NP-MRD: Showing NP-Card for 12,12-dimethyl-6-methylidene-3-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-17-oxapentacyclo[7.6.2.1⁵,⁸.0¹,¹¹.0²,⁸]octadecane-7,9,10,15-tetrol (NP0330401)

Jump To Section:

Identification Spectra BioTaxonomy ChemoTaxonomy Physical properties Links References XML

Record Information

Version

2.0

Created at

2022-09-12 15:43:18 UTC

Updated at

2022-09-12 15:43:18 UTC

NP-MRD ID

NP0330401

Secondary Accession Numbers

None

Natural Product Identification

Common Name

12,12-dimethyl-6-methylidene-3-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-17-oxapentacyclo[7.6.2.1⁵,⁸.0¹,¹¹.0²,⁸]octadecane-7,9,10,15-tetrol

Description

12,12-Dimethyl-6-methylidene-3-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-17-oxapentacyclo[7.6.2.1⁵,⁸.0¹,¹¹.0²,⁸]Octadecane-7,9,10,15-tetrol belongs to the class of organic compounds known as diterpene glycosides. These are diterpenoids in which an isoprene unit is glycosylated. 12,12-dimethyl-6-methylidene-3-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-17-oxapentacyclo[7.6.2.1⁵,⁸.0¹,¹¹.0²,⁸]octadecane-7,9,10,15-tetrol is found in Isodon parvifolius. 12,12-Dimethyl-6-methylidene-3-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-17-oxapentacyclo[7.6.2.1⁵,⁸.0¹,¹¹.0²,⁸]Octadecane-7,9,10,15-tetrol is an extremely weak basic (essentially neutral) compound (based on its pKa).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1533004191516102D          

 37 42  0  0  0  0            999 V2000
    7.4067    1.2383    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7458    0.7445    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3086    1.4441    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.3037    0.1144    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1609   -0.7168    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3968   -1.0675    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3055   -1.8875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7123   -0.5450    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0752   -0.1345    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2587    0.6033    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.6138    0.9559    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0777    1.5830    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.5163    1.1547    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8471    1.9104    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.9848    0.3526    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2789    0.0999    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6847   -0.5099    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9703   -0.9149    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5696   -1.5308    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4198   -1.4903    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8775   -2.1766    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.5120   -2.9162    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9697   -3.6026    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.6042   -4.3422    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0619   -5.0285    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8852   -4.9753    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7809   -4.3954    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4154   -5.1350    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.3232   -3.7091    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4999   -3.7623    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.6887   -2.9695    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2309   -2.2831    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.7872   -0.7139    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8245   -0.0683    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0530    0.2240    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4857    0.4618    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3837    1.2805    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  2  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  6  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 11 13  1  0  0  0  0
 13 14  1  0  0  0  0
 13 15  1  0  0  0  0
  2 15  1  0  0  0  0
  8 15  1  0  0  0  0
 11 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 24 27  1  0  0  0  0
 27 28  1  0  0  0  0
 27 29  1  0  0  0  0
 29 30  1  0  0  0  0
 29 31  1  0  0  0  0
 22 31  1  0  0  0  0
 31 32  1  0  0  0  0
 20 33  1  0  0  0  0
  8 33  1  0  0  0  0
 16 33  1  0  0  0  0
 18 34  1  0  0  0  0
 34 35  2  0  0  0  0
 34 36  1  0  0  0  0
 16 36  1  0  0  0  0
 36 37  1  0  0  0  0
M  END

     RDKit          3D

 77 82  0  0  0  0  0  0  0  0999 V2000
   -1.4330    4.5324   -1.7766 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2164    3.4655   -1.0579 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0890    3.0214   -0.5040 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.5287    1.8670   -1.3814 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5115    0.5271   -0.5803 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.5076    0.6877    0.3270 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.6552   -0.0104    0.0955 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.7407    0.8342   -0.2425 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.6364   -0.0384   -0.8712 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.8560    0.6720   -1.3925 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5763    1.3070   -0.3945 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0267   -1.2174   -0.0508 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.4883   -2.3930   -0.5801 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.5233   -1.0725    1.3434 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.1568   -0.0232    2.0236 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0216   -0.8308    1.2984 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.7275   -0.1547    2.4970 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8786    0.3414   -0.1720 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.4782    1.6114    0.4467 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.4093    2.5716    0.8605 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2022    2.4506   -0.6241 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.3359    3.0307   -0.0523 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4189    1.1903    1.5241 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.0467    2.3103    2.0910 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7145    0.5631    2.5220 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9810   -0.5194    2.0893 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2672   -0.8482    0.6176 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.5520   -2.1052    0.3088 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.5577   -2.8854    1.4939 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1045   -2.9637   -0.7717 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2970   -2.3900   -1.4919 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3046   -1.7909   -0.5785 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2308   -2.9351   -0.1203 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2326   -0.9211   -1.4403 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7672   -1.0575    0.5852 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.4485    0.2691    0.8719 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.5306    0.0834    1.7431 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4021    4.8313   -2.1684 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6070    5.1918   -2.0195 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8437    3.8063   -0.4586 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5592    2.0423   -1.7225 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1037    1.7220   -2.2712 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7854   -0.2162   -1.3829 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5007   -0.6469   -0.7848 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0749   -0.4177   -1.7770 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6180    1.4169   -2.1813 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.5259   -0.0663   -1.8787 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.1307    2.0090   -0.8417 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.1364   -1.3635   -0.0963 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1006   -2.2919   -1.4738 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7059   -1.9904    1.9058 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0272   -0.4072    2.3642 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5391   -1.8031    1.3392 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3191   -0.4797    3.2426 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4736    0.2562   -1.1455 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9283    3.4566    1.2905 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3325    2.2400    1.5564 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5221    1.8439   -1.4763 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9211    3.3739   -0.7901 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5709    2.6000    2.9336 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0661   -0.5094    2.3470 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4171   -1.4106    2.6360 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5093   -1.9390    0.0922 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1205   -3.7520    1.3627 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3379   -3.1822   -1.5745 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4020   -3.9841   -0.4076 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9971   -1.7338   -2.3551 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7931   -3.2591   -2.0221 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4256   -3.6371   -0.9381 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1338   -2.5353    0.3559 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6444   -3.4724    0.6616 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6387   -1.6460   -2.2100 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6999   -0.1551   -1.9993 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1113   -0.5774   -0.8730 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9871   -1.6851    1.5042 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8227    0.7561   -0.0482 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3531    0.4363    2.6482 H   0  0  0  0  0  0  0  0  0  0  0  0
 33 32  1  0
 32 34  1  0
 32 31  1  0
 31 30  1  0
 30 28  1  0
 28 29  1  0
 28 27  1  0
 27 26  1  1
 26 25  1  0
 25 23  1  0
 23 24  1  1
 23 36  1  0
 36 37  1  0
 36 35  1  0
 23 19  1  0
 19 20  1  1
 20  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
  9 12  1  0
 12 13  1  0
 12 14  1  0
 14 15  1  0
 14 16  1  0
 16 17  1  0
  5 18  1  0
  3  2  1  0
  2  1  2  3
  2 21  1  0
 21 22  1  0
 35 32  1  0
 18 19  1  0
 35 27  1  0
 21 19  1  0
 18 27  1  0
 16  7  1  0
 33 69  1  0
 33 70  1  0
 33 71  1  0
 34 72  1  0
 34 73  1  0
 34 74  1  0
 31 67  1  0
 31 68  1  0
 30 65  1  0
 30 66  1  0
 28 63  1  6
 29 64  1  0
 26 61  1  0
 26 62  1  0
 24 60  1  0
 36 76  1  6
 37 77  1  0
 35 75  1  1
 20 56  1  0
 20 57  1  0
  3 40  1  1
  4 41  1  0
  4 42  1  0
  5 43  1  6
  7 44  1  6
  9 45  1  6
 10 46  1  0
 10 47  1  0
 11 48  1  0
 12 49  1  1
 13 50  1  0
 14 51  1  1
 15 52  1  0
 16 53  1  1
 17 54  1  0
 18 55  1  6
  1 38  1  0
  1 39  1  0
 21 58  1  6
 22 59  1  0
M  END


  Mrv1533004191516102D          

 37 42  0  0  0  0            999 V2000
    7.4067    1.2383    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7458    0.7445    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3086    1.4441    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.3037    0.1144    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1609   -0.7168    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3968   -1.0675    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3055   -1.8875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7123   -0.5450    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0752   -0.1345    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2587    0.6033    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.6138    0.9559    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0777    1.5830    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.5163    1.1547    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8471    1.9104    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.9848    0.3526    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2789    0.0999    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6847   -0.5099    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9703   -0.9149    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5696   -1.5308    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4198   -1.4903    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8775   -2.1766    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.5120   -2.9162    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9697   -3.6026    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.6042   -4.3422    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0619   -5.0285    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8852   -4.9753    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7809   -4.3954    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4154   -5.1350    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.3232   -3.7091    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4999   -3.7623    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.6887   -2.9695    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2309   -2.2831    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.7872   -0.7139    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8245   -0.0683    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0530    0.2240    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4857    0.4618    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3837    1.2805    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  2  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  6  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 11 13  1  0  0  0  0
 13 14  1  0  0  0  0
 13 15  1  0  0  0  0
  2 15  1  0  0  0  0
  8 15  1  0  0  0  0
 11 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 24 27  1  0  0  0  0
 27 28  1  0  0  0  0
 27 29  1  0  0  0  0
 29 30  1  0  0  0  0
 29 31  1  0  0  0  0
 22 31  1  0  0  0  0
 31 32  1  0  0  0  0
 20 33  1  0  0  0  0
  8 33  1  0  0  0  0
 16 33  1  0  0  0  0
 18 34  1  0  0  0  0
 34 35  2  0  0  0  0
 34 36  1  0  0  0  0
 16 36  1  0  0  0  0
 36 37  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0330401

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC1(C)CCC(O)C23COC(O)(C(O)C12)C12CC(CC(OC4OC(CO)C(O)C(O)C4O)C31)C(=C)C2O

> <INCHI_IDENTIFIER>
InChI=1S/C26H40O11/c1-10-11-6-12(36-22-17(31)16(30)15(29)13(8-27)37-22)18-24-9-35-26(34,25(18,7-11)20(10)32)21(33)19(24)23(2,3)5-4-14(24)28/h11-22,27-34H,1,4-9H2,2-3H3

> <INCHI_KEY>
AEHSHPSACZNIDN-UHFFFAOYSA-N

> <FORMULA>
C26H40O11

> <MOLECULAR_WEIGHT>
528.595

> <EXACT_MASS>
528.257062108

> <JCHEM_ACCEPTOR_COUNT>
11

> <JCHEM_ATOM_COUNT>
77

> <JCHEM_AVERAGE_POLARIZABILITY>
53.67007763278339

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
8

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
12,12-dimethyl-6-methylidene-3-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-17-oxapentacyclo[7.6.2.1⁵,⁸.0¹,¹¹.0²,⁸]octadecane-7,9,10,15-tetrol

> <ALOGPS_LOGP>
-1.33

> <JCHEM_LOGP>
-2.305689521333333

> <ALOGPS_LOGS>
-1.48

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
6

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
12.203831662891348

> <JCHEM_PKA_STRONGEST_ACIDIC>
10.67584473554559

> <JCHEM_PKA_STRONGEST_BASIC>
-2.9721795609847304

> <JCHEM_POLAR_SURFACE_AREA>
189.52999999999997

> <JCHEM_REFRACTIVITY>
125.06110000000002

> <JCHEM_ROTATABLE_BOND_COUNT>
3

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
1.74e+01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
12,12-dimethyl-6-methylidene-3-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-17-oxapentacyclo[7.6.2.1⁵,⁸.0¹,¹¹.0²,⁸]octadecane-7,9,10,15-tetrol

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 19-APR-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   19-APR-15         0                                  
HETATM    1  C   UNK     0      13.826   2.311   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      12.592   1.390   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      11.776   2.696   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      13.634   0.214   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      13.367  -1.338   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      11.941  -1.993   0.000  0.00  0.00           C+0
HETATM    7  O   UNK     0      11.770  -3.523   0.000  0.00  0.00           O+0
HETATM    8  C   UNK     0      10.663  -1.017   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       9.474  -0.251   0.000  0.00  0.00           C+0
HETATM   10  O   UNK     0       9.816   1.126   0.000  0.00  0.00           O+0
HETATM   11  C   UNK     0       8.612   1.784   0.000  0.00  0.00           C+0
HETATM   12  O   UNK     0       7.612   2.955   0.000  0.00  0.00           O+0
HETATM   13  C   UNK     0      10.297   2.155   0.000  0.00  0.00           C+0
HETATM   14  O   UNK     0      10.915   3.566   0.000  0.00  0.00           O+0
HETATM   15  C   UNK     0      11.172   0.658   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       7.987   0.186   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       6.878  -0.952   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       5.545  -1.708   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       6.663  -2.857   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       8.250  -2.782   0.000  0.00  0.00           C+0
HETATM   21  O   UNK     0       9.105  -4.063   0.000  0.00  0.00           O+0
HETATM   22  C   UNK     0       8.422  -5.444   0.000  0.00  0.00           C+0
HETATM   23  O   UNK     0       9.277  -6.725   0.000  0.00  0.00           O+0
HETATM   24  C   UNK     0       8.594  -8.105   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       9.449  -9.387   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0      10.986  -9.287   0.000  0.00  0.00           O+0
HETATM   27  C   UNK     0       7.058  -8.205   0.000  0.00  0.00           C+0
HETATM   28  O   UNK     0       6.375  -9.585   0.000  0.00  0.00           O+0
HETATM   29  C   UNK     0       6.203  -6.924   0.000  0.00  0.00           C+0
HETATM   30  O   UNK     0       4.666  -7.023   0.000  0.00  0.00           O+0
HETATM   31  C   UNK     0       6.886  -5.543   0.000  0.00  0.00           C+0
HETATM   32  O   UNK     0       6.031  -4.262   0.000  0.00  0.00           O+0
HETATM   33  C   UNK     0       8.936  -1.333   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0       5.272  -0.128   0.000  0.00  0.00           C+0
HETATM   35  C   UNK     0       3.832   0.418   0.000  0.00  0.00           C+0
HETATM   36  C   UNK     0       6.507   0.862   0.000  0.00  0.00           C+0
HETATM   37  O   UNK     0       6.316   2.390   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3    4   15                                             
CONECT    3    2                                                            
CONECT    4    2    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7    8                                                  
CONECT    7    6                                                            
CONECT    8    6    9   15   33                                             
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12   13   16                                             
CONECT   12   11                                                            
CONECT   13   11   14   15                                                  
CONECT   14   13                                                            
CONECT   15   13    2    8                                                  
CONECT   16   11   17   33   36                                             
CONECT   17   16   18                                                       
CONECT   18   17   19   34                                                  
CONECT   19   18   20                                                       
CONECT   20   19   21   33                                                  
CONECT   21   20   22                                                       
CONECT   22   21   23   31                                                  
CONECT   23   22   24                                                       
CONECT   24   23   25   27                                                  
CONECT   25   24   26                                                       
CONECT   26   25                                                            
CONECT   27   24   28   29                                                  
CONECT   28   27                                                            
CONECT   29   27   30   31                                                  
CONECT   30   29                                                            
CONECT   31   29   22   32                                                  
CONECT   32   31                                                            
CONECT   33   20    8   16                                                  
CONECT   34   18   35   36                                                  
CONECT   35   34                                                            
CONECT   36   34   16   37                                                  
CONECT   37   36                                                            
MASTER        0    0    0    0    0    0    0    0   37    0   84    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₆H₄₀O₁₁

Average Mass

528.5950 Da

Monoisotopic Mass

528.25706 Da

IUPAC Name

12,12-dimethyl-6-methylidene-3-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-17-oxapentacyclo[7.6.2.1⁵,⁸.0¹,¹¹.0²,⁸]octadecane-7,9,10,15-tetrol

Traditional Name

12,12-dimethyl-6-methylidene-3-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-17-oxapentacyclo[7.6.2.1⁵,⁸.0¹,¹¹.0²,⁸]octadecane-7,9,10,15-tetrol

CAS Registry Number

Not Available

SMILES

CC1(C)CCC(O)C23COC(O)(C(O)C12)C12CC(CC(OC4OC(CO)C(O)C(O)C4O)C31)C(=C)C2O

InChI Identifier

InChI=1S/C26H40O11/c1-10-11-6-12(36-22-17(31)16(30)15(29)13(8-27)37-22)18-24-9-35-26(34,25(18,7-11)20(10)32)21(33)19(24)23(2,3)5-4-14(24)28/h11-22,27-34H,1,4-9H2,2-3H3

InChI Key

AEHSHPSACZNIDN-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Isodon parvifolius	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as diterpene glycosides. These are diterpenoids in which an isoprene unit is glycosylated.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Terpene glycosides

Direct Parent

Diterpene glycosides

Alternative Parents

Substituents

Diterpene glycoside
Diterpenoid
Kaurane diterpenoid
Hexose monosaccharide
Glycosyl compound
O-glycosyl compound
Oxane
Monosaccharide
Cyclic alcohol
Hemiacetal
Secondary alcohol
Polyol
Oxacycle
Acetal
Organoheterocyclic compound
Primary alcohol
Organooxygen compound
Alcohol
Hydrocarbon derivative
Organic oxygen compound
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	-1.3	ALOGPS
logP	-2.3	ChemAxon
logS	-1.5	ALOGPS
pKa (Strongest Acidic)	10.68	ChemAxon
pKa (Strongest Basic)	-3	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	11	ChemAxon
Hydrogen Donor Count	8	ChemAxon
Polar Surface Area	189.53 Å²	ChemAxon
Rotatable Bond Count	3	ChemAxon
Refractivity	125.06 m³·mol⁻¹	ChemAxon
Polarizability	53.67 Å³	ChemAxon
Number of Rings	6	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for 12,12-dimethyl-6-methylidene-3-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-17-oxapentacyclo[7.6.2.1⁵,⁸.0¹,¹¹.0²,⁸]octadecane-7,9,10,15-tetrol (NP0330401)

MOL for NP0330401 (12,12-dimethyl-6-methylidene-3-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-17-oxapentacyclo[7.6.2.1⁵,⁸.0¹,¹¹.0²,⁸]octadecane-7,9,10,15-tetrol)

3D MOL for NP0330401 (12,12-dimethyl-6-methylidene-3-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-17-oxapentacyclo[7.6.2.1⁵,⁸.0¹,¹¹.0²,⁸]octadecane-7,9,10,15-tetrol)

3D SDF for NP0330401 (12,12-dimethyl-6-methylidene-3-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-17-oxapentacyclo[7.6.2.1⁵,⁸.0¹,¹¹.0²,⁸]octadecane-7,9,10,15-tetrol)

3D-SDF for NP0330401 (12,12-dimethyl-6-methylidene-3-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-17-oxapentacyclo[7.6.2.1⁵,⁸.0¹,¹¹.0²,⁸]octadecane-7,9,10,15-tetrol)

PDB for NP0330401 (12,12-dimethyl-6-methylidene-3-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-17-oxapentacyclo[7.6.2.1⁵,⁸.0¹,¹¹.0²,⁸]octadecane-7,9,10,15-tetrol)

3D PDB for NP0330401 (12,12-dimethyl-6-methylidene-3-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-17-oxapentacyclo[7.6.2.1⁵,⁸.0¹,¹¹.0²,⁸]octadecane-7,9,10,15-tetrol)

SMILES for NP0330401 (12,12-dimethyl-6-methylidene-3-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-17-oxapentacyclo[7.6.2.1⁵,⁸.0¹,¹¹.0²,⁸]octadecane-7,9,10,15-tetrol)

INCHI for NP0330401 (12,12-dimethyl-6-methylidene-3-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-17-oxapentacyclo[7.6.2.1⁵,⁸.0¹,¹¹.0²,⁸]octadecane-7,9,10,15-tetrol)

Structure for NP0330401 (12,12-dimethyl-6-methylidene-3-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-17-oxapentacyclo[7.6.2.1⁵,⁸.0¹,¹¹.0²,⁸]octadecane-7,9,10,15-tetrol)

3D Structure for NP0330401 (12,12-dimethyl-6-methylidene-3-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-17-oxapentacyclo[7.6.2.1⁵,⁸.0¹,¹¹.0²,⁸]octadecane-7,9,10,15-tetrol)