Showing NP-Card for Discopodinolide B (NP0331575)
Record Information | ||||||||||||||||
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Version | 1.0 | |||||||||||||||
Created at | 2023-04-04 00:13:40 UTC | |||||||||||||||
Updated at | 2024-05-11 04:57:20 UTC | |||||||||||||||
NP-MRD ID | NP0331575 | |||||||||||||||
Secondary Accession Numbers | None | |||||||||||||||
Natural Product Identification | ||||||||||||||||
Common Name | Discopodinolide B | |||||||||||||||
Description | Not Available | |||||||||||||||
Structure | MOL for NP0331575 (Discopodinolide B)Mrv1652304042302132D 40 45 0 0 1 0 999 V2000 1.0924 -1.7461 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 0.8121 -0.9702 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 0.5318 -0.1943 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 1.0636 0.4364 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 1.8758 0.2912 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 2.1561 -0.4847 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 2.4364 -1.2606 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 1.6242 -1.1154 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 1.3439 -0.3395 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 1.9045 -1.8914 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 2.7167 -2.0366 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 3.2485 -1.4059 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 3.6083 -2.1482 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 2.9682 -0.6299 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 2.7705 0.1710 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 3.6195 -0.1236 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 4.3024 -0.5866 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 5.0783 -0.3063 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 4.0730 -1.3791 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 4.8339 -1.6979 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 4.1944 -2.1951 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 3.5485 -2.7082 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 3.6699 -3.5242 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 4.9618 -2.4979 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 5.7292 -2.8008 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 5.0832 -3.3140 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 5.8506 -3.6168 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 6.4966 -3.1037 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 7.2640 -3.4066 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 6.3752 -2.2877 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 7.0212 -1.7745 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 5.6078 -1.9848 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 5.9720 -4.4329 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 0.2515 0.5816 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 -0.2803 -0.0491 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 -0.5606 0.7268 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 -0.8121 -0.6798 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.5318 -1.4557 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 0.2803 -1.6009 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 0.5606 -2.3768 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 2 1 1 6 0 0 0 2 3 1 0 0 0 0 3 4 1 0 0 0 0 4 5 1 0 0 0 0 5 6 1 0 0 0 0 6 7 1 6 0 0 0 6 8 1 0 0 0 0 2 8 1 0 0 0 0 8 9 1 1 0 0 0 8 10 1 0 0 0 0 10 11 1 0 0 0 0 11 12 1 0 0 0 0 12 13 1 6 0 0 0 12 14 1 0 0 0 0 6 14 1 0 0 0 0 14 15 1 1 0 0 0 14 16 1 0 0 0 0 16 17 1 0 0 0 0 17 18 1 1 0 0 0 17 19 1 0 0 0 0 12 19 1 0 0 0 0 19 20 1 1 0 0 0 19 21 1 6 0 0 0 21 22 1 1 0 0 0 22 23 1 0 0 0 0 24 21 1 1 0 0 0 24 25 1 1 0 0 0 24 26 1 0 0 0 0 26 27 1 0 0 0 0 27 28 1 0 0 0 0 28 29 1 0 0 0 0 28 30 2 0 0 0 0 30 31 1 0 0 0 0 30 32 1 0 0 0 0 24 32 1 0 0 0 0 27 33 2 0 0 0 0 3 34 1 1 0 0 0 4 34 1 1 0 0 0 3 35 1 0 0 0 0 35 36 1 1 0 0 0 35 37 1 0 0 0 0 37 38 2 0 0 0 0 38 39 1 0 0 0 0 2 39 1 0 0 0 0 39 40 2 0 0 0 0 M END 3D SDF for NP0331575 (Discopodinolide B)Mrv1652304042302132D 40 45 0 0 1 0 999 V2000 1.0924 -1.7461 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 0.8121 -0.9702 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 0.5318 -0.1943 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 1.0636 0.4364 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 1.8758 0.2912 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 2.1561 -0.4847 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 2.4364 -1.2606 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 1.6242 -1.1154 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 1.3439 -0.3395 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 1.9045 -1.8914 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 2.7167 -2.0366 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 3.2485 -1.4059 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 3.6083 -2.1482 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 2.9682 -0.6299 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 2.7705 0.1710 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 3.6195 -0.1236 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 4.3024 -0.5866 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 5.0783 -0.3063 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 4.0730 -1.3791 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 4.8339 -1.6979 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 4.1944 -2.1951 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 3.5485 -2.7082 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 3.6699 -3.5242 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 4.9618 -2.4979 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 5.7292 -2.8008 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 5.0832 -3.3140 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 5.8506 -3.6168 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 6.4966 -3.1037 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 7.2640 -3.4066 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 6.3752 -2.2877 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 7.0212 -1.7745 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 5.6078 -1.9848 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 5.9720 -4.4329 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 0.2515 0.5816 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 -0.2803 -0.0491 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 -0.5606 0.7268 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 -0.8121 -0.6798 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.5318 -1.4557 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 0.2803 -1.6009 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 0.5606 -2.3768 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 2 1 1 6 0 0 0 2 3 1 0 0 0 0 3 4 1 0 0 0 0 4 5 1 0 0 0 0 5 6 1 0 0 0 0 6 7 1 6 0 0 0 6 8 1 0 0 0 0 2 8 1 0 0 0 0 8 9 1 1 0 0 0 8 10 1 0 0 0 0 10 11 1 0 0 0 0 11 12 1 0 0 0 0 12 13 1 6 0 0 0 12 14 1 0 0 0 0 6 14 1 0 0 0 0 14 15 1 1 0 0 0 14 16 1 0 0 0 0 16 17 1 0 0 0 0 17 18 1 1 0 0 0 17 19 1 0 0 0 0 12 19 1 0 0 0 0 19 20 1 1 0 0 0 19 21 1 6 0 0 0 21 22 1 1 0 0 0 22 23 1 0 0 0 0 24 21 1 1 0 0 0 24 25 1 1 0 0 0 24 26 1 0 0 0 0 26 27 1 0 0 0 0 27 28 1 0 0 0 0 28 29 1 0 0 0 0 28 30 2 0 0 0 0 30 31 1 0 0 0 0 30 32 1 0 0 0 0 24 32 1 0 0 0 0 27 33 2 0 0 0 0 3 34 1 1 0 0 0 4 34 1 1 0 0 0 3 35 1 0 0 0 0 35 36 1 1 0 0 0 35 37 1 0 0 0 0 37 38 2 0 0 0 0 38 39 1 0 0 0 0 2 39 1 0 0 0 0 39 40 2 0 0 0 0 M END > <DATABASE_ID> NP0331575 > <DATABASE_NAME> NP-MRD > <SMILES> [H][C@@]12C[C@@H](O)[C@](O)([C@H](CO)[C@]3([H])CC(C)=C(C)C(=O)O3)[C@@]1(C)CC[C@@]1([H])[C@@]2([H])C[C@@H]2O[C@@]22[C@H](O)C=CC(=O)[C@]12C > <INCHI_IDENTIFIER> InChI=1S/C28H38O8/c1-13-9-19(35-24(33)14(13)2)18(12-29)27(34)22(32)11-17-15-10-23-28(36-23)21(31)6-5-20(30)26(28,4)16(15)7-8-25(17,27)3/h5-6,15-19,21-23,29,31-32,34H,7-12H2,1-4H3/t15-,16+,17+,18-,19+,21-,22-,23+,25+,26+,27-,28+/m1/s1 > <INCHI_KEY> SKALUBUETAEIIO-OOKAJNHDSA-N > <FORMULA> C28H38O8 > <MOLECULAR_WEIGHT> 502.604 > <EXACT_MASS> 502.256668184 > <JCHEM_ACCEPTOR_COUNT> 7 > <JCHEM_ATOM_COUNT> 74 > <JCHEM_AVERAGE_POLARIZABILITY> 53.348994045157184 > <JCHEM_BIOAVAILABILITY> 1 > <JCHEM_DONOR_COUNT> 4 > <JCHEM_FORMAL_CHARGE> 0 > <JCHEM_GHOSE_FILTER> 0 > <JCHEM_IUPAC> (1S,2R,6R,7S,9S,11S,12S,14R,15S,16S)-15-[(1R)-1-[(2S)-4,5-dimethyl-6-oxo-3,6-dihydro-2H-pyran-2-yl]-2-hydroxyethyl]-6,14,15-trihydroxy-2,16-dimethyl-8-oxapentacyclo[9.7.0.0^{2,7}.0^{7,9}.0^{12,16}]octadec-4-en-3-one > <JCHEM_LOGP> 1.4944991603333324 > <JCHEM_MDDR_LIKE_RULE> 0 > <JCHEM_NUMBER_OF_RINGS> 6 > <JCHEM_PHYSIOLOGICAL_CHARGE> 0 > <JCHEM_PKA> 13.583617633737394 > <JCHEM_PKA_STRONGEST_ACIDIC> 12.938700916244734 > <JCHEM_PKA_STRONGEST_BASIC> -2.6713037472097323 > <JCHEM_POLAR_SURFACE_AREA> 136.82000000000002 > <JCHEM_REFRACTIVITY> 129.77869999999996 > <JCHEM_ROTATABLE_BOND_COUNT> 3 > <JCHEM_RULE_OF_FIVE> 0 > <JCHEM_TRADITIONAL_IUPAC> (1S,2R,6R,7S,9S,11S,12S,14R,15S,16S)-15-[(1R)-1-[(2S)-4,5-dimethyl-6-oxo-2,3-dihydropyran-2-yl]-2-hydroxyethyl]-6,14,15-trihydroxy-2,16-dimethyl-8-oxapentacyclo[9.7.0.0^{2,7}.0^{7,9}.0^{12,16}]octadec-4-en-3-one > <JCHEM_VEBER_RULE> 0 $$$$ PDB for NP0331575 (Discopodinolide B)HEADER PROTEIN 04-APR-23 NONE TITLE NULL COMPND NULL SOURCE NULL KEYWDS NULL EXPDTA NULL AUTHOR Marvin REVDAT 1 04-APR-23 0 HETATM 1 C UNK 0 2.039 -3.259 0.000 0.00 0.00 C+0 HETATM 2 C UNK 0 1.516 -1.811 0.000 0.00 0.00 C+0 HETATM 3 C UNK 0 0.993 -0.363 0.000 0.00 0.00 C+0 HETATM 4 C UNK 0 1.985 0.815 0.000 0.00 0.00 C+0 HETATM 5 C UNK 0 3.501 0.544 0.000 0.00 0.00 C+0 HETATM 6 C UNK 0 4.025 -0.905 0.000 0.00 0.00 C+0 HETATM 7 H UNK 0 4.548 -2.353 0.000 0.00 0.00 H+0 HETATM 8 C UNK 0 3.032 -2.082 0.000 0.00 0.00 C+0 HETATM 9 H UNK 0 2.509 -0.634 0.000 0.00 0.00 H+0 HETATM 10 C UNK 0 3.555 -3.531 0.000 0.00 0.00 C+0 HETATM 11 C UNK 0 5.071 -3.802 0.000 0.00 0.00 C+0 HETATM 12 C UNK 0 6.064 -2.624 0.000 0.00 0.00 C+0 HETATM 13 C UNK 0 6.736 -4.010 0.000 0.00 0.00 C+0 HETATM 14 C UNK 0 5.541 -1.176 0.000 0.00 0.00 C+0 HETATM 15 H UNK 0 5.172 0.319 0.000 0.00 0.00 H+0 HETATM 16 C UNK 0 6.756 -0.231 0.000 0.00 0.00 C+0 HETATM 17 C UNK 0 8.031 -1.095 0.000 0.00 0.00 C+0 HETATM 18 O UNK 0 9.479 -0.572 0.000 0.00 0.00 O+0 HETATM 19 C UNK 0 7.603 -2.574 0.000 0.00 0.00 C+0 HETATM 20 O UNK 0 9.023 -3.169 0.000 0.00 0.00 O+0 HETATM 21 C UNK 0 7.830 -4.097 0.000 0.00 0.00 C+0 HETATM 22 C UNK 0 6.624 -5.055 0.000 0.00 0.00 C+0 HETATM 23 O UNK 0 6.850 -6.579 0.000 0.00 0.00 O+0 HETATM 24 C UNK 0 9.262 -4.663 0.000 0.00 0.00 C+0 HETATM 25 H UNK 0 10.695 -5.228 0.000 0.00 0.00 H+0 HETATM 26 O UNK 0 9.489 -6.186 0.000 0.00 0.00 O+0 HETATM 27 C UNK 0 10.921 -6.751 0.000 0.00 0.00 C+0 HETATM 28 C UNK 0 12.127 -5.794 0.000 0.00 0.00 C+0 HETATM 29 C UNK 0 13.560 -6.359 0.000 0.00 0.00 C+0 HETATM 30 C UNK 0 11.900 -4.270 0.000 0.00 0.00 C+0 HETATM 31 C UNK 0 13.106 -3.312 0.000 0.00 0.00 C+0 HETATM 32 C UNK 0 10.468 -3.705 0.000 0.00 0.00 C+0 HETATM 33 O UNK 0 11.148 -8.275 0.000 0.00 0.00 O+0 HETATM 34 O UNK 0 0.470 1.086 0.000 0.00 0.00 O+0 HETATM 35 C UNK 0 -0.523 -0.092 0.000 0.00 0.00 C+0 HETATM 36 O UNK 0 -1.046 1.357 0.000 0.00 0.00 O+0 HETATM 37 C UNK 0 -1.516 -1.269 0.000 0.00 0.00 C+0 HETATM 38 C UNK 0 -0.993 -2.717 0.000 0.00 0.00 C+0 HETATM 39 C UNK 0 0.523 -2.988 0.000 0.00 0.00 C+0 HETATM 40 O UNK 0 1.046 -4.437 0.000 0.00 0.00 O+0 CONECT 1 2 CONECT 2 1 3 8 39 CONECT 3 2 4 34 35 CONECT 4 3 5 34 CONECT 5 4 6 CONECT 6 5 7 8 14 CONECT 7 6 CONECT 8 6 2 9 10 CONECT 9 8 CONECT 10 8 11 CONECT 11 10 12 CONECT 12 11 13 14 19 CONECT 13 12 CONECT 14 12 6 15 16 CONECT 15 14 CONECT 16 14 17 CONECT 17 16 18 19 CONECT 18 17 CONECT 19 17 12 20 21 CONECT 20 19 CONECT 21 19 22 24 CONECT 22 21 23 CONECT 23 22 CONECT 24 21 25 26 32 CONECT 25 24 CONECT 26 24 27 CONECT 27 26 28 33 CONECT 28 27 29 30 CONECT 29 28 CONECT 30 28 31 32 CONECT 31 30 CONECT 32 30 24 CONECT 33 27 CONECT 34 3 4 CONECT 35 3 36 37 CONECT 36 35 CONECT 37 35 38 CONECT 38 37 39 CONECT 39 38 2 40 CONECT 40 39 MASTER 0 0 0 0 0 0 0 0 40 0 90 0 END SMILES for NP0331575 (Discopodinolide B)[H][C@@]12C[C@@H](O)[C@](O)([C@H](CO)[C@]3([H])CC(C)=C(C)C(=O)O3)[C@@]1(C)CC[C@@]1([H])[C@@]2([H])C[C@@H]2O[C@@]22[C@H](O)C=CC(=O)[C@]12C INCHI for NP0331575 (Discopodinolide B)InChI=1S/C28H38O8/c1-13-9-19(35-24(33)14(13)2)18(12-29)27(34)22(32)11-17-15-10-23-28(36-23)21(31)6-5-20(30)26(28,4)16(15)7-8-25(17,27)3/h5-6,15-19,21-23,29,31-32,34H,7-12H2,1-4H3/t15-,16+,17+,18-,19+,21-,22-,23+,25+,26+,27-,28+/m1/s1 3D Structure for NP0331575 (Discopodinolide B) | |||||||||||||||
Synonyms | Not Available | |||||||||||||||
Chemical Formula | C28H38O8 | |||||||||||||||
Average Mass | 502.6040 Da | |||||||||||||||
Monoisotopic Mass | 502.25667 Da | |||||||||||||||
IUPAC Name | Not Available | |||||||||||||||
Traditional Name | Not Available | |||||||||||||||
CAS Registry Number | Not Available | |||||||||||||||
SMILES | [H][C@@]12C[C@@H](O)[C@](O)([C@H](CO)[C@]3([H])CC(C)=C(C)C(=O)O3)[C@@]1(C)CC[C@@]1([H])[C@@]2([H])C[C@@H]2O[C@@]22[C@H](O)C=CC(=O)[C@]12C | |||||||||||||||
InChI Identifier | InChI=1S/C28H38O8/c1-13-9-19(35-24(33)14(13)2)18(12-29)27(34)22(32)11-17-15-10-23-28(36-23)21(31)6-5-20(30)26(28,4)16(15)7-8-25(17,27)3/h5-6,15-19,21-23,29,31-32,34H,7-12H2,1-4H3/t15-,16+,17+,18-,19+,21-,22-,23+,25+,26+,27-,28+/m1/s1 | |||||||||||||||
InChI Key | SKALUBUETAEIIO-OOKAJNHDSA-N | |||||||||||||||
Experimental Spectra | ||||||||||||||||
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Predicted Spectra | ||||||||||||||||
Not Available | ||||||||||||||||
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Species | ||||||||||||||||
Species of Origin |
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Chemical Taxonomy | ||||||||||||||||
Classification | Not classified | |||||||||||||||
Physical Properties | ||||||||||||||||
State | Not Available | |||||||||||||||
Experimental Properties |
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Predicted Properties |
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External Links | ||||||||||||||||
External Links | Not Available | |||||||||||||||
References | ||||||||||||||||
General References |
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