Np mrd loader

Record Information
Version2.0
Created at2022-09-12 11:57:19 UTC
Updated at2022-09-12 11:57:19 UTC
NP-MRD IDNP0328463
Secondary Accession NumbersNone
Natural Product Identification
Common Namemethyl (2r)-2-[(3r,6s)-6-[(3e)-6-[(1r)-1-hydroxy-2,2-dimethyl-6-methylidenecyclohexyl]-4-methylhex-3-en-1-yl]-6-methyl-1,2-dioxan-3-yl]propanoate
DescriptionMethyl (2R)-2-[(3R,6S)-6-[(3E)-6-[(1R)-1-hydroxy-2,2-dimethyl-6-methylidenecyclohexyl]-4-methylhex-3-en-1-yl]-6-methyl-1,2-dioxan-3-yl]propanoate belongs to the class of organic compounds known as sesquiterpenoids. These are terpenes with three consecutive isoprene units. methyl (2r)-2-[(3r,6s)-6-[(3e)-6-[(1r)-1-hydroxy-2,2-dimethyl-6-methylidenecyclohexyl]-4-methylhex-3-en-1-yl]-6-methyl-1,2-dioxan-3-yl]propanoate is found in Diacarnus megaspinorhabdosa. Based on a literature review very few articles have been published on methyl (2R)-2-[(3R,6S)-6-[(3E)-6-[(1R)-1-hydroxy-2,2-dimethyl-6-methylidenecyclohexyl]-4-methylhex-3-en-1-yl]-6-methyl-1,2-dioxan-3-yl]propanoate.
Structure
Thumb
Synonyms
ValueSource
Methyl (2R)-2-[(3R,6S)-6-[(3E)-6-[(1R)-1-hydroxy-2,2-dimethyl-6-methylidenecyclohexyl]-4-methylhex-3-en-1-yl]-6-methyl-1,2-dioxan-3-yl]propanoic acidGenerator
Chemical FormulaC25H42O5
Average Mass422.6060 Da
Monoisotopic Mass422.30322 Da
IUPAC Namemethyl (2R)-2-[(3R,6S)-6-[(3E)-6-[(1R)-1-hydroxy-2,2-dimethyl-6-methylidenecyclohexyl]-4-methylhex-3-en-1-yl]-6-methyl-1,2-dioxan-3-yl]propanoate
Traditional Namemethyl (2R)-2-[(3R,6S)-6-[(3E)-6-[(1R)-1-hydroxy-2,2-dimethyl-6-methylidenecyclohexyl]-4-methylhex-3-en-1-yl]-6-methyl-1,2-dioxan-3-yl]propanoate
CAS Registry NumberNot Available
SMILES
COC(=O)[C@H](C)[C@H]1CC[C@](C)(CC\C=C(/C)CC[C@]2(O)C(=C)CCCC2(C)C)OO1
InChI Identifier
InChI=1S/C25H42O5/c1-18(12-17-25(27)19(2)11-9-14-23(25,4)5)10-8-15-24(6)16-13-21(29-30-24)20(3)22(26)28-7/h10,20-21,27H,2,8-9,11-17H2,1,3-7H3/b18-10+/t20-,21-,24+,25+/m1/s1
InChI KeyRZBOFZRCMWQHOO-HULIUYFXSA-N
Experimental Spectra
Not Available
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Diacarnus megaspinorhabdosaLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as sesquiterpenoids. These are terpenes with three consecutive isoprene units.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassSesquiterpenoids
Direct ParentSesquiterpenoids
Alternative Parents
Substituents
  • Sesquiterpenoid
  • Cyclofarsesane sesquiterpenoid
  • Ortho-dioxane
  • Cyclic alcohol
  • Methyl ester
  • Tertiary alcohol
  • Carboxylic acid ester
  • Dialkyl peroxide
  • Carboxylic acid derivative
  • Monocarboxylic acid or derivatives
  • Oxacycle
  • Organoheterocyclic compound
  • Hydrocarbon derivative
  • Organic oxide
  • Organic oxygen compound
  • Alcohol
  • Organooxygen compound
  • Carbonyl group
  • Aliphatic heteromonocyclic compound
Molecular FrameworkAliphatic heteromonocyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP5.63ChemAxon
pKa (Strongest Basic)-0.26ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area64.99 ŲChemAxon
Rotatable Bond Count9ChemAxon
Refractivity119.29 m³·mol⁻¹ChemAxon
Polarizability49.18 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound162945315
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. LOTUS database [Link]