Np mrd loader

Record Information
Version2.0
Created at2023-04-24 20:08:38 UTC
Updated at2024-09-03 04:16:14 UTC
NP-MRD IDNP0331603
Natural Product DOIhttps://doi.org/10.57994/0583
Secondary Accession NumbersNone
Natural Product Identification
Common Namepanepocyclinol D
DescriptionPanepocyclinol D belongs to the class of organic compounds known as sesquiterpenoids. These are terpenes with three consecutive isoprene units. panepocyclinol D was first documented in 2023 (PMID: 37249258). Based on a literature review very few articles have been published on panepocyclinol D.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC22H27ClO7
Average Mass438.9000 Da
Monoisotopic Mass438.14453 Da
IUPAC Name(1S,2S,5S,11R,12S,13S,14R,15S,16R)-9-chloro-11,14,15,16-tetrahydroxy-4,4-dimethyl-2-(2-methylprop-1-en-1-yl)-3-oxatetracyclo[11.4.0.0^{1,5}.0^{7,12}]heptadeca-6,9-diene-8,17-dione
Traditional Name(1S,2S,5S,11R,12S,13S,14R,15S,16R)-9-chloro-11,14,15,16-tetrahydroxy-4,4-dimethyl-2-(2-methylprop-1-en-1-yl)-3-oxatetracyclo[11.4.0.0^{1,5}.0^{7,12}]heptadeca-6,9-diene-8,17-dione
CAS Registry NumberNot Available
SMILES
[H][C@]12C=C3C(=O)C(Cl)=C[C@H](O)[C@@]3([H])[C@]3([H])[C@@H](O)[C@H](O)[C@@H](O)C(=O)[C@]13[C@@H](OC2(C)C)C=C(C)C
InChI Identifier
InChI=1S/C22H27ClO7/c1-8(2)5-13-22-12(21(3,4)30-13)6-9-14(11(24)7-10(23)16(9)25)15(22)17(26)18(27)19(28)20(22)29/h5-7,11-15,17-19,24,26-28H,1-4H3/t11-,12+,13-,14-,15+,17+,18-,19+,22-/m0/s1
InChI KeyQKCGOIJIWLIAQG-JXJMDNMPSA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
NOESY NMR[1H, 1H] NMR Spectrum (2D, 600 MHz, CD3OD, experimental)yuezhouw1120@163.comNot AvailableNot Available2024-05-11View Spectrum
HMBC NMR[1H, 13C] NMR Spectrum (2D, 600 MHz, CD3OD, experimental)yuezhouw1120@163.comNot AvailableNot Available2024-05-11View Spectrum
HSQC NMR[1H, 13C] NMR Spectrum (2D, 600 MHz, CD3OD, experimental)yuezhouw1120@163.comNot AvailableNot Available2024-05-11View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, CD3OD, experimental)yuezhouw1120@163.comNot AvailableNot Available2024-05-11View Spectrum
COSY NMR[1H, 1H] NMR Spectrum (2D, 600 MHz, CD3OD, experimental)yuezhouw1120@163.comNot AvailableNot Available2024-05-11View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, CD3OD, experimental)yuezhouw1120@163.comNot AvailableNot Available2024-05-11View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, CD3OD, experimental)yuezhouw1120@163.comNot AvailableNot Available2024-05-11View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, CD3OD, experimental)yuezhouw1120@163.comNot AvailableNot Available2024-05-11View Spectrum
NOESY NMR[1H, 1H] NMR Spectrum (2D, 600 MHz, CD3OD, experimental)yuezhouw1120@163.comNot AvailableNot Available2023-04-24View Spectrum
HMBC NMR[1H, 13C] NMR Spectrum (2D, 600 MHz, CD3OD, experimental)yuezhouw1120@163.comNot AvailableNot Available2023-04-24View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, CD3OD, experimental)yuezhouw1120@163.comNot AvailableNot Available2023-04-24View Spectrum
HSQC NMR[1H, 13C] NMR Spectrum (2D, 600 MHz, CD3OD, experimental)yuezhouw1120@163.comNot AvailableNot Available2023-04-24View Spectrum
COSY NMR[1H, 1H] NMR Spectrum (2D, 600 MHz, CD3OD, experimental)yuezhouw1120@163.comNot AvailableNot Available2023-04-24View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, CD3OD, experimental)yuezhouw1120@163.comNot AvailableNot Available2023-04-24View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, CD3OD, experimental)yuezhouw1120@163.comNot AvailableNot Available2023-04-24View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, CD3OD, experimental)yuezhouw1120@163.comNot AvailableNot Available2023-04-24View Spectrum
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
rudis
      Not Available
Chemical Taxonomy
DescriptionThis compound belongs to the class of organic compounds known as sesquiterpenoids. These are terpenes with three consecutive isoprene units.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassSesquiterpenoids
Direct ParentSesquiterpenoids
Alternative Parents
Substituents
  • Sesquiterpenoid
  • Naphthofuran
  • Quinomethane
  • O-quinomethane
  • Cyclohexenone
  • Alpha-branched alpha,beta-unsaturated-ketone
  • Monosaccharide
  • Beta-hydroxy ketone
  • Cyclitol or derivatives
  • Acyloin
  • Alpha-haloketone
  • Alpha-chloroketone
  • Alpha,beta-unsaturated ketone
  • Tetrahydrofuran
  • Enone
  • Cyclic alcohol
  • Alpha-hydroxy ketone
  • Acryloyl-group
  • Secondary alcohol
  • Ketone
  • Oxacycle
  • Chloroalkene
  • Haloalkene
  • Organoheterocyclic compound
  • Vinyl halide
  • Vinyl chloride
  • Ether
  • Dialkyl ether
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Organochloride
  • Organohalogen compound
  • Alcohol
  • Aliphatic heteropolycyclic compound
Molecular FrameworkAliphatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP0.44ChemAxon
pKa (Strongest Acidic)11.75ChemAxon
pKa (Strongest Basic)-3.1ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count7ChemAxon
Hydrogen Donor Count4ChemAxon
Polar Surface Area124.29 ŲChemAxon
Rotatable Bond Count1ChemAxon
Refractivity111.28 m³·mol⁻¹ChemAxon
Polarizability43.86 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Li L, Wang Y, Chen N, Li X, Li H, Jin L, Ou Y, Kong XJ, Cao S, Xu Q, Wu X, Han J, Deng X: Exploring Diversity through Dimerization in Natural Products by a Rational Tandem Mass-Based Molecular Network Strategy. Org Lett. 2023 Jun 9;25(22):4016-4021. doi: 10.1021/acs.orglett.3c01038. Epub 2023 May 30. [PubMed:37249258 ]