Showing NP-Card for Dstramonin B (NP0331645)
Record Information | ||||||||||||||||
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Version | 1.0 | |||||||||||||||
Created at | 2023-05-26 16:00:18 UTC | |||||||||||||||
Updated at | 2024-05-14 23:13:22 UTC | |||||||||||||||
NP-MRD ID | NP0331645 | |||||||||||||||
Secondary Accession Numbers | None | |||||||||||||||
Natural Product Identification | ||||||||||||||||
Common Name | Dstramonin B | |||||||||||||||
Description | Not Available | |||||||||||||||
Structure | MOL for NP0331645 (Dstramonin B)Mrv1652305262318002D 28 31 0 0 1 0 999 V2000 0.0142 1.4957 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 0.8373 1.5514 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 1.2006 2.2921 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 0.7408 2.9771 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 1.1041 3.7178 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 0.6443 4.4028 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 1.0076 5.1435 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 0.5478 5.8285 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 0.9111 6.5692 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 1.8308 5.1992 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 2.1941 5.9399 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 2.2906 4.5142 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 3.1137 4.5699 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 1.9273 3.7735 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 2.3871 3.0885 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 1.2971 0.8665 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 1.9132 1.3993 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 2.4962 0.8428 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 2.7199 1.6369 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 3.3162 1.0201 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 3.6052 1.7928 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 3.8068 0.3636 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 3.4965 -0.4177 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 2.6741 -0.5529 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 2.1030 0.0529 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 1.5294 -0.0965 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 1.0275 -0.2460 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 0.6016 0.5138 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 1 2 2 0 0 0 0 2 3 1 0 0 0 0 3 4 1 0 0 0 0 5 4 1 1 0 0 0 5 6 1 0 0 0 0 6 7 1 0 0 0 0 7 8 1 1 0 0 0 8 9 1 0 0 0 0 7 10 1 0 0 0 0 10 11 1 0 0 0 0 10 12 1 0 0 0 0 12 13 1 1 0 0 0 12 14 1 0 0 0 0 5 14 1 0 0 0 0 14 15 1 0 0 0 0 16 2 1 1 0 0 0 16 17 1 0 0 0 0 17 18 1 0 0 0 0 18 19 1 6 0 0 0 18 20 1 0 0 0 0 20 21 1 1 0 0 0 20 22 1 0 0 0 0 22 23 1 0 0 0 0 23 24 2 0 0 0 0 24 25 1 0 0 0 0 18 25 1 0 0 0 0 25 26 1 1 0 0 0 16 26 1 0 0 0 0 25 27 1 0 0 0 0 27 28 1 0 0 0 0 16 28 1 0 0 0 0 M END 3D SDF for NP0331645 (Dstramonin B)Mrv1652305262318002D 28 31 0 0 1 0 999 V2000 0.0142 1.4957 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 0.8373 1.5514 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 1.2006 2.2921 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 0.7408 2.9771 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 1.1041 3.7178 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 0.6443 4.4028 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 1.0076 5.1435 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 0.5478 5.8285 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 0.9111 6.5692 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 1.8308 5.1992 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 2.1941 5.9399 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 2.2906 4.5142 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 3.1137 4.5699 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 1.9273 3.7735 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 2.3871 3.0885 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 1.2971 0.8665 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 1.9132 1.3993 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 2.4962 0.8428 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 2.7199 1.6369 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 3.3162 1.0201 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 3.6052 1.7928 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 3.8068 0.3636 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 3.4965 -0.4177 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 2.6741 -0.5529 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 2.1030 0.0529 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 1.5294 -0.0965 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 1.0275 -0.2460 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 0.6016 0.5138 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 1 2 2 0 0 0 0 2 3 1 0 0 0 0 3 4 1 0 0 0 0 5 4 1 1 0 0 0 5 6 1 0 0 0 0 6 7 1 0 0 0 0 7 8 1 1 0 0 0 8 9 1 0 0 0 0 7 10 1 0 0 0 0 10 11 1 0 0 0 0 10 12 1 0 0 0 0 12 13 1 1 0 0 0 12 14 1 0 0 0 0 5 14 1 0 0 0 0 14 15 1 0 0 0 0 16 2 1 1 0 0 0 16 17 1 0 0 0 0 17 18 1 0 0 0 0 18 19 1 6 0 0 0 18 20 1 0 0 0 0 20 21 1 1 0 0 0 20 22 1 0 0 0 0 22 23 1 0 0 0 0 23 24 2 0 0 0 0 24 25 1 0 0 0 0 18 25 1 0 0 0 0 25 26 1 1 0 0 0 16 26 1 0 0 0 0 25 27 1 0 0 0 0 27 28 1 0 0 0 0 16 28 1 0 0 0 0 M END > <DATABASE_ID> NP0331645 > <DATABASE_NAME> NP-MRD > <SMILES> C[C@H]1CC=C[C@]23CC[C@](C[C@@]12C)(O3)C(=C)CO[C@H]1O[C@@H](CO)C(O)[C@@H](O)C1O > <INCHI_IDENTIFIER> InChI=1S/C21H32O7/c1-12-5-4-6-21-8-7-20(28-21,11-19(12,21)3)13(2)10-26-18-17(25)16(24)15(23)14(9-22)27-18/h4,6,12,14-18,22-25H,2,5,7-11H2,1,3H3/t12-,14-,15?,16+,17?,18-,19-,20+,21-/m0/s1 > <INCHI_KEY> YOAONFYUSMWSJY-JVOXLQJASA-N > <FORMULA> C21H32O7 > <MOLECULAR_WEIGHT> 396.48 > <EXACT_MASS> 396.21480337 > <JCHEM_ACCEPTOR_COUNT> 7 > <JCHEM_ATOM_COUNT> 60 > <JCHEM_AVERAGE_POLARIZABILITY> 42.34036018555219 > <JCHEM_BIOAVAILABILITY> 1 > <JCHEM_DONOR_COUNT> 4 > <JCHEM_FORMAL_CHARGE> 0 > <JCHEM_GHOSE_FILTER> 1 > <JCHEM_IUPAC> (2S,4R,6S)-2-({2-[(1R,5S,6S,8R)-5,6-dimethyl-11-oxatricyclo[6.2.1.0^{1,6}]undec-2-en-8-yl]prop-2-en-1-yl}oxy)-6-(hydroxymethyl)oxane-3,4,5-triol > <JCHEM_LOGP> 0.5103719163333336 > <JCHEM_MDDR_LIKE_RULE> 0 > <JCHEM_NUMBER_OF_RINGS> 4 > <JCHEM_PHYSIOLOGICAL_CHARGE> 0 > <JCHEM_PKA> 13.200069682440095 > <JCHEM_PKA_STRONGEST_ACIDIC> 12.210509031210947 > <JCHEM_PKA_STRONGEST_BASIC> -2.9810835523472523 > <JCHEM_POLAR_SURFACE_AREA> 108.61000000000001 > <JCHEM_REFRACTIVITY> 101.29909999999998 > <JCHEM_ROTATABLE_BOND_COUNT> 5 > <JCHEM_RULE_OF_FIVE> 1 > <JCHEM_TRADITIONAL_IUPAC> (2S,4R,6S)-2-({2-[(1R,5S,6S,8R)-5,6-dimethyl-11-oxatricyclo[6.2.1.0^{1,6}]undec-2-en-8-yl]prop-2-en-1-yl}oxy)-6-(hydroxymethyl)oxane-3,4,5-triol > <JCHEM_VEBER_RULE> 0 $$$$ PDB for NP0331645 (Dstramonin B)HEADER PROTEIN 26-MAY-23 NONE TITLE NULL COMPND NULL SOURCE NULL KEYWDS NULL EXPDTA NULL AUTHOR Marvin REVDAT 1 26-MAY-23 0 HETATM 1 C UNK 0 0.027 2.792 0.000 0.00 0.00 C+0 HETATM 2 C UNK 0 1.563 2.896 0.000 0.00 0.00 C+0 HETATM 3 C UNK 0 2.241 4.279 0.000 0.00 0.00 C+0 HETATM 4 O UNK 0 1.383 5.557 0.000 0.00 0.00 O+0 HETATM 5 C UNK 0 2.061 6.940 0.000 0.00 0.00 C+0 HETATM 6 O UNK 0 1.203 8.219 0.000 0.00 0.00 O+0 HETATM 7 C UNK 0 1.881 9.601 0.000 0.00 0.00 C+0 HETATM 8 C UNK 0 1.023 10.880 0.000 0.00 0.00 C+0 HETATM 9 O UNK 0 1.701 12.262 0.000 0.00 0.00 O+0 HETATM 10 C UNK 0 3.417 9.705 0.000 0.00 0.00 C+0 HETATM 11 O UNK 0 4.096 11.088 0.000 0.00 0.00 O+0 HETATM 12 C UNK 0 4.276 8.427 0.000 0.00 0.00 C+0 HETATM 13 O UNK 0 5.812 8.531 0.000 0.00 0.00 O+0 HETATM 14 C UNK 0 3.598 7.044 0.000 0.00 0.00 C+0 HETATM 15 O UNK 0 4.456 5.765 0.000 0.00 0.00 O+0 HETATM 16 C UNK 0 2.421 1.617 0.000 0.00 0.00 C+0 HETATM 17 C UNK 0 3.571 2.612 0.000 0.00 0.00 C+0 HETATM 18 C UNK 0 4.660 1.573 0.000 0.00 0.00 C+0 HETATM 19 C UNK 0 5.077 3.055 0.000 0.00 0.00 C+0 HETATM 20 C UNK 0 6.190 1.904 0.000 0.00 0.00 C+0 HETATM 21 C UNK 0 6.730 3.347 0.000 0.00 0.00 C+0 HETATM 22 C UNK 0 7.106 0.679 0.000 0.00 0.00 C+0 HETATM 23 C UNK 0 6.527 -0.780 0.000 0.00 0.00 C+0 HETATM 24 C UNK 0 4.992 -1.032 0.000 0.00 0.00 C+0 HETATM 25 C UNK 0 3.926 0.099 0.000 0.00 0.00 C+0 HETATM 26 O UNK 0 2.855 -0.180 0.000 0.00 0.00 O+0 HETATM 27 C UNK 0 1.918 -0.459 0.000 0.00 0.00 C+0 HETATM 28 C UNK 0 1.123 0.959 0.000 0.00 0.00 C+0 CONECT 1 2 CONECT 2 1 3 16 CONECT 3 2 4 CONECT 4 3 5 CONECT 5 4 6 14 CONECT 6 5 7 CONECT 7 6 8 10 CONECT 8 7 9 CONECT 9 8 CONECT 10 7 11 12 CONECT 11 10 CONECT 12 10 13 14 CONECT 13 12 CONECT 14 12 5 15 CONECT 15 14 CONECT 16 2 17 26 28 CONECT 17 16 18 CONECT 18 17 19 20 25 CONECT 19 18 CONECT 20 18 21 22 CONECT 21 20 CONECT 22 20 23 CONECT 23 22 24 CONECT 24 23 25 CONECT 25 24 18 26 27 CONECT 26 25 16 CONECT 27 25 28 CONECT 28 27 16 MASTER 0 0 0 0 0 0 0 0 28 0 62 0 END SMILES for NP0331645 (Dstramonin B)C[C@H]1CC=C[C@]23CC[C@](C[C@@]12C)(O3)C(=C)CO[C@H]1O[C@@H](CO)C(O)[C@@H](O)C1O INCHI for NP0331645 (Dstramonin B)InChI=1S/C21H32O7/c1-12-5-4-6-21-8-7-20(28-21,11-19(12,21)3)13(2)10-26-18-17(25)16(24)15(23)14(9-22)27-18/h4,6,12,14-18,22-25H,2,5,7-11H2,1,3H3/t12-,14-,15?,16+,17?,18-,19-,20+,21-/m0/s1 3D Structure for NP0331645 (Dstramonin B) | |||||||||||||||
Synonyms | Not Available | |||||||||||||||
Chemical Formula | C21H32O7 | |||||||||||||||
Average Mass | 396.4800 Da | |||||||||||||||
Monoisotopic Mass | 396.21480 Da | |||||||||||||||
IUPAC Name | Not Available | |||||||||||||||
Traditional Name | Not Available | |||||||||||||||
CAS Registry Number | Not Available | |||||||||||||||
SMILES | C[C@H]1CC=C[C@]23CC[C@](C[C@@]12C)(O3)C(=C)CO[C@H]1O[C@@H](CO)C(O)[C@@H](O)C1O | |||||||||||||||
InChI Identifier | InChI=1S/C21H32O7/c1-12-5-4-6-21-8-7-20(28-21,11-19(12,21)3)13(2)10-26-18-17(25)16(24)15(23)14(9-22)27-18/h4,6,12,14-18,22-25H,2,5,7-11H2,1,3H3/t12-,14-,15?,16+,17?,18-,19-,20+,21-/m0/s1 | |||||||||||||||
InChI Key | YOAONFYUSMWSJY-JVOXLQJASA-N | |||||||||||||||
Experimental Spectra | ||||||||||||||||
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Predicted Spectra | ||||||||||||||||
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Classification | Not classified | |||||||||||||||
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State | Not Available | |||||||||||||||
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Predicted Properties |
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External Links | Not Available | |||||||||||||||
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