Np mrd loader

Record Information
Version2.0
Created at2023-09-27 04:11:46 UTC
Updated at2024-09-03 04:17:19 UTC
NP-MRD IDNP0331894
Natural Product DOIhttps://doi.org/10.57994/1000
Secondary Accession NumbersNone
Natural Product Identification
Common NameAcidonemycin C
DescriptionAcidonemycin C belongs to the class of organic compounds known as o-glucuronides. These are glucuronides in which the aglycone is linked to the carbohydrate unit through an O-glycosidic bond. Based on a literature review very few articles have been published on Acidonemycin C.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC25H24O11
Average Mass500.4560 Da
Monoisotopic Mass500.13186 Da
IUPAC Name(3S,4S,5R)-3,4,5-trihydroxy-6-{[(1R)-1-[(6S)-2-hydroxy-6-methyl-8-oxo-5,6,7,8-tetrahydronaphthalen-1-yl]-3-oxo-1,3-dihydro-2-benzofuran-4-yl]oxy}oxane-2-carboxylic acid
Traditional Name(3S,4S,5R)-3,4,5-trihydroxy-6-{[(1R)-1-[(6S)-2-hydroxy-6-methyl-8-oxo-6,7-dihydro-5H-naphthalen-1-yl]-3-oxo-1H-2-benzofuran-4-yl]oxy}oxane-2-carboxylic acid
CAS Registry NumberNot Available
SMILES
C[C@@H]1CC(=O)C2=C(C1)C=CC(O)=C2[C@@H]1OC(=O)C2=C(OC3OC([C@@H](O)[C@H](O)[C@H]3O)C(O)=O)C=CC=C12
InChI Identifier
InChI=1S/C25H24O11/c1-9-7-10-5-6-12(26)17(15(10)13(27)8-9)21-11-3-2-4-14(16(11)24(33)35-21)34-25-20(30)18(28)19(29)22(36-25)23(31)32/h2-6,9,18-22,25-26,28-30H,7-8H2,1H3,(H,31,32)/t9-,18-,19-,20+,21+,22?,25?/m0/s1
InChI KeyKEJOONYJEOSAJT-LLWNZQJOSA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
HMBC NMR[1H, 13C] NMR Spectrum (2D, 600 MHz, C2D6OS, experimental)hkang@konkuk.ac.krNot AvailableNot Available2023-09-27View Spectrum
HSQC NMR[1H, 13C] NMR Spectrum (2D, 600 MHz, C2D6OS, experimental)hkang@konkuk.ac.krNot AvailableNot Available2023-09-27View Spectrum
COSY NMR[1H, 1H] NMR Spectrum (2D, 600 MHz, C2D6OS, experimental)hkang@konkuk.ac.krNot AvailableNot Available2023-09-27View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, C2D6OS, experimental)hkang@konkuk.ac.krNot AvailableNot Available2023-09-27View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, C2D6OS, experimental)hkang@konkuk.ac.krNot AvailableNot Available2023-09-27View Spectrum
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
Chemical Shift Submissions
Not Available
Species
Species of OriginNot Available
Chemical Taxonomy
DescriptionThis compound belongs to the class of organic compounds known as o-glucuronides. These are glucuronides in which the aglycone is linked to the carbohydrate unit through an O-glycosidic bond.
KingdomOrganic compounds
Super ClassOrganic oxygen compounds
ClassOrganooxygen compounds
Sub ClassCarbohydrates and carbohydrate conjugates
Direct ParentO-glucuronides
Alternative Parents
Substituents
  • O-glucuronide
  • 1-o-glucuronide
  • Isobenzofuranone
  • Tetralin
  • Phthalide
  • Isocoumaran
  • Aryl alkyl ketone
  • Aryl ketone
  • 1-hydroxy-2-unsubstituted benzenoid
  • Cyclohexenone
  • Fatty acid ester
  • Beta-hydroxy acid
  • Fatty acyl
  • Alpha-branched alpha,beta-unsaturated-ketone
  • Benzenoid
  • Pyran
  • Oxane
  • Monosaccharide
  • Hydroxy acid
  • Gamma butyrolactone
  • Dicarboxylic acid or derivatives
  • Alpha,beta-unsaturated ketone
  • Alpha,beta-unsaturated carboxylic ester
  • Enoate ester
  • Tetrahydrofuran
  • Enone
  • Acryloyl-group
  • Secondary alcohol
  • Lactone
  • Ketone
  • Carboxylic acid ester
  • Oxacycle
  • Organoheterocyclic compound
  • Carboxylic acid
  • Carboxylic acid derivative
  • Organic oxide
  • Hydrocarbon derivative
  • Alcohol
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP1.35ChemAxon
pKa (Strongest Acidic)2.82ChemAxon
pKa (Strongest Basic)-3.7ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count10ChemAxon
Hydrogen Donor Count5ChemAxon
Polar Surface Area180.05 ŲChemAxon
Rotatable Bond Count4ChemAxon
Refractivity119.71 m³·mol⁻¹ChemAxon
Polarizability48.37 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References