Np mrd loader

Record Information
Version2.0
Created at2023-01-30 20:00:32 UTC
Updated at2024-09-03 04:15:51 UTC
NP-MRD IDNP0331475
Natural Product DOIhttps://doi.org/10.57994/0425
Secondary Accession NumbersNone
Natural Product Identification
Common NameBerkeleyone C methyl ester
DescriptionBerkeleyone C methyl ester belongs to the class of organic compounds known as diterpenoids. These are terpene compounds formed by four isoprene units. Berkeleyone C methyl ester was first documented in 2023 (PMID: 36526742). Based on a literature review very few articles have been published on Berkeleyone C methyl ester.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC27H36O7
Average Mass472.5780 Da
Monoisotopic Mass472.24610 Da
IUPAC Namemethyl (1R,2S,6S,7S,9R)-11-hydroxy-6-(3-methoxy-3-oxopropyl)-2,6,9,11-tetramethyl-13-methylidene-10,12-dioxo-5-(prop-1-en-2-yl)tricyclo[7.3.1.0^{2,7}]tridec-4-ene-1-carboxylate
Traditional Namemethyl (1R,2S,6S,7S,9R)-11-hydroxy-6-(3-methoxy-3-oxopropyl)-2,6,9,11-tetramethyl-13-methylidene-10,12-dioxo-5-(prop-1-en-2-yl)tricyclo[7.3.1.0^{2,7}]tridec-4-ene-1-carboxylate
CAS Registry NumberNot Available
SMILES
[H][C@@]12C[C@]3(C)C(=C)[C@@](C(=O)OC)(C(=O)C(C)(O)C3=O)[C@@]1(C)CC=C(C(C)=C)[C@@]2(C)CCC(=O)OC
InChI Identifier
InChI=1S/C27H36O7/c1-15(2)17-10-13-25(6)18(23(17,4)12-11-19(28)33-8)14-24(5)16(3)27(25,22(31)34-9)21(30)26(7,32)20(24)29/h10,18,32H,1,3,11-14H2,2,4-9H3/t18-,23+,24+,25-,26?,27-/m0/s1
InChI KeyQOEQXNBFVKZFLG-ZNKBADBUSA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
HMBC NMR[1H, 13C] NMR Spectrum (2D, 400 MHz, CDCL3, experimental)hyeriku@gmail.comNot AvailableNot Available2024-05-11View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, CDCL3, experimental)hyeriku@gmail.comNot AvailableNot Available2024-05-11View Spectrum
COSY NMR[1H, 1H] NMR Spectrum (2D, 400 MHz, CDCL3, experimental)hyeriku@gmail.comNot AvailableNot Available2024-05-11View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, CDCL3, experimental)hyeriku@gmail.comNot AvailableNot Available2024-05-11View Spectrum
HSQC NMR[1H, 13C] NMR Spectrum (2D, 400 MHz, CDCL3, experimental)hyeriku@gmail.comNot AvailableNot Available2024-05-11View Spectrum
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
sp. SSW03M2 GY
      Not Available
Chemical Taxonomy
DescriptionThis compound belongs to the class of organic compounds known as diterpenoids. These are terpene compounds formed by four isoprene units.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassDiterpenoids
Direct ParentDiterpenoids
Alternative Parents
Substituents
  • Diterpenoid
  • Fatty acid methyl ester
  • Fatty acid ester
  • Beta-keto acid
  • Fatty acyl
  • Keto acid
  • Dicarboxylic acid or derivatives
  • Acyloin
  • Methyl ester
  • Tertiary alcohol
  • Cyclic alcohol
  • Alpha-hydroxy ketone
  • Ketone
  • Carboxylic acid ester
  • Carboxylic acid derivative
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Alcohol
  • Aliphatic homopolycyclic compound
Molecular FrameworkAliphatic homopolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP3.86ChemAxon
pKa (Strongest Acidic)11.48ChemAxon
pKa (Strongest Basic)-4.3ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count5ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area106.97 ŲChemAxon
Rotatable Bond Count7ChemAxon
Refractivity126.71 m³·mol⁻¹ChemAxon
Polarizability49.95 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General ReferencesNot Available