NP-MRD: Showing NP-Card for (2e)-3-[5-(acetyloxy)-4,5-dihydrofuran-3-yl]-n-(2-hydroxy-5-oxocyclopent-1-en-1-yl)prop-2-enimidic acid (NP0326503)

Jump To Section:

Identification Spectra BioTaxonomy ChemoTaxonomy Physical properties Links References XML

Record Information

Version

2.0

Created at

2022-09-12 08:06:51 UTC

Updated at

2022-09-12 08:06:51 UTC

NP-MRD ID

NP0326503

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(2e)-3-[5-(acetyloxy)-4,5-dihydrofuran-3-yl]-n-(2-hydroxy-5-oxocyclopent-1-en-1-yl)prop-2-enimidic acid

Description

68748-55-0, Also known as reductiomycin, belongs to the class of organic compounds known as dihydrofurans. Dihydrofurans are compounds containing a dihydrofuran moiety, which is a furan derivative with only one double bond. (2e)-3-[5-(acetyloxy)-4,5-dihydrofuran-3-yl]-n-(2-hydroxy-5-oxocyclopent-1-en-1-yl)prop-2-enimidic acid is found in Streptomyces griseorubiginosus. Based on a literature review very few articles have been published on 68748-55-0.

Structure

MOL 3D MOL SDF PDB SMILES InChI

     RDKit          3D

 36 37  0  0  0  0  0  0  0  0999 V2000
    5.6825    1.8006    0.5132 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4923    0.3997    0.0555 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2997   -0.1748   -0.7144 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.3943   -0.2842    0.4930 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.0753   -1.6099    0.1513 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.6512   -1.6928   -0.4223 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8831   -1.5693    0.8609 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5097   -1.1031    0.9726 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1924   -0.7376   -0.1007 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5615   -0.2736    0.0172 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2041   -0.1865    1.2350 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1933    0.0662   -1.0459 N   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5392    0.5340   -1.0326 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0295    1.4830   -0.2593 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2462    2.1696    0.6792 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4719    1.6850   -0.5405 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8641    0.4634   -1.3103 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5831    0.0108   -1.8956 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4431   -0.6813   -2.9250 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.6427   -1.9481    1.8742 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8714   -2.3190    1.3576 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7592    1.8022    1.6116 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.8025    2.4154    0.1711 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.6243    2.1877    0.0383 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7963   -2.0823   -0.5192 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5242   -2.6737   -0.8927 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4443   -0.8816   -1.1197 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0196   -1.0390    1.9224 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3242   -0.8114   -1.0459 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2605   -0.9355    1.8982 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0475    3.1539    0.6009 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0018    1.7369    0.4367 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6260    2.6199   -1.1364 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5240    0.7584   -2.1716 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3410   -0.3242   -0.6932 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3324   -1.9589    2.9364 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  2  0
  2  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  2  0
  9 10  1  0
 10 11  1  0
 10 12  2  0
 12 13  1  0
 13 14  2  0
 14 15  1  0
 14 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  2  0
  7 20  2  0
 20 21  1  0
 21  5  1  0
 18 13  1  0
  1 22  1  0
  1 23  1  0
  1 24  1  0
  5 25  1  6
  6 26  1  0
  6 27  1  0
  8 28  1  0
  9 29  1  0
 11 30  1  0
 15 31  1  0
 16 32  1  0
 16 33  1  0
 17 34  1  0
 17 35  1  0
 20 36  1  0
M  END


  Mrv1652309122210062D          

 21 22  0  0  0  0            999 V2000
    2.6658   -0.8550    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6658   -1.6800    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9513   -2.0925    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.3802   -2.0925    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.3802   -2.9175    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0477   -3.4024    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7927   -4.1871    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2777   -4.8545    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0981   -4.7683    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5831   -5.4357    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2475   -6.1894    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.4036   -5.3495    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    6.8885   -6.0169    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.7135   -6.0169    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.1984   -5.3495    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.9684   -6.8015    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.3010   -7.2864    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6335   -6.8015    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8489   -7.0565    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9677   -4.1871    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7128   -3.4024    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  2  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  2  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 10 12  2  0  0  0  0
 12 13  1  4  0  0  0
 13 14  2  0  0  0  0
 14 15  1  0  0  0  0
 14 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 13 18  1  0  0  0  0
 18 19  2  0  0  0  0
  7 20  2  0  0  0  0
 20 21  1  0  0  0  0
  5 21  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0326503

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC(=O)OC1CC(\C=C\C(O)=NC2=C(O)CCC2=O)=CO1

> <INCHI_IDENTIFIER>
InChI=1S/C14H15NO6/c1-8(16)21-13-6-9(7-20-13)2-5-12(19)15-14-10(17)3-4-11(14)18/h2,5,7,13,17H,3-4,6H2,1H3,(H,15,19)/b5-2+

> <INCHI_KEY>
VKXPFUZQXMQEDU-GORDUTHDSA-N

> <FORMULA>
C14H15NO6

> <MOLECULAR_WEIGHT>
293.275

> <EXACT_MASS>
293.089937207

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_ATOM_COUNT>
36

> <JCHEM_AVERAGE_POLARIZABILITY>
29.49311422618371

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(2E)-3-[5-(acetyloxy)-4,5-dihydrofuran-3-yl]-N-(2-hydroxy-5-oxocyclopent-1-en-1-yl)prop-2-enimidic acid

> <JCHEM_LOGP>
0.12125885799999969

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
10.47978409206459

> <JCHEM_PKA_STRONGEST_ACIDIC>
5.597780252679569

> <JCHEM_PKA_STRONGEST_BASIC>
0.9213826876895485

> <JCHEM_POLAR_SURFACE_AREA>
105.42

> <JCHEM_REFRACTIVITY>
74.91380000000001

> <JCHEM_ROTATABLE_BOND_COUNT>
5

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
(2E)-3-[5-(acetyloxy)-4,5-dihydrofuran-3-yl]-N-(2-hydroxy-5-oxocyclopent-1-en-1-yl)prop-2-enimidic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 12-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   12-SEP-22         0                                  
HETATM    1  C   UNK     0       4.976  -1.596   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       4.976  -3.136   0.000  0.00  0.00           C+0
HETATM    3  O   UNK     0       3.642  -3.906   0.000  0.00  0.00           O+0
HETATM    4  O   UNK     0       6.310  -3.906   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0       6.310  -5.446   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       7.556  -6.351   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       7.080  -7.816   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       7.985  -9.062   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       9.517  -8.901   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      10.422 -10.147   0.000  0.00  0.00           C+0
HETATM   11  O   UNK     0       9.795 -11.553   0.000  0.00  0.00           O+0
HETATM   12  N   UNK     0      11.953  -9.986   0.000  0.00  0.00           N+0
HETATM   13  C   UNK     0      12.858 -11.232   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      14.398 -11.232   0.000  0.00  0.00           C+0
HETATM   15  O   UNK     0      15.304  -9.986   0.000  0.00  0.00           O+0
HETATM   16  C   UNK     0      14.874 -12.696   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      13.628 -13.601   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      12.383 -12.696   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0      10.918 -13.172   0.000  0.00  0.00           O+0
HETATM   20  C   UNK     0       5.540  -7.816   0.000  0.00  0.00           C+0
HETATM   21  O   UNK     0       5.064  -6.351   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3    4                                                  
CONECT    3    2                                                            
CONECT    4    2    5                                                       
CONECT    5    4    6   21                                                  
CONECT    6    5    7                                                       
CONECT    7    6    8   20                                                  
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11   12                                                  
CONECT   11   10                                                            
CONECT   12   10   13                                                       
CONECT   13   12   14   18                                                  
CONECT   14   13   15   16                                                  
CONECT   15   14                                                            
CONECT   16   14   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   13   19                                                  
CONECT   19   18                                                            
CONECT   20    7   21                                                       
CONECT   21   20    5                                                       
MASTER        0    0    0    0    0    0    0    0   21    0   44    0
END

View in JSmol

Synonyms

Value	Source
Reductiomycin	MeSH

Chemical Formula

C₁₄H₁₅NO₆

Average Mass

293.2750 Da

Monoisotopic Mass

293.08994 Da

IUPAC Name

(2E)-3-[5-(acetyloxy)-4,5-dihydrofuran-3-yl]-N-(2-hydroxy-5-oxocyclopent-1-en-1-yl)prop-2-enimidic acid

Traditional Name

(2E)-3-[5-(acetyloxy)-4,5-dihydrofuran-3-yl]-N-(2-hydroxy-5-oxocyclopent-1-en-1-yl)prop-2-enimidic acid

CAS Registry Number

Not Available

SMILES

CC(=O)OC1CC(\C=C\C(O)=NC2=C(O)CCC2=O)=CO1

InChI Identifier

InChI=1S/C14H15NO6/c1-8(16)21-13-6-9(7-20-13)2-5-12(19)15-14-10(17)3-4-11(14)18/h2,5,7,13,17H,3-4,6H2,1H3,(H,15,19)/b5-2+

InChI Key

VKXPFUZQXMQEDU-GORDUTHDSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Streptomyces griseorubiginosus	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as dihydrofurans. Dihydrofurans are compounds containing a dihydrofuran moiety, which is a furan derivative with only one double bond.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Dihydrofurans

Sub Class

Not Available

Direct Parent

Dihydrofurans

Alternative Parents

Substituents

Dihydrofuran
Vinylogous acid
Carboxamide group
Carboxylic acid ester
Cyclic ketone
Secondary carboxylic acid amide
Ketone
Acetal
Carboxylic acid derivative
Oxacycle
Monocarboxylic acid or derivatives
Organic nitrogen compound
Organonitrogen compound
Organooxygen compound
Hydrocarbon derivative
Organic oxide
Organopnictogen compound
Organic oxygen compound
Carbonyl group
Aliphatic heteromonocyclic compound

Molecular Framework

Aliphatic heteromonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	0.12	ChemAxon
pKa (Strongest Acidic)	5.6	ChemAxon
pKa (Strongest Basic)	0.92	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	6	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	105.42 Å²	ChemAxon
Rotatable Bond Count	5	ChemAxon
Refractivity	74.91 m³·mol⁻¹	ChemAxon
Polarizability	29.49 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00018339

Chemspider ID

4943548

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

6439115

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (2e)-3-[5-(acetyloxy)-4,5-dihydrofuran-3-yl]-n-(2-hydroxy-5-oxocyclopent-1-en-1-yl)prop-2-enimidic acid (NP0326503)

MOL for NP0326503 ((2e)-3-[5-(acetyloxy)-4,5-dihydrofuran-3-yl]-n-(2-hydroxy-5-oxocyclopent-1-en-1-yl)prop-2-enimidic acid)

3D MOL for NP0326503 ((2e)-3-[5-(acetyloxy)-4,5-dihydrofuran-3-yl]-n-(2-hydroxy-5-oxocyclopent-1-en-1-yl)prop-2-enimidic acid)

3D SDF for NP0326503 ((2e)-3-[5-(acetyloxy)-4,5-dihydrofuran-3-yl]-n-(2-hydroxy-5-oxocyclopent-1-en-1-yl)prop-2-enimidic acid)

3D-SDF for NP0326503 ((2e)-3-[5-(acetyloxy)-4,5-dihydrofuran-3-yl]-n-(2-hydroxy-5-oxocyclopent-1-en-1-yl)prop-2-enimidic acid)

PDB for NP0326503 ((2e)-3-[5-(acetyloxy)-4,5-dihydrofuran-3-yl]-n-(2-hydroxy-5-oxocyclopent-1-en-1-yl)prop-2-enimidic acid)

3D PDB for NP0326503 ((2e)-3-[5-(acetyloxy)-4,5-dihydrofuran-3-yl]-n-(2-hydroxy-5-oxocyclopent-1-en-1-yl)prop-2-enimidic acid)

SMILES for NP0326503 ((2e)-3-[5-(acetyloxy)-4,5-dihydrofuran-3-yl]-n-(2-hydroxy-5-oxocyclopent-1-en-1-yl)prop-2-enimidic acid)

INCHI for NP0326503 ((2e)-3-[5-(acetyloxy)-4,5-dihydrofuran-3-yl]-n-(2-hydroxy-5-oxocyclopent-1-en-1-yl)prop-2-enimidic acid)

Structure for NP0326503 ((2e)-3-[5-(acetyloxy)-4,5-dihydrofuran-3-yl]-n-(2-hydroxy-5-oxocyclopent-1-en-1-yl)prop-2-enimidic acid)

3D Structure for NP0326503 ((2e)-3-[5-(acetyloxy)-4,5-dihydrofuran-3-yl]-n-(2-hydroxy-5-oxocyclopent-1-en-1-yl)prop-2-enimidic acid)