3,4-dihydro-2H-pyran-5-carboxylate
Traditional Namemethyl (4S,5E,6S)-5-ethylidene-4-(2-methoxy-2-oxoethyl)-6-{[(2R,3S,6R)-3,4,5-trihydroxy-6-[2-(4-hydroxyphenyl)ethoxy]oxan-2-yl]methoxy}-4,6-dihydropyran-3-carboxylate
CAS Registry NumberNot Available
SMILES
COC(=O)C[C@H]1\C(=C/C)[C@@H](OC[C@H]2O[C@@H](OCCC3=CC=C(O)C=C3)C(O)C(O)[C@@H]2O)OC=C1C(=O)OC
InChI Identifier
InChI=1S/C26H34O12/c1-4-16-17(11-20(28)33-2)18(24(32)34-3)12-36-25(16)37-13-19-21(29)22(30)23(31)26(38-19)35-10-9-14-5-7-15(27)8-6-14/h4-8,12,17,19,21-23,25-27,29-31H,9-11,13H2,1-3H3/b16-4+/t17-,19+,21+,22?,23?,25+,26+/m0/s1
InChI KeyYFEZMAFVLOOYIM-AQLCXSFQSA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
Predicted Spectra
Not Available
Chemical Shift Submissions
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
1D NMR1H NMR Spectrum (1D, 400, CD3OD, simulated)wangying_cpu@163.comJinan UniversityYing Wang2024-05-09View Spectrum
Species
Species of Origin
Species NameSourceReference
lucidum
      Not Available
Chemical Taxonomy
DescriptionThis compound belongs to the class of organic compounds known as fatty acyl glycosides of mono- and disaccharides. These are compounds composed of a mono- or disaccharide moiety linked to one hydroxyl group of a fatty alcohol or of a phosphorylated alcohol (phosphoprenols), a hydroxy fatty acid or to one carboxyl group of a fatty acid (ester linkage) or to an amino alcohol.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassFatty Acyls
Sub ClassFatty acyl glycosides
Direct ParentFatty acyl glycosides of mono- and disaccharides
Alternative Parents
Substituents
  • Fatty acyl glycoside of mono- or disaccharide
  • Alkyl glycoside
  • Secoiridoid-skeleton
  • Tyrosol derivative
  • Monoterpenoid
  • Monocyclic monoterpenoid
  • Aromatic monoterpenoid
  • 1-hydroxy-2-unsubstituted benzenoid
  • Fatty acid methyl ester
  • Phenol
  • Fatty acid ester
  • Benzenoid
  • Oxane
  • Monosaccharide
  • Dicarboxylic acid or derivatives
  • Monocyclic benzene moiety
  • Alpha,beta-unsaturated carboxylic ester
  • Enoate ester
  • Methyl ester
  • Secondary alcohol
  • Carboxylic acid ester
  • Oxacycle
  • Organoheterocyclic compound
  • Carboxylic acid derivative
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Alcohol
  • Aromatic heteromonocyclic compound
Molecular FrameworkAromatic heteromonocyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP1.06ChemAxon
pKa (Strongest Acidic)10.2ChemAxon
pKa (Strongest Basic)-3.6ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count10ChemAxon
Hydrogen Donor Count4ChemAxon
Polar Surface Area170.44 ŲChemAxon
Rotatable Bond Count12ChemAxon
Refractivity130.99 m³·mol⁻¹ChemAxon
Polarizability53.91 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Peng YS, Liu JX, Jiao J, Qiu ML, Tang W, Song JG, Ye WC, Wang Y, Huang XJ: Secoiridoid glycosides from the fruits of Ligustrum lucidum and their in vitro anti-inflammatory activity. Fitoterapia. 2023 Dec;171:105705. doi: 10.1016/j.fitote.2023.105705. Epub 2023 Oct 16. [PubMed:37852389 ]