NP-MRD: Showing NP-Card for 1-hydroxy-2-(hydroxymethyl)-11-methyl-9-(2-methylbutoxy)-7-methylidene-5,14-dioxatricyclo[9.2.1.0⁴,⁸]tetradec-2-en-6-one (NP0328407)

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Record Information

Version

1.0

Created at

2022-09-12 11:51:17 UTC

Updated at

2022-09-12 11:51:17 UTC

NP-MRD ID

NP0328407

Secondary Accession Numbers

None

Natural Product Identification

Common Name

1-hydroxy-2-(hydroxymethyl)-11-methyl-9-(2-methylbutoxy)-7-methylidene-5,14-dioxatricyclo[9.2.1.0⁴,⁸]tetradec-2-en-6-one

Description

1-Hydroxy-2-(hydroxymethyl)-11-methyl-9-(2-methylbutoxy)-7-methylidene-5,14-dioxatricyclo[9.2.1.0⁴,⁸]Tetradec-2-en-6-one belongs to the class of organic compounds known as terpene lactones. These are prenol lipids containing a lactone ring. 1-Hydroxy-2-(hydroxymethyl)-11-methyl-9-(2-methylbutoxy)-7-methylidene-5,14-dioxatricyclo[9.2.1.0⁴,⁸]Tetradec-2-en-6-one is an extremely weak basic (essentially neutral) compound (based on its pKa).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1533004251506052D          

 26 28  0  0  0  0            999 V2000
   -3.1697   -1.3168    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4552   -1.7293    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7408   -1.3168    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7408   -0.4918    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0263   -1.7293    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3118   -1.3168    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4026   -1.7293    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2311   -2.5363    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5667   -3.2900    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0464   -3.8420    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2811   -3.7025    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1016   -3.6163    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7147   -3.0642    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4292   -3.4767    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.6125   -2.9086    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8862   -2.2573    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5507   -1.5036    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8362   -1.0911    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0077   -0.2841    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2933    0.1284    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2070    0.9489    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6802   -0.4236    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1268   -0.2521    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0157   -1.1773    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7067   -2.1710    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0423   -1.4173    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  3  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
  9 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 13 15  1  0  0  0  0
  9 15  1  0  0  0  0
 13 16  1  0  0  0  0
 16 17  2  0  0  0  0
 17 18  1  4  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  2  0  0  0  0
 20 22  1  0  0  0  0
 22 23  2  0  0  0  0
 22 24  1  0  0  0  0
  7 24  1  0  0  0  0
 18 24  1  0  0  0  0
 16 25  1  0  0  0  0
 25 26  1  0  0  0  0
M  END

     RDKit          3D

 56 58  0  0  0  0  0  0  0  0999 V2000
    0.2026   -3.4909    0.8176 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5132   -2.8411   -0.0821 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0450   -3.4859   -1.2733 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6600   -4.4970   -1.8923 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1442   -2.7176   -1.6296 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8783   -1.3539   -1.2376 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.1896   -0.7294   -1.0147 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5797    0.0743   -0.0465 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8839   -0.1869    0.6167 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5949   -1.2544    0.1691 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8400    1.2565    0.4589 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.5418    1.8498    1.5111 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7112    2.3313   -0.5995 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3328    2.8922   -0.3372 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6373    1.7061    0.3088 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.3780    2.2730    1.2589 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0584    0.8498   -0.7857 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2966   -0.5424   -0.3055 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.0660   -0.4001    0.8072 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.3487   -0.7971    0.8128 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3090   -0.1635   -0.1481 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.5585    1.3076    0.1154 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6563   -0.8629    0.1278 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7326   -0.3466   -0.7638 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9396   -1.4130   -0.1120 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.5899    0.9876    0.9646 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4527   -4.5255    0.7575 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5537   -2.9255    1.6688 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3653   -0.9468   -2.1495 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9340   -0.9965   -1.7999 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7345   -0.3202    1.7194 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5175    0.7402    0.5445 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3311   -2.1325    0.4886 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2983    2.3990    1.1727 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4718    3.1092   -0.5306 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7747    1.8493   -1.5933 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8548    3.1324   -1.2921 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3541    3.7477    0.3379 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1589    2.8166    0.7104 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1404    3.0725    1.8694 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7491    1.5571    2.0184 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8003    0.8694   -1.6069 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8294    1.3761   -1.1880 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8295   -1.0193   -1.1645 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5509   -1.8891    0.7854 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7538   -0.5048    1.8365 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1112   -0.2971   -1.2022 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0992    1.8908   -0.7042 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6417    1.5544    0.0746 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1911    1.6163    1.0904 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5401   -1.9546    0.1014 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9216   -0.5908    1.1796 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.3307    0.4615   -0.2878 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4680   -1.1896   -0.9166 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3868   -0.0809   -1.7795 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4001   -1.2649    0.8917 H   0  0  0  0  0  0  0  0  0  0  0  0
 24 23  1  0
 23 21  1  0
 21 22  1  0
 21 20  1  0
 20 19  1  0
 19 18  1  0
 18 17  1  0
 17 15  1  0
 15 16  1  1
 15 14  1  0
 14 13  1  0
 13 11  1  0
 11 12  1  1
 11 26  1  0
 11  8  1  0
  8  9  1  0
  9 10  1  0
  8  7  2  0
  7  6  1  0
  6  5  1  0
  5  3  1  0
  3  4  2  0
  3  2  1  0
  2  1  2  3
  2 25  1  0
 25 18  1  0
 26 15  1  0
 25  6  1  0
 24 53  1  0
 24 54  1  0
 24 55  1  0
 23 51  1  0
 23 52  1  0
 21 47  1  6
 22 48  1  0
 22 49  1  0
 22 50  1  0
 20 45  1  0
 20 46  1  0
 18 44  1  6
 17 42  1  0
 17 43  1  0
 16 39  1  0
 16 40  1  0
 16 41  1  0
 14 37  1  0
 14 38  1  0
 13 35  1  0
 13 36  1  0
 12 34  1  0
  9 31  1  0
  9 32  1  0
 10 33  1  0
  7 30  1  0
  6 29  1  6
  1 27  1  0
  1 28  1  0
 25 56  1  1
M  END


  Mrv1533004251506052D          

 26 28  0  0  0  0            999 V2000
   -3.1697   -1.3168    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4552   -1.7293    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7408   -1.3168    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7408   -0.4918    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0263   -1.7293    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3118   -1.3168    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4026   -1.7293    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2311   -2.5363    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5667   -3.2900    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0464   -3.8420    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2811   -3.7025    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1016   -3.6163    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7147   -3.0642    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4292   -3.4767    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.6125   -2.9086    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8862   -2.2573    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5507   -1.5036    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8362   -1.0911    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0077   -0.2841    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2933    0.1284    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2070    0.9489    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6802   -0.4236    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1268   -0.2521    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0157   -1.1773    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7067   -2.1710    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0423   -1.4173    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  3  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
  9 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 13 15  1  0  0  0  0
  9 15  1  0  0  0  0
 13 16  1  0  0  0  0
 16 17  2  0  0  0  0
 17 18  1  4  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  2  0  0  0  0
 20 22  1  0  0  0  0
 22 23  2  0  0  0  0
 22 24  1  0  0  0  0
  7 24  1  0  0  0  0
 18 24  1  0  0  0  0
 16 25  1  0  0  0  0
 25 26  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0328407

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CCC(C)COC1CC2(C)CCC(O)(O2)C(CO)=CC2OC(=O)C(=C)C12

> <INCHI_IDENTIFIER>
InChI=1S/C20H30O6/c1-5-12(2)11-24-16-9-19(4)6-7-20(23,26-19)14(10-21)8-15-17(16)13(3)18(22)25-15/h8,12,15-17,21,23H,3,5-7,9-11H2,1-2,4H3

> <INCHI_KEY>
PCHLUXXZPOQAHL-UHFFFAOYSA-N

> <FORMULA>
C20H30O6

> <MOLECULAR_WEIGHT>
366.454

> <EXACT_MASS>
366.204238686

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
56

> <JCHEM_AVERAGE_POLARIZABILITY>
39.180412659674175

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
1-hydroxy-2-(hydroxymethyl)-11-methyl-9-(2-methylbutoxy)-7-methylidene-5,14-dioxatricyclo[9.2.1.0⁴,⁸]tetradec-2-en-6-one

> <ALOGPS_LOGP>
1.98

> <JCHEM_LOGP>
1.9743635526666656

> <ALOGPS_LOGS>
-2.89

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
15.091817853046447

> <JCHEM_PKA_STRONGEST_ACIDIC>
11.414042811844656

> <JCHEM_PKA_STRONGEST_BASIC>
-2.799980235274762

> <JCHEM_POLAR_SURFACE_AREA>
85.22000000000001

> <JCHEM_REFRACTIVITY>
96.83679999999998

> <JCHEM_ROTATABLE_BOND_COUNT>
5

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
4.74e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
1-hydroxy-2-(hydroxymethyl)-11-methyl-9-(2-methylbutoxy)-7-methylidene-5,14-dioxatricyclo[9.2.1.0⁴,⁸]tetradec-2-en-6-one

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 25-APR-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   25-APR-15         0                                  
HETATM    1  C   UNK     0      -5.917  -2.458   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -4.583  -3.228   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -3.249  -2.458   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -3.249  -0.918   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      -1.916  -3.228   0.000  0.00  0.00           C+0
HETATM    6  O   UNK     0      -0.582  -2.458   0.000  0.00  0.00           O+0
HETATM    7  C   UNK     0       0.752  -3.228   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       0.431  -4.734   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       1.058  -6.141   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      -0.087  -7.172   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       2.391  -6.911   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       3.923  -6.750   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       5.067  -5.720   0.000  0.00  0.00           C+0
HETATM   14  O   UNK     0       6.401  -6.490   0.000  0.00  0.00           O+0
HETATM   15  O   UNK     0       3.010  -5.429   0.000  0.00  0.00           O+0
HETATM   16  C   UNK     0       5.388  -4.214   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       4.761  -2.807   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       3.428  -2.037   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0       3.748  -0.530   0.000  0.00  0.00           O+0
HETATM   20  C   UNK     0       2.414   0.240   0.000  0.00  0.00           C+0
HETATM   21  O   UNK     0       2.253   1.771   0.000  0.00  0.00           O+0
HETATM   22  C   UNK     0       1.270  -0.791   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      -0.237  -0.471   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       1.896  -2.198   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       6.919  -4.053   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0       7.546  -2.646   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8   24                                                  
CONECT    8    7    9                                                       
CONECT    9    8   10   11   15                                             
CONECT   10    9                                                            
CONECT   11    9   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14   15   16                                             
CONECT   14   13                                                            
CONECT   15   13    9                                                       
CONECT   16   13   17   25                                                  
CONECT   17   16   18                                                       
CONECT   18   17   19   24                                                  
CONECT   19   18   20                                                       
CONECT   20   19   21   22                                                  
CONECT   21   20                                                            
CONECT   22   20   23   24                                                  
CONECT   23   22                                                            
CONECT   24   22    7   18                                                  
CONECT   25   16   26                                                       
CONECT   26   25                                                            
MASTER        0    0    0    0    0    0    0    0   26    0   56    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₀H₃₀O₆

Average Mass

366.4540 Da

Monoisotopic Mass

366.20424 Da

IUPAC Name

1-hydroxy-2-(hydroxymethyl)-11-methyl-9-(2-methylbutoxy)-7-methylidene-5,14-dioxatricyclo[9.2.1.0⁴,⁸]tetradec-2-en-6-one

Traditional Name

1-hydroxy-2-(hydroxymethyl)-11-methyl-9-(2-methylbutoxy)-7-methylidene-5,14-dioxatricyclo[9.2.1.0⁴,⁸]tetradec-2-en-6-one

CAS Registry Number

Not Available

SMILES

CCC(C)COC1CC2(C)CCC(O)(O2)C(CO)=CC2OC(=O)C(=C)C12

InChI Identifier

InChI=1S/C20H30O6/c1-5-12(2)11-24-16-9-19(4)6-7-20(23,26-19)14(10-21)8-15-17(16)13(3)18(22)25-15/h8,12,15-17,21,23H,3,5-7,9-11H2,1-2,4H3

InChI Key

PCHLUXXZPOQAHL-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Not Available

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as terpene lactones. These are prenol lipids containing a lactone ring.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Terpene lactones

Direct Parent

Terpene lactones

Alternative Parents

Substituents

Terpene lactone
Sesquiterpenoid
Gamma butyrolactone
Alpha,beta-unsaturated carboxylic ester
Enoate ester
Tetrahydrofuran
Carboxylic acid ester
Hemiacetal
Lactone
Carboxylic acid derivative
Dialkyl ether
Ether
Oxacycle
Monocarboxylic acid or derivatives
Organoheterocyclic compound
Organic oxide
Carbonyl group
Hydrocarbon derivative
Alcohol
Organic oxygen compound
Organooxygen compound
Primary alcohol
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.98	ALOGPS
logP	1.97	ChemAxon
logS	-2.9	ALOGPS
pKa (Strongest Acidic)	11.41	ChemAxon
pKa (Strongest Basic)	-2.8	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	85.22 Å²	ChemAxon
Rotatable Bond Count	5	ChemAxon
Refractivity	96.84 m³·mol⁻¹	ChemAxon
Polarizability	39.18 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for 1-hydroxy-2-(hydroxymethyl)-11-methyl-9-(2-methylbutoxy)-7-methylidene-5,14-dioxatricyclo[9.2.1.0⁴,⁸]tetradec-2-en-6-one (NP0328407)

MOL for NP0328407 (1-hydroxy-2-(hydroxymethyl)-11-methyl-9-(2-methylbutoxy)-7-methylidene-5,14-dioxatricyclo[9.2.1.0⁴,⁸]tetradec-2-en-6-one)

3D MOL for NP0328407 (1-hydroxy-2-(hydroxymethyl)-11-methyl-9-(2-methylbutoxy)-7-methylidene-5,14-dioxatricyclo[9.2.1.0⁴,⁸]tetradec-2-en-6-one)

3D SDF for NP0328407 (1-hydroxy-2-(hydroxymethyl)-11-methyl-9-(2-methylbutoxy)-7-methylidene-5,14-dioxatricyclo[9.2.1.0⁴,⁸]tetradec-2-en-6-one)

3D-SDF for NP0328407 (1-hydroxy-2-(hydroxymethyl)-11-methyl-9-(2-methylbutoxy)-7-methylidene-5,14-dioxatricyclo[9.2.1.0⁴,⁸]tetradec-2-en-6-one)

PDB for NP0328407 (1-hydroxy-2-(hydroxymethyl)-11-methyl-9-(2-methylbutoxy)-7-methylidene-5,14-dioxatricyclo[9.2.1.0⁴,⁸]tetradec-2-en-6-one)

3D PDB for NP0328407 (1-hydroxy-2-(hydroxymethyl)-11-methyl-9-(2-methylbutoxy)-7-methylidene-5,14-dioxatricyclo[9.2.1.0⁴,⁸]tetradec-2-en-6-one)

SMILES for NP0328407 (1-hydroxy-2-(hydroxymethyl)-11-methyl-9-(2-methylbutoxy)-7-methylidene-5,14-dioxatricyclo[9.2.1.0⁴,⁸]tetradec-2-en-6-one)

INCHI for NP0328407 (1-hydroxy-2-(hydroxymethyl)-11-methyl-9-(2-methylbutoxy)-7-methylidene-5,14-dioxatricyclo[9.2.1.0⁴,⁸]tetradec-2-en-6-one)

Structure for NP0328407 (1-hydroxy-2-(hydroxymethyl)-11-methyl-9-(2-methylbutoxy)-7-methylidene-5,14-dioxatricyclo[9.2.1.0⁴,⁸]tetradec-2-en-6-one)

3D Structure for NP0328407 (1-hydroxy-2-(hydroxymethyl)-11-methyl-9-(2-methylbutoxy)-7-methylidene-5,14-dioxatricyclo[9.2.1.0⁴,⁸]tetradec-2-en-6-one)