NP-MRD: Showing NP-Card for 3,5-dihydroxy-7-methoxy-6-methyl-1-oxo-3h-2-benzofuran-4-carboxylic acid (NP0325065)

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Record Information

Version

2.0

Created at

2022-09-12 05:32:17 UTC

Updated at

2022-09-12 05:32:18 UTC

NP-MRD ID

NP0325065

Secondary Accession Numbers

None

Natural Product Identification

Common Name

3,5-dihydroxy-7-methoxy-6-methyl-1-oxo-3h-2-benzofuran-4-carboxylic acid

Description

(+/-)-Strobide B belongs to the class of organic compounds known as m-phthalic acid and derivatives. These are aromatic compounds containing a benzene ring bearing a carboxylic acid group at ring carbon atoms 1 and 2. 3,5-dihydroxy-7-methoxy-6-methyl-1-oxo-3h-2-benzofuran-4-carboxylic acid is found in Coccomyces strobi. Based on a literature review very few articles have been published on (+/-)-strobide B.

Structure

MOL 3D MOL SDF PDB SMILES InChI

     RDKit          3D

 28 29  0  0  0  0  0  0  0  0999 V2000
   -3.0591    1.4842    0.7050 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2642    1.2797   -0.4589 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0974    0.5756   -0.3140 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0936   -0.7802   -0.4605 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3353   -1.5388   -0.7788 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1206   -1.4742   -0.3052 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0370   -2.8267   -0.4674 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2786   -0.8049   -0.0131 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5471   -1.5016    0.1616 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5605   -0.8080    0.4289 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.6639   -2.8449    0.0471 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2364    0.5899    0.1291 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0637    1.2703   -0.0183 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3443    2.6793    0.2183 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5501    3.5963    0.1547 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.6741    2.8072    0.5032 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2974    1.5594    0.4022 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.3013    1.5555   -0.5716 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4849    1.2932    1.6330 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4449    2.5190    0.6322 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9395    0.8085    0.7197 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1477   -2.6135   -0.7393 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1626   -1.3155   -0.0834 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7222   -1.2437   -1.7982 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6678   -3.5524   -0.4265 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7674   -3.4693    0.8200 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8115    1.3460    1.3672 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9299    1.4095   -1.4872 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  4  6  1  0
  6  7  1  0
  6  8  2  0
  8  9  1  0
  9 11  1  0
  9 10  2  0
  8 12  1  0
 12 13  2  0
 13 14  1  0
 14 15  2  0
 14 16  1  0
 16 17  1  0
 17 18  1  0
 13  3  1  0
 17 12  1  0
  1 19  1  0
  1 20  1  0
  1 21  1  0
  5 22  1  0
  5 23  1  0
  5 24  1  0
  7 25  1  0
 11 26  1  0
 17 27  1  1
 18 28  1  0
M  END


  Mrv1652309122207322D          

 18 19  0  0  0  0            999 V2000
    2.5645    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2789    2.0625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2789    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9934    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7079    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9934    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7079   -0.4125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2789   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2789   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9934   -1.6500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5645   -1.6500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5645    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5645    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7798    1.0799    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5249    1.8646    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2949    0.4125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7798   -0.2549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5249   -1.0396    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  4  6  1  0  0  0  0
  6  7  1  0  0  0  0
  6  8  2  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
  9 11  1  0  0  0  0
  8 12  1  0  0  0  0
 12 13  2  0  0  0  0
  3 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  2  0  0  0  0
 14 16  1  0  0  0  0
 16 17  1  0  0  0  0
 12 17  1  0  0  0  0
 17 18  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0325065

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC1=C(C)C(O)=C(C(O)=O)C2=C1C(=O)OC2O

> <INCHI_IDENTIFIER>
InChI=1S/C11H10O7/c1-3-7(12)5(9(13)14)4-6(8(3)17-2)11(16)18-10(4)15/h10,12,15H,1-2H3,(H,13,14)

> <INCHI_KEY>
MUGQOWYFWURKCM-UHFFFAOYSA-N

> <FORMULA>
C11H10O7

> <MOLECULAR_WEIGHT>
254.194

> <EXACT_MASS>
254.042652662

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_ATOM_COUNT>
28

> <JCHEM_AVERAGE_POLARIZABILITY>
22.729428704815763

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
3,5-dihydroxy-7-methoxy-6-methyl-1-oxo-1,3-dihydro-2-benzofuran-4-carboxylic acid

> <JCHEM_LOGP>
1.5234938496666666

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
10.968661773610702

> <JCHEM_PKA_STRONGEST_ACIDIC>
2.27518251928479

> <JCHEM_PKA_STRONGEST_BASIC>
-4.604947825546177

> <JCHEM_POLAR_SURFACE_AREA>
113.29

> <JCHEM_REFRACTIVITY>
58.40930000000001

> <JCHEM_ROTATABLE_BOND_COUNT>
2

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
3,5-dihydroxy-7-methoxy-6-methyl-1-oxo-3H-2-benzofuran-4-carboxylic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 12-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   12-SEP-22         0                                  
HETATM    1  C   UNK     0       4.787   4.620   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0       6.121   3.850   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0       6.121   2.310   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       7.454   1.540   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       8.788   2.310   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       7.454   0.000   0.000  0.00  0.00           C+0
HETATM    7  O   UNK     0       8.788  -0.770   0.000  0.00  0.00           O+0
HETATM    8  C   UNK     0       6.121  -0.770   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       6.121  -2.310   0.000  0.00  0.00           C+0
HETATM   10  O   UNK     0       7.454  -3.080   0.000  0.00  0.00           O+0
HETATM   11  O   UNK     0       4.787  -3.080   0.000  0.00  0.00           O+0
HETATM   12  C   UNK     0       4.787   0.000   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       4.787   1.540   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       3.322   2.016   0.000  0.00  0.00           C+0
HETATM   15  O   UNK     0       2.846   3.481   0.000  0.00  0.00           O+0
HETATM   16  O   UNK     0       2.417   0.770   0.000  0.00  0.00           O+0
HETATM   17  C   UNK     0       3.322  -0.476   0.000  0.00  0.00           C+0
HETATM   18  O   UNK     0       2.846  -1.941   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4   13                                                  
CONECT    4    3    5    6                                                  
CONECT    5    4                                                            
CONECT    6    4    7    8                                                  
CONECT    7    6                                                            
CONECT    8    6    9   12                                                  
CONECT    9    8   10   11                                                  
CONECT   10    9                                                            
CONECT   11    9                                                            
CONECT   12    8   13   17                                                  
CONECT   13   12    3   14                                                  
CONECT   14   13   15   16                                                  
CONECT   15   14                                                            
CONECT   16   14   17                                                       
CONECT   17   16   12   18                                                  
CONECT   18   17                                                            
MASTER        0    0    0    0    0    0    0    0   18    0   38    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₁₁H₁₀O₇

Average Mass

254.1940 Da

Monoisotopic Mass

254.04265 Da

IUPAC Name

3,5-dihydroxy-7-methoxy-6-methyl-1-oxo-1,3-dihydro-2-benzofuran-4-carboxylic acid

Traditional Name

3,5-dihydroxy-7-methoxy-6-methyl-1-oxo-3H-2-benzofuran-4-carboxylic acid

CAS Registry Number

Not Available

SMILES

COC1=C(C)C(O)=C(C(O)=O)C2=C1C(=O)OC2O

InChI Identifier

InChI=1S/C11H10O7/c1-3-7(12)5(9(13)14)4-6(8(3)17-2)11(16)18-10(4)15/h10,12,15H,1-2H3,(H,13,14)

InChI Key

MUGQOWYFWURKCM-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Coccomyces strobi	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as m-phthalic acid and derivatives. These are aromatic compounds containing a benzene ring bearing a carboxylic acid group at ring carbon atoms 1 and 2.

Kingdom

Organic compounds

Super Class

Benzenoids

Class

Benzene and substituted derivatives

Sub Class

Benzoic acids and derivatives

Direct Parent

M-phthalic acid and derivatives

Alternative Parents

Substituents

Meta_phthalic_acid
P-methoxybenzoic acid or derivatives
Isobenzofuranone
Benzofuranone
Salicylic acid or derivatives
Phthalide
Hydroxybenzoic acid
Isocoumaran
Anisole
Phenol ether
Alkyl aryl ether
Phenol
Vinylogous acid
Carboxylic acid ester
Hemiacetal
Lactone
Carboxylic acid derivative
Oxacycle
Carboxylic acid
Ether
Organoheterocyclic compound
Organic oxide
Hydrocarbon derivative
Organic oxygen compound
Organooxygen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.52	ChemAxon
pKa (Strongest Acidic)	2.28	ChemAxon
pKa (Strongest Basic)	-4.6	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	6	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	113.29 Å²	ChemAxon
Rotatable Bond Count	2	ChemAxon
Refractivity	58.41 m³·mol⁻¹	ChemAxon
Polarizability	22.73 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

22369818

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

44715406

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for 3,5-dihydroxy-7-methoxy-6-methyl-1-oxo-3h-2-benzofuran-4-carboxylic acid (NP0325065)

MOL for NP0325065 (3,5-dihydroxy-7-methoxy-6-methyl-1-oxo-3h-2-benzofuran-4-carboxylic acid)

3D MOL for NP0325065 (3,5-dihydroxy-7-methoxy-6-methyl-1-oxo-3h-2-benzofuran-4-carboxylic acid)

3D SDF for NP0325065 (3,5-dihydroxy-7-methoxy-6-methyl-1-oxo-3h-2-benzofuran-4-carboxylic acid)

3D-SDF for NP0325065 (3,5-dihydroxy-7-methoxy-6-methyl-1-oxo-3h-2-benzofuran-4-carboxylic acid)

PDB for NP0325065 (3,5-dihydroxy-7-methoxy-6-methyl-1-oxo-3h-2-benzofuran-4-carboxylic acid)

3D PDB for NP0325065 (3,5-dihydroxy-7-methoxy-6-methyl-1-oxo-3h-2-benzofuran-4-carboxylic acid)

SMILES for NP0325065 (3,5-dihydroxy-7-methoxy-6-methyl-1-oxo-3h-2-benzofuran-4-carboxylic acid)

INCHI for NP0325065 (3,5-dihydroxy-7-methoxy-6-methyl-1-oxo-3h-2-benzofuran-4-carboxylic acid)

Structure for NP0325065 (3,5-dihydroxy-7-methoxy-6-methyl-1-oxo-3h-2-benzofuran-4-carboxylic acid)

3D Structure for NP0325065 (3,5-dihydroxy-7-methoxy-6-methyl-1-oxo-3h-2-benzofuran-4-carboxylic acid)