NP-MRD: Showing NP-Card for 4,5,6,9,10-pentamethoxy-18-methyl-17-oxatetracyclo[13.2.1.0²,⁷.0⁸,¹³]octadeca-2(7),3,5,8(13),9,11-hexaen-11-ol (NP0329549)

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Record Information

Version

2.0

Created at

2022-09-12 14:02:37 UTC

Updated at

2022-09-12 14:02:37 UTC

NP-MRD ID

NP0329549

Secondary Accession Numbers

None

Natural Product Identification

Common Name

4,5,6,9,10-pentamethoxy-18-methyl-17-oxatetracyclo[13.2.1.0²,⁷.0⁸,¹³]octadeca-2(7),3,5,8(13),9,11-hexaen-11-ol

Description

4,5,6,9,10-Pentamethoxy-18-methyl-17-oxatetracyclo[13.2.1.0²,⁷.0⁸,¹³]Octadeca-2,4,6,8,10,12-hexaen-11-ol belongs to the class of organic compounds known as hydrolyzable tannins. These are tannins with a structure characterized by either of the following models. In model 1, the structure contains galloyl units (in some cases, shikimic acid units) that are linked to diverse polyol carbohydrate-, catechin-, or triterpenoid units. In model 2, contains at least two galloyl units C-C coupled to each other, and do not contain a glycosidically linked catechin unit. 4,5,6,9,10-pentamethoxy-18-methyl-17-oxatetracyclo[13.2.1.0²,⁷.0⁸,¹³]octadeca-2(7),3,5,8(13),9,11-hexaen-11-ol is found in Magnolia pyramidata. 4,5,6,9,10-Pentamethoxy-18-methyl-17-oxatetracyclo[13.2.1.0²,⁷.0⁸,¹³]Octadeca-2,4,6,8,10,12-hexaen-11-ol is an extremely weak basic (essentially neutral) compound (based on its pKa).

Structure

MOL SDF PDB SMILES InChI


  Mrv1533004241506152D          

 30 33  0  0  0  0            999 V2000
    1.5344    3.5830    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3072    3.2100    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7357    2.4407    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1387    1.8713    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3333    1.0696    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5775    0.7387    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2113   -0.0005    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4059   -0.8023    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0703   -1.2913    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8936   -1.2389    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4906   -0.6695    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1550   -1.1586    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9108   -0.8277    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4748   -1.4820    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0021   -0.0078    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9115   -0.0653    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.6677   -0.4763    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3377    0.4813    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0735    1.2158    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.9194    1.5204    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5820    0.1504    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1249    0.8372    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7219    1.4066    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5384    1.4182    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.8892    0.6000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5273    2.2083    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9089    3.0221    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.9158    3.8865    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5702   -0.3379    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6631   -0.5634    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 13 15  2  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 15 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 18 21  2  0  0  0  0
 11 21  1  0  0  0  0
 21 22  1  0  0  0  0
  5 22  2  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 23 26  2  0  0  0  0
  3 26  1  0  0  0  0
 26 27  1  0  0  0  0
 27 28  1  0  0  0  0
  9 29  1  0  0  0  0
  6 29  1  0  0  0  0
 29 30  1  0  0  0  0
M  END


  Mrv1533004241506152D          

 30 33  0  0  0  0            999 V2000
    1.5344    3.5830    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3072    3.2100    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7357    2.4407    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1387    1.8713    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3333    1.0696    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5775    0.7387    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2113   -0.0005    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4059   -0.8023    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0703   -1.2913    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8936   -1.2389    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4906   -0.6695    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1550   -1.1586    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9108   -0.8277    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4748   -1.4820    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0021   -0.0078    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9115   -0.0653    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.6677   -0.4763    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3377    0.4813    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0735    1.2158    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.9194    1.5204    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5820    0.1504    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1249    0.8372    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7219    1.4066    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5384    1.4182    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.8892    0.6000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5273    2.2083    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9089    3.0221    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.9158    3.8865    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5702   -0.3379    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6631   -0.5634    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 13 15  2  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 15 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 18 21  2  0  0  0  0
 11 21  1  0  0  0  0
 21 22  1  0  0  0  0
  5 22  2  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 23 26  2  0  0  0  0
  3 26  1  0  0  0  0
 26 27  1  0  0  0  0
 27 28  1  0  0  0  0
  9 29  1  0  0  0  0
  6 29  1  0  0  0  0
 29 30  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0329549

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC1=CC2=C(C(OC)=C1OC)C1=C(OC)C(OC)=C(O)C=C1CC1COC2C1C

> <INCHI_IDENTIFIER>
InChI=1S/C23H28O7/c1-11-13-7-12-8-15(24)20(26-3)22(28-5)17(12)18-14(19(11)30-10-13)9-16(25-2)21(27-4)23(18)29-6/h8-9,11,13,19,24H,7,10H2,1-6H3

> <INCHI_KEY>
XJUOGJHZZOCIGO-UHFFFAOYSA-N

> <FORMULA>
C23H28O7

> <MOLECULAR_WEIGHT>
416.47

> <EXACT_MASS>
416.183503242

> <JCHEM_ACCEPTOR_COUNT>
7

> <JCHEM_ATOM_COUNT>
58

> <JCHEM_AVERAGE_POLARIZABILITY>
43.65718540171199

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
4,5,6,9,10-pentamethoxy-18-methyl-17-oxatetracyclo[13.2.1.0²,⁷.0⁸,¹³]octadeca-2(7),3,5,8,10,12-hexaen-11-ol

> <ALOGPS_LOGP>
3.06

> <JCHEM_LOGP>
3.204963275333333

> <ALOGPS_LOGS>
-4.50

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
9.940012613979896

> <JCHEM_PKA_STRONGEST_BASIC>
-3.9072279818165065

> <JCHEM_POLAR_SURFACE_AREA>
75.61000000000001

> <JCHEM_REFRACTIVITY>
111.85059999999997

> <JCHEM_ROTATABLE_BOND_COUNT>
5

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.33e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
4,5,6,9,10-pentamethoxy-18-methyl-17-oxatetracyclo[13.2.1.0²,⁷.0⁸,¹³]octadeca-2(7),3,5,8,10,12-hexaen-11-ol

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 24-APR-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-APR-15         0                                  
HETATM    1  C   UNK     0       2.864   6.688   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0       4.307   5.992   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0       5.107   4.556   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       3.992   3.493   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       4.355   1.996   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       2.945   1.379   0.000  0.00  0.00           C+0
HETATM    7  O   UNK     0       2.261  -0.001   0.000  0.00  0.00           O+0
HETATM    8  C   UNK     0       2.624  -1.498   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       3.865  -2.410   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       5.401  -2.313   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       6.516  -1.250   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       7.756  -2.163   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       9.167  -1.545   0.000  0.00  0.00           C+0
HETATM   14  O   UNK     0      10.220  -2.766   0.000  0.00  0.00           O+0
HETATM   15  C   UNK     0       9.337  -0.015   0.000  0.00  0.00           C+0
HETATM   16  O   UNK     0      11.035  -0.122   0.000  0.00  0.00           O+0
HETATM   17  C   UNK     0      12.446  -0.889   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       8.097   0.898   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0       9.470   2.270   0.000  0.00  0.00           O+0
HETATM   20  C   UNK     0      11.049   2.838   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       6.686   0.281   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       5.833   1.563   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       6.948   2.626   0.000  0.00  0.00           C+0
HETATM   24  O   UNK     0       8.472   2.647   0.000  0.00  0.00           O+0
HETATM   25  C   UNK     0       9.127   1.120   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       6.584   4.122   0.000  0.00  0.00           C+0
HETATM   27  O   UNK     0       7.297   5.641   0.000  0.00  0.00           O+0
HETATM   28  C   UNK     0       7.309   7.255   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       2.931  -0.631   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0       1.238  -1.052   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4   26                                                  
CONECT    4    3    5                                                       
CONECT    5    4    6   22                                                  
CONECT    6    5    7   29                                                  
CONECT    7    6    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10   29                                                  
CONECT   10    9   11                                                       
CONECT   11   10   12   21                                                  
CONECT   12   11   13                                                       
CONECT   13   12   14   15                                                  
CONECT   14   13                                                            
CONECT   15   13   16   18                                                  
CONECT   16   15   17                                                       
CONECT   17   16                                                            
CONECT   18   15   19   21                                                  
CONECT   19   18   20                                                       
CONECT   20   19                                                            
CONECT   21   18   11   22                                                  
CONECT   22   21    5   23                                                  
CONECT   23   22   24   26                                                  
CONECT   24   23   25                                                       
CONECT   25   24                                                            
CONECT   26   23    3   27                                                  
CONECT   27   26   28                                                       
CONECT   28   27                                                            
CONECT   29    9    6   30                                                  
CONECT   30   29                                                            
MASTER        0    0    0    0    0    0    0    0   30    0   66    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₃H₂₈O₇

Average Mass

416.4700 Da

Monoisotopic Mass

416.18350 Da

IUPAC Name

4,5,6,9,10-pentamethoxy-18-methyl-17-oxatetracyclo[13.2.1.0²,⁷.0⁸,¹³]octadeca-2(7),3,5,8,10,12-hexaen-11-ol

Traditional Name

4,5,6,9,10-pentamethoxy-18-methyl-17-oxatetracyclo[13.2.1.0²,⁷.0⁸,¹³]octadeca-2(7),3,5,8,10,12-hexaen-11-ol

CAS Registry Number

Not Available

SMILES

COC1=CC2=C(C(OC)=C1OC)C1=C(OC)C(OC)=C(O)C=C1CC1COC2C1C

InChI Identifier

InChI=1S/C23H28O7/c1-11-13-7-12-8-15(24)20(26-3)22(28-5)17(12)18-14(19(11)30-10-13)9-16(25-2)21(27-4)23(18)29-6/h8-9,11,13,19,24H,7,10H2,1-6H3

InChI Key

XJUOGJHZZOCIGO-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Not Available

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Magnolia pyramidata	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as hydrolyzable tannins. These are tannins with a structure characterized by either of the following models. In model 1, the structure contains galloyl units (in some cases, shikimic acid units) that are linked to diverse polyol carbohydrate-, catechin-, or triterpenoid units. In model 2, contains at least two galloyl units C-C coupled to each other, and do not contain a glycosidically linked catechin unit.

Kingdom

Organic compounds

Super Class

Phenylpropanoids and polyketides

Class

Tannins

Sub Class

Hydrolyzable tannins

Direct Parent

Hydrolyzable tannins

Alternative Parents

Substituents

Hydrolyzable tannin
Dibenzocyclooctane lignan
Anisole
1-hydroxy-2-unsubstituted benzenoid
Alkyl aryl ether
Benzenoid
Tetrahydrofuran
Oxacycle
Organoheterocyclic compound
Ether
Dialkyl ether
Organic oxygen compound
Hydrocarbon derivative
Organooxygen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.06	ALOGPS
logP	3.2	ChemAxon
logS	-4.5	ALOGPS
pKa (Strongest Acidic)	9.94	ChemAxon
pKa (Strongest Basic)	-3.9	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	7	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	75.61 Å²	ChemAxon
Rotatable Bond Count	5	ChemAxon
Refractivity	111.85 m³·mol⁻¹	ChemAxon
Polarizability	43.66 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for 4,5,6,9,10-pentamethoxy-18-methyl-17-oxatetracyclo[13.2.1.0²,⁷.0⁸,¹³]octadeca-2(7),3,5,8(13),9,11-hexaen-11-ol (NP0329549)

MOL for NP0329549 (4,5,6,9,10-pentamethoxy-18-methyl-17-oxatetracyclo[13.2.1.0²,⁷.0⁸,¹³]octadeca-2(7),3,5,8(13),9,11-hexaen-11-ol)

3D MOL for NP0329549 (4,5,6,9,10-pentamethoxy-18-methyl-17-oxatetracyclo[13.2.1.0²,⁷.0⁸,¹³]octadeca-2(7),3,5,8(13),9,11-hexaen-11-ol)

3D SDF for NP0329549 (4,5,6,9,10-pentamethoxy-18-methyl-17-oxatetracyclo[13.2.1.0²,⁷.0⁸,¹³]octadeca-2(7),3,5,8(13),9,11-hexaen-11-ol)

3D-SDF for NP0329549 (4,5,6,9,10-pentamethoxy-18-methyl-17-oxatetracyclo[13.2.1.0²,⁷.0⁸,¹³]octadeca-2(7),3,5,8(13),9,11-hexaen-11-ol)

PDB for NP0329549 (4,5,6,9,10-pentamethoxy-18-methyl-17-oxatetracyclo[13.2.1.0²,⁷.0⁸,¹³]octadeca-2(7),3,5,8(13),9,11-hexaen-11-ol)

3D PDB for NP0329549 (4,5,6,9,10-pentamethoxy-18-methyl-17-oxatetracyclo[13.2.1.0²,⁷.0⁸,¹³]octadeca-2(7),3,5,8(13),9,11-hexaen-11-ol)

SMILES for NP0329549 (4,5,6,9,10-pentamethoxy-18-methyl-17-oxatetracyclo[13.2.1.0²,⁷.0⁸,¹³]octadeca-2(7),3,5,8(13),9,11-hexaen-11-ol)

INCHI for NP0329549 (4,5,6,9,10-pentamethoxy-18-methyl-17-oxatetracyclo[13.2.1.0²,⁷.0⁸,¹³]octadeca-2(7),3,5,8(13),9,11-hexaen-11-ol)

Structure for NP0329549 (4,5,6,9,10-pentamethoxy-18-methyl-17-oxatetracyclo[13.2.1.0²,⁷.0⁸,¹³]octadeca-2(7),3,5,8(13),9,11-hexaen-11-ol)

3D Structure for NP0329549 (4,5,6,9,10-pentamethoxy-18-methyl-17-oxatetracyclo[13.2.1.0²,⁷.0⁸,¹³]octadeca-2(7),3,5,8(13),9,11-hexaen-11-ol)