NP-MRD: Showing NP-Card for (1r,2s,3r,8s,10e,14r,15s)-2,3,8-trihydroxy-1,5,10,14-tetramethyl-7,18-dioxatricyclo[13.2.1.0⁴,⁸]octadeca-4,10-dien-6-one (NP0329996)

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Record Information

Version

1.0

Created at

2022-09-12 14:56:20 UTC

Updated at

2022-09-12 14:56:20 UTC

NP-MRD ID

NP0329996

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(1r,2s,3r,8s,10e,14r,15s)-2,3,8-trihydroxy-1,5,10,14-tetramethyl-7,18-dioxatricyclo[13.2.1.0⁴,⁸]octadeca-4,10-dien-6-one

Description

Pachyclavulariolide L belongs to the class of organic compounds known as macrolides and analogues. These are organic compounds containing a lactone ring of at least twelve members. (1r,2s,3r,8s,10e,14r,15s)-2,3,8-trihydroxy-1,5,10,14-tetramethyl-7,18-dioxatricyclo[13.2.1.0⁴,⁸]octadeca-4,10-dien-6-one is found in Briareum violaceum. It was first documented in 2022 (PMID: 36130824). Based on a literature review a significant number of articles have been published on Pachyclavulariolide L (PMID: 36130802) (PMID: 36130682) (PMID: 36130673) (PMID: 36130775) (PMID: 36130713) (PMID: 36130681).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309122216562D          

 26 28  0  0  1  0            999 V2000
    3.8262   -0.4441    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6494   -1.2500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1974   -1.8666    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0224   -1.8720    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.4302   -2.5892    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.4395   -1.1603    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.0317   -0.4431    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.2645   -1.1656    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    6.9462   -0.7009    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9681   -1.9356    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6088   -2.4554    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.5274   -2.1903    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.7445   -1.9303    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.5220   -3.0153    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    8.1863   -3.5046    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7358   -3.2651    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2459   -4.0235    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4209   -4.0181    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0131   -3.3009    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7689   -2.9703    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1881   -3.2956    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7803   -2.5784    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.2910   -3.2427    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9744   -2.4016    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8935   -1.5806    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1818   -1.1634    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  6  0  0  0
  4  6  1  0  0  0  0
  6  7  1  6  0  0  0
  6  8  1  0  0  0  0
  8  9  1  1  0  0  0
  8 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  6  0  0  0
  8 13  1  0  0  0  0
 12 14  1  0  0  0  0
 14 15  1  6  0  0  0
 14 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  2  0  0  0  0
 19 20  1  0  0  0  0
 19 21  1  0  0  0  0
 21 22  1  0  0  0  0
  3 22  1  0  0  0  0
 22 23  1  1  0  0  0
 22 24  1  0  0  0  0
 24 25  1  0  0  0  0
  2 25  1  0  0  0  0
 25 26  2  0  0  0  0
M  END

     RDKit          3D

 56 58  0  0  0  0  0  0  0  0999 V2000
    4.2984   -1.9589   -0.1471 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6876   -0.6136    0.1548 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4184   -0.2711    0.0310 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2814   -1.1309   -0.4327 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.7470   -2.0522   -1.3556 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6313   -1.8796    0.6958 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.2155   -3.1244    0.9144 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8487   -2.0401    0.3503 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.0938   -3.2959   -0.4514 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7346   -1.9442    1.5480 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0100   -1.3029    0.9970 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5499   -0.7430   -0.3195 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.1986   -0.9657   -0.4268 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7180    0.7829   -0.3673 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.1966    1.1060   -0.3889 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0179    1.2394   -1.6208 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3661    2.5679   -1.5150 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6667    2.8305   -0.2428 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6435    2.9279   -0.0659 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2144    4.0377    0.7780 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6559    2.0000   -0.6493 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2641    1.1138    0.4269 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.3910    1.0922    1.5554 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5333    1.5566    0.7926 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.4270    0.5330    0.6395 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6775    0.6136    0.8892 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.4014   -1.8641   -0.1047 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0035   -2.7134    0.5853 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0636   -2.2831   -1.1817 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5775   -0.4686   -0.9642 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6232   -2.9943   -1.0351 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7587   -1.2928    1.6289 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6418   -3.6635    1.4976 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1787   -3.5344   -0.3966 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8839   -3.0974   -1.5310 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5501   -4.1674   -0.0785 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9929   -2.9768    1.9216 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3365   -1.3672    2.3826 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7349   -2.1143    0.7801 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4241   -0.5502    1.6845 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0532   -1.2062   -1.1931 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2649    1.1643    0.5625 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3693    2.0204   -0.9977 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7109    0.2321   -0.8561 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5865    1.2246    0.6291 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3477    0.4579   -2.0433 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8299    1.3374   -2.4032 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6933    2.6822   -2.4067 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1643    3.3495   -1.6844 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3068    2.9582    0.6430 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2292    3.8466    1.1052 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2311    5.0014    0.2165 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5094    4.2045    1.6282 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5019    2.6078   -1.0637 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2970    1.3601   -1.4437 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9042    0.7678    2.3282 H   0  0  0  0  0  0  0  0  0  0  0  0
 15 14  1  0
 14 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  2  0
 19 20  1  0
 19 21  1  0
 21 22  1  0
 22 23  1  1
 22 24  1  0
 24 25  1  0
 25 26  2  0
 25  2  1  0
  2  1  1  0
  2  3  2  0
  3  4  1  0
  4  5  1  0
  4  6  1  0
  6  7  1  0
  6  8  1  0
  8  9  1  6
  8 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 12 14  1  0
  3 22  1  0
 13  8  1  0
 15 43  1  0
 15 44  1  0
 15 45  1  0
 14 42  1  1
 16 46  1  0
 16 47  1  0
 17 48  1  0
 17 49  1  0
 18 50  1  0
 20 51  1  0
 20 52  1  0
 20 53  1  0
 21 54  1  0
 21 55  1  0
 23 56  1  0
  1 27  1  0
  1 28  1  0
  1 29  1  0
  4 30  1  6
  5 31  1  0
  6 32  1  1
  7 33  1  0
  9 34  1  0
  9 35  1  0
  9 36  1  0
 10 37  1  0
 10 38  1  0
 11 39  1  0
 11 40  1  0
 12 41  1  6
M  END


  Mrv1652309122216562D          

 26 28  0  0  1  0            999 V2000
    3.8262   -0.4441    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6494   -1.2500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1974   -1.8666    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0224   -1.8720    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.4302   -2.5892    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.4395   -1.1603    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.0317   -0.4431    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.2645   -1.1656    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    6.9462   -0.7009    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9681   -1.9356    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6088   -2.4554    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.5274   -2.1903    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.7445   -1.9303    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.5220   -3.0153    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    8.1863   -3.5046    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7358   -3.2651    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2459   -4.0235    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4209   -4.0181    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0131   -3.3009    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7689   -2.9703    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1881   -3.2956    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7803   -2.5784    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.2910   -3.2427    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9744   -2.4016    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8935   -1.5806    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1818   -1.1634    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  6  0  0  0
  4  6  1  0  0  0  0
  6  7  1  6  0  0  0
  6  8  1  0  0  0  0
  8  9  1  1  0  0  0
  8 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  6  0  0  0
  8 13  1  0  0  0  0
 12 14  1  0  0  0  0
 14 15  1  6  0  0  0
 14 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  2  0  0  0  0
 19 20  1  0  0  0  0
 19 21  1  0  0  0  0
 21 22  1  0  0  0  0
  3 22  1  0  0  0  0
 22 23  1  1  0  0  0
 22 24  1  0  0  0  0
 24 25  1  0  0  0  0
  2 25  1  0  0  0  0
 25 26  2  0  0  0  0
M  END
> <DATABASE_ID>
NP0329996

> <DATABASE_NAME>
NP-MRD

> <SMILES>
C[C@@H]1CC\C=C(C)\C[C@]2(O)OC(=O)C(C)=C2[C@@H](O)[C@H](O)[C@@]2(C)CC[C@@H]1O2

> <INCHI_IDENTIFIER>
InChI=1S/C20H30O6/c1-11-6-5-7-12(2)14-8-9-19(4,25-14)17(22)16(21)15-13(3)18(23)26-20(15,24)10-11/h6,12,14,16-17,21-22,24H,5,7-10H2,1-4H3/b11-6+/t12-,14+,16-,17+,19-,20+/m1/s1

> <INCHI_KEY>
SHOBJUPZMGAMDM-KPYZOAPTSA-N

> <FORMULA>
C20H30O6

> <MOLECULAR_WEIGHT>
366.454

> <EXACT_MASS>
366.204238686

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
56

> <JCHEM_AVERAGE_POLARIZABILITY>
38.530324068804994

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1R,2S,3R,8S,10E,14R,15S)-2,3,8-trihydroxy-1,5,10,14-tetramethyl-7,18-dioxatricyclo[13.2.1.0^{4,8}]octadeca-4,10-dien-6-one

> <JCHEM_LOGP>
2.1549872179999996

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
12.861453637363823

> <JCHEM_PKA_STRONGEST_ACIDIC>
11.109987750481617

> <JCHEM_PKA_STRONGEST_BASIC>
-3.5395964102849646

> <JCHEM_POLAR_SURFACE_AREA>
96.22

> <JCHEM_REFRACTIVITY>
96.92009999999999

> <JCHEM_ROTATABLE_BOND_COUNT>
0

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
(1R,2S,3R,8S,10E,14R,15S)-2,3,8-trihydroxy-1,5,10,14-tetramethyl-7,18-dioxatricyclo[13.2.1.0^{4,8}]octadeca-4,10-dien-6-one

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 12-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   12-SEP-22         0                                  
HETATM    1  C   UNK     0       7.142  -0.829   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       6.812  -2.333   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       7.835  -3.484   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       9.375  -3.494   0.000  0.00  0.00           C+0
HETATM    5  O   UNK     0      10.136  -4.833   0.000  0.00  0.00           O+0
HETATM    6  C   UNK     0      10.154  -2.166   0.000  0.00  0.00           C+0
HETATM    7  O   UNK     0       9.393  -0.827   0.000  0.00  0.00           O+0
HETATM    8  C   UNK     0      11.694  -2.176   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      12.966  -1.308   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      11.140  -3.613   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      12.336  -4.583   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      14.051  -4.089   0.000  0.00  0.00           C+0
HETATM   13  O   UNK     0      12.590  -3.603   0.000  0.00  0.00           O+0
HETATM   14  C   UNK     0      14.041  -5.629   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      15.281  -6.542   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      12.573  -6.095   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      11.659  -7.510   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      10.119  -7.500   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       9.358  -6.162   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      10.769  -5.545   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       7.818  -6.152   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       7.056  -4.813   0.000  0.00  0.00           C+0
HETATM   23  O   UNK     0       6.143  -6.053   0.000  0.00  0.00           O+0
HETATM   24  O   UNK     0       5.552  -4.483   0.000  0.00  0.00           O+0
HETATM   25  C   UNK     0       5.401  -2.950   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0       4.073  -2.172   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3   25                                                  
CONECT    3    2    4   22                                                  
CONECT    4    3    5    6                                                  
CONECT    5    4                                                            
CONECT    6    4    7    8                                                  
CONECT    7    6                                                            
CONECT    8    6    9   10   13                                             
CONECT    9    8                                                            
CONECT   10    8   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13   14                                                  
CONECT   13   12    8                                                       
CONECT   14   12   15   16                                                  
CONECT   15   14                                                            
CONECT   16   14   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   19                                                       
CONECT   19   18   20   21                                                  
CONECT   20   19                                                            
CONECT   21   19   22                                                       
CONECT   22   21    3   23   24                                             
CONECT   23   22                                                            
CONECT   24   22   25                                                       
CONECT   25   24    2   26                                                  
CONECT   26   25                                                            
MASTER        0    0    0    0    0    0    0    0   26    0   56    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₀H₃₀O₆

Average Mass

366.4540 Da

Monoisotopic Mass

366.20424 Da

IUPAC Name

Not Available

Traditional Name

Not Available

CAS Registry Number

Not Available

SMILES

C[C@@H]1CC\C=C(C)\C[C@]2(O)OC(=O)C(C)=C2[C@@H](O)[C@H](O)[C@@]2(C)CC[C@@H]1O2

InChI Identifier

InChI=1S/C20H30O6/c1-11-6-5-7-12(2)14-8-9-19(4,25-14)17(22)16(21)15-13(3)18(23)26-20(15,24)10-11/h6,12,14,16-17,21-22,24H,5,7-10H2,1-4H3/b11-6+/t12-,14+,16-,17+,19-,20+/m1/s1

InChI Key

SHOBJUPZMGAMDM-KPYZOAPTSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Briareum violaceum	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as macrolides and analogues. These are organic compounds containing a lactone ring of at least twelve members.

Kingdom

Organic compounds

Super Class

Phenylpropanoids and polyketides

Class

Macrolides and analogues

Sub Class

Not Available

Direct Parent

Macrolides and analogues

Alternative Parents

Substituents

Macrolide
2-furanone
Dihydrofuran
Oxolane
Enoate ester
Alpha,beta-unsaturated carboxylic ester
Carboxylic acid ester
Secondary alcohol
1,2-diol
Hemiacetal
Lactone
Oxacycle
Organoheterocyclic compound
Carboxylic acid derivative
Dialkyl ether
Polyol
Ether
Monocarboxylic acid or derivatives
Organic oxygen compound
Carbonyl group
Hydrocarbon derivative
Alcohol
Organooxygen compound
Organic oxide
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

101138868

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Ahmad A, Ghufran R: Microbial granules on reactors performance during organic butyrate digestion: clean production. Crit Rev Biotechnol. 2022 Sep 21:1-21. doi: 10.1080/07388551.2022.2103641. [PubMed:36130802 ]
Santos Correa KC, Moreira AC, Abd El-Raheem Ibrahim AG, Ramos de Jesus HC, Micocci KC, Crizostomo Kock FV, Bueno OC, Venancio T, Henrique-Silva F, Souza DHF: Identification and characterization of a recombinant cysteine peptidase (AsCathL) from leaf-cutting ant Atta sexdens Linnaeus, 1758 (Hymenoptera, Formicidae). Protein Expr Purif. 2022 Sep 18;201:106174. doi: 10.1016/j.pep.2022.106174. [PubMed:36130682 ]
Jiang C, Liu F, Yang H, Yang M, Li Z, Han T, Li D, Hua H: Flavonolignans and biflavonoids from Cephalotaxus oliveri exert neuroprotective effect via Nrf2/ARE pathway. Phytochemistry. 2022 Sep 18;204:113436. doi: 10.1016/j.phytochem.2022.113436. [PubMed:36130673 ]
Abid MA, Ahmed S, Muneer S, Khan S, de Oliveira MHS, Kausar R, Siddiqui I: Evaluation of CSF kappa free light chains for the diagnosis of multiple sclerosis (MS): a comparison with oligoclonal bands (OCB) detection via isoelectric focusing (IEF) coupled with immunoblotting. J Clin Pathol. 2022 Sep 21. pii: jcp-2022-208354. doi: 10.1136/jcp-2022-208354. [PubMed:36130824 ]
Wagnew F, Alene KA, Eshetie S, Wingfield T, Kelly M, Gray D: Effects of zinc and vitamin A supplementation on prognostic markers and treatment outcomes of adults with pulmonary tuberculosis: a systematic review and meta-analysis. BMJ Glob Health. 2022 Sep;7(9). pii: bmjgh-2022-008625. doi: 10.1136/bmjgh-2022-008625. [PubMed:36130775 ]
Li J, Yue L, Zhao Q, Cao X, Tang W, Chen F, Wang C, Wang Z: Prediction models on biomass and yield of rice affected by metal (oxide) nanoparticles using nano-specific descriptors. NanoImpact. 2022 Sep 18;28:100429. doi: 10.1016/j.impact.2022.100429. [PubMed:36130713 ]
Wang LG, Omar C, Litster J, Slade D, Li J, Salman A, Bellinghausen S, Barrasso D, Mitchell N: Model driven design for integrated twin screw granulator and fluid bed dryer via flowsheet modelling. Int J Pharm. 2022 Sep 18;628:122186. doi: 10.1016/j.ijpharm.2022.122186. [PubMed:36130681 ]
Thakkar SV, Rodrigues D, Zhai B, Banton D, Somani S, Javidi A, Mahan A, Ember S, DeGrazio D, Ganguly S, Amin K, Nanda H: Residue-Specific Impact of EDTA and Methionine on Protein Oxidation in Biotherapeutics Formulations Using an Integrated Biotherapeutics Drug Product Development Workflow. J Pharm Sci. 2022 Sep 18. pii: S0022-3549(22)00411-7. doi: 10.1016/j.xphs.2022.09.011. [PubMed:36130676 ]
Chi H, Xia B, Shen J, Zhu X, Lu Z, Lu F, Zhu P: Characterization of a novel and glutaminase-free type II L-asparaginase from Corynebacterium glutamicum and its acrylamide alleviation efficiency in potato chips. Int J Biol Macromol. 2022 Nov 30;221:1384-1393. doi: 10.1016/j.ijbiomac.2022.09.162. Epub 2022 Sep 18. [PubMed:36130640 ]
Wang P, Kong X, Ma L, Wang S, Zhang W, Song L, Li H, Wang Y, Han Z: Metal(loid)s removal by zeolite-supported iron particles from mine contaminated groundwater: Performance and mechanistic insights. Environ Pollut. 2022 Nov 15;313:120155. doi: 10.1016/j.envpol.2022.120155. Epub 2022 Sep 18. [PubMed:36130632 ]
LOTUS database [Link]

Showing NP-Card for (1r,2s,3r,8s,10e,14r,15s)-2,3,8-trihydroxy-1,5,10,14-tetramethyl-7,18-dioxatricyclo[13.2.1.0⁴,⁸]octadeca-4,10-dien-6-one (NP0329996)

MOL for NP0329996 ((1r,2s,3r,8s,10e,14r,15s)-2,3,8-trihydroxy-1,5,10,14-tetramethyl-7,18-dioxatricyclo[13.2.1.0⁴,⁸]octadeca-4,10-dien-6-one)

3D MOL for NP0329996 ((1r,2s,3r,8s,10e,14r,15s)-2,3,8-trihydroxy-1,5,10,14-tetramethyl-7,18-dioxatricyclo[13.2.1.0⁴,⁸]octadeca-4,10-dien-6-one)

3D SDF for NP0329996 ((1r,2s,3r,8s,10e,14r,15s)-2,3,8-trihydroxy-1,5,10,14-tetramethyl-7,18-dioxatricyclo[13.2.1.0⁴,⁸]octadeca-4,10-dien-6-one)

3D-SDF for NP0329996 ((1r,2s,3r,8s,10e,14r,15s)-2,3,8-trihydroxy-1,5,10,14-tetramethyl-7,18-dioxatricyclo[13.2.1.0⁴,⁸]octadeca-4,10-dien-6-one)

PDB for NP0329996 ((1r,2s,3r,8s,10e,14r,15s)-2,3,8-trihydroxy-1,5,10,14-tetramethyl-7,18-dioxatricyclo[13.2.1.0⁴,⁸]octadeca-4,10-dien-6-one)

3D PDB for NP0329996 ((1r,2s,3r,8s,10e,14r,15s)-2,3,8-trihydroxy-1,5,10,14-tetramethyl-7,18-dioxatricyclo[13.2.1.0⁴,⁸]octadeca-4,10-dien-6-one)

SMILES for NP0329996 ((1r,2s,3r,8s,10e,14r,15s)-2,3,8-trihydroxy-1,5,10,14-tetramethyl-7,18-dioxatricyclo[13.2.1.0⁴,⁸]octadeca-4,10-dien-6-one)

INCHI for NP0329996 ((1r,2s,3r,8s,10e,14r,15s)-2,3,8-trihydroxy-1,5,10,14-tetramethyl-7,18-dioxatricyclo[13.2.1.0⁴,⁸]octadeca-4,10-dien-6-one)

Structure for NP0329996 ((1r,2s,3r,8s,10e,14r,15s)-2,3,8-trihydroxy-1,5,10,14-tetramethyl-7,18-dioxatricyclo[13.2.1.0⁴,⁸]octadeca-4,10-dien-6-one)

3D Structure for NP0329996 ((1r,2s,3r,8s,10e,14r,15s)-2,3,8-trihydroxy-1,5,10,14-tetramethyl-7,18-dioxatricyclo[13.2.1.0⁴,⁸]octadeca-4,10-dien-6-one)