Np mrd loader

Record Information
Version2.0
Created at2023-08-01 08:48:45 UTC
Updated at2024-09-03 04:16:45 UTC
NP-MRD IDNP0331756
Natural Product DOIhttps://doi.org/10.57994/0790
Secondary Accession NumbersNone
Natural Product Identification
Common Name(3S,8S,9S,10R,11S,12S,13S,14R,17S)-11α,12β-acetonide-17β-marsdenin
Description(3S,8S,9S,10R,11S,12S,13S,14R,17S)-11α,12β-acetonide-17β-marsdenin belongs to the class of organic compounds known as vitamin d and derivatives. Vitamin D and derivatives are compounds containing a secosteroid backbone, usually secoergostane or secocholestane. (3S,8S,9S,10R,11S,12S,13S,14R,17S)-11α,12β-acetonide-17β-marsdenin was first documented in 2023 (PMID: 37451564). Based on a literature review very few articles have been published on (3S,8S,9S,10R,11S,12S,13S,14R,17S)-11α,12β-acetonide-17β-marsdenin.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC24H36O6
Average Mass420.5460 Da
Monoisotopic Mass420.25119 Da
IUPAC Name1-[(1S,2R,5S,6S,7S,11S,12S,13R,16S)-1,2,16-trihydroxy-6,9,9,13-tetramethyl-8,10-dioxapentacyclo[10.8.0.0^{2,6}.0^{7,11}.0^{13,18}]icos-18-en-5-yl]ethan-1-one
Traditional Name1-[(1S,2R,5S,6S,7S,11S,12S,13R,16S)-1,2,16-trihydroxy-6,9,9,13-tetramethyl-8,10-dioxapentacyclo[10.8.0.0^{2,6}.0^{7,11}.0^{13,18}]icos-18-en-5-yl]ethanone
CAS Registry NumberNot Available
SMILES
[H][C@]12[C@@H]3OC(C)(C)O[C@H]3[C@]3(C)[C@H](CC[C@]3(O)[C@]1(O)CC=C1C[C@@H](O)CC[C@]21C)C(C)=O
InChI Identifier
InChI=1S/C24H36O6/c1-13(25)16-8-11-24(28)22(16,5)19-17(29-20(2,3)30-19)18-21(4)9-7-15(26)12-14(21)6-10-23(18,24)27/h6,15-19,26-28H,7-12H2,1-5H3/t15-,16+,17-,18+,19+,21-,22-,23-,24+/m0/s1
InChI KeyLGEDROMKEZLWGQ-FPOAEJRGSA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
1D_DEPT NMR13C NMR Spectrum (1D, 101 MHz, C5D5N, experimental)xht8710@163.comNot AvailableNot Available2024-05-09View Spectrum
COSY NMR[1H, 1H] NMR Spectrum (2D, 400 MHz, C5D5N, experimental)xht8710@163.comNot AvailableNot Available2023-08-01View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, C5D5N, experimental)xht8710@163.comNot AvailableNot Available2023-08-01View Spectrum
HMBC NMR[1H, 13C] NMR Spectrum (2D, 400 MHz, C5D5N, experimental)xht8710@163.comNot AvailableNot Available2023-08-01View Spectrum
HSQC NMR[1H, 13C] NMR Spectrum (2D, 400 MHz, C5D5N, experimental)xht8710@163.comNot AvailableNot Available2023-08-01View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, C5D5N, experimental)xht8710@163.comNot AvailableNot Available2023-08-01View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, C5D5N, experimental)xht8710@163.comNot AvailableNot Available2023-08-01View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, C5D5N, experimental)xht8710@163.comNot AvailableNot Available2023-08-01View Spectrum
NOESY NMR[1H, 1H] NMR Spectrum (2D, 400 MHz, C5D5N, experimental)xht8710@163.comNot AvailableNot Available2023-08-01View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, C5D5N, experimental)xht8710@163.comNot AvailableNot Available2023-08-01View Spectrum
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
Chemical Shift Submissions
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
1D NMR1H NMR Spectrum (1D, 400, C5D5deposition_typeN, simulated)Not AvailableNot AvailableNot Available2024-05-09View Spectrum
Species
Species of Origin
Species NameSourceReference
tenacissima
      Not Available
Chemical Taxonomy
DescriptionThis compound belongs to the class of organic compounds known as vitamin d and derivatives. These are compounds containing a secosteroid backbone, usually secoergostane or secocholestane.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassSteroids and steroid derivatives
Sub ClassVitamin D and derivatives
Direct ParentVitamin D and derivatives
Alternative Parents
Substituents
  • Polycyclic triterpenoid
  • Triterpenoid
  • Ketal
  • Tertiary alcohol
  • Cyclic alcohol
  • Meta-dioxolane
  • Secondary alcohol
  • Ketone
  • Oxacycle
  • Organoheterocyclic compound
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Alcohol
  • Aliphatic heteropolycyclic compound
Molecular FrameworkAliphatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP0.93ChemAxon
pKa (Strongest Acidic)12.97ChemAxon
pKa (Strongest Basic)-1.4ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area96.22 ŲChemAxon
Rotatable Bond Count1ChemAxon
Refractivity111.57 m³·mol⁻¹ChemAxon
Polarizability46.05 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General ReferencesNot Available