NP-MRD: Showing NP-Card for methyl (2e)-5-[(1r,2s,3r,4ar,6s,8ar)-3-(acetyloxy)-6-hydroxy-1,2,4a-trimethyl-5-methylidene-hexahydro-2h-naphthalen-1-yl]-3-methylpent-2-enoate (NP0324294)

Jump To Section:

Identification Spectra BioTaxonomy ChemoTaxonomy Physical properties Links References XML

Record Information

Version

2.0

Created at

2022-09-12 04:17:22 UTC

Updated at

2022-09-12 04:17:22 UTC

NP-MRD ID

NP0324294

Secondary Accession Numbers

None

Natural Product Identification

Common Name

methyl (2e)-5-[(1r,2s,3r,4ar,6s,8ar)-3-(acetyloxy)-6-hydroxy-1,2,4a-trimethyl-5-methylidene-hexahydro-2h-naphthalen-1-yl]-3-methylpent-2-enoate

Description

(5Alpha,8alpha,9R,10beta)-7alpha-Acetoxy-3beta-hydroxycleroda-4(19),13-diene-15-oic acid methyl ester belongs to the class of organic compounds known as colensane and clerodane diterpenoids. These are diterpenoids with a structure based on the clerodane or the colensane skeleton. Clerodanes arise from labdanes by two methyl migrations. Based on a literature review very few articles have been published on (5alpha,8alpha,9R,10beta)-7alpha-Acetoxy-3beta-hydroxycleroda-4(19),13-diene-15-oic acid methyl ester.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309122206172D          

 28 29  0  0  1  0            999 V2000
    0.0000    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -0.4125    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.4289   -0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -1.2375    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.7145    0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -0.4125    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.8579   -0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724    1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -1.2375    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.8579   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -1.6500    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.8163   -2.3784    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0416   -2.3784    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2171   -2.4072    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1702   -3.1357    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2670   -3.8353    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9947   -3.1644    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3820   -3.8929    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9448   -4.5925    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2065   -3.9217    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5938   -4.6501    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  6  0  0  0
  3  5  1  0  0  0  0
  5  6  1  0  0  0  0
  7  6  1  1  0  0  0
  7  8  1  0  0  0  0
  2  8  1  0  0  0  0
  8  9  1  1  0  0  0
  8 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  1  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 13 15  2  0  0  0  0
 11 16  1  0  0  0  0
 16 17  1  1  0  0  0
 16 18  1  0  0  0  0
  7 18  1  0  0  0  0
 18 19  1  1  0  0  0
 18 20  1  6  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 22 24  2  0  0  0  0
 24 25  1  0  0  0  0
 25 26  2  0  0  0  0
 25 27  1  0  0  0  0
 27 28  1  0  0  0  0
M  END

     RDKit          3D

 64 65  0  0  0  0  0  0  0  0999 V2000
   -4.0467   -1.7204   -1.0611 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1978   -1.8546   -0.0740 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7976   -3.1681    0.5085 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.0947   -4.1226   -0.4885 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3879   -3.2620    0.9432 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5032   -2.0771    0.8756 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0778   -0.9349    0.1471 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.5266   -0.6754    0.5337 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.7288   -0.8809    2.0553 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0162    0.6355    0.1222 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2378    1.4065   -0.8844 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.3525    2.8003   -0.6369 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0493    3.6277   -1.4959 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1868    5.0763   -1.2683 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6005    3.1458   -2.5268 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8226    1.0333   -1.1286 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.0929    2.1826   -1.6925 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2427    0.3250    0.0554 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.3132    1.2172    1.2444 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1698   -0.1488   -0.0569 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2564    0.8360   -0.2268 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5507    0.0360   -0.2814 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7665   -0.9775   -1.3297 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4967    0.2398    0.6089 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7691   -0.4707    0.6439 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0849   -1.3604   -0.1888 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.7170   -0.1949    1.6197 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.9391   -0.8789    1.6515 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2676   -0.7349   -1.4476 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5440   -2.5939   -1.5095 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5246   -3.3814    1.3202 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0654   -4.2817   -0.4770 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9451   -4.1848    0.4520 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4009   -3.5893    2.0308 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0263   -1.8101    1.8671 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4061   -2.4140    0.2799 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1138   -1.2981   -0.9330 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1153    0.0732    2.5241 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5739   -1.5882    2.2602 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8538   -1.2992    2.5475 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0951    0.6231   -0.1095 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9979    1.2967    1.0599 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7831    1.2559   -1.8691 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5040    5.6235   -2.1735 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9599    5.2427   -0.4911 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2467    5.4760   -0.8739 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8373    0.2416   -1.9519 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4949    1.8826   -2.6131 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8611    2.8793   -2.1607 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4486    2.8243   -1.0048 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7065    1.5238    1.6202 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7872    2.1790    0.9619 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9119    0.8368    2.0943 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2388   -0.9015   -0.8724 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3746   -0.6568    0.9369 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4168    1.5497    0.5963 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2776    1.3540   -1.2263 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9083   -1.0527   -2.0310 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9324   -1.9600   -0.8433 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6789   -0.7794   -1.9495 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3349    0.9877    1.3805 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.3882   -0.8089    2.6552 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.7319   -1.9452    1.3932 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.6021   -0.4041    0.8882 H   0  0  0  0  0  0  0  0  0  0  0  0
 28 27  1  0
 27 25  1  0
 25 26  2  0
 25 24  1  0
 24 22  2  0
 22 23  1  0
 22 21  1  0
 21 20  1  0
 18 20  1  6
 18 19  1  0
 18 16  1  0
 16 17  1  0
 16 11  1  0
 11 10  1  0
 10  8  1  0
  8  9  1  1
  8  7  1  0
  7  6  1  0
  6  5  1  0
  5  3  1  0
  3  4  1  0
  3  2  1  0
  2  1  2  3
 11 12  1  0
 12 13  1  0
 13 14  1  0
 13 15  2  0
  7 18  1  0
  2  8  1  0
 28 62  1  0
 28 63  1  0
 28 64  1  0
 24 61  1  0
 23 58  1  0
 23 59  1  0
 23 60  1  0
 21 56  1  0
 21 57  1  0
 20 54  1  0
 20 55  1  0
 19 51  1  0
 19 52  1  0
 19 53  1  0
 16 47  1  6
 17 48  1  0
 17 49  1  0
 17 50  1  0
 11 43  1  6
 10 41  1  0
 10 42  1  0
  9 38  1  0
  9 39  1  0
  9 40  1  0
  7 37  1  6
  6 35  1  0
  6 36  1  0
  5 33  1  0
  5 34  1  0
  3 31  1  1
  4 32  1  0
  1 29  1  0
  1 30  1  0
 14 44  1  0
 14 45  1  0
 14 46  1  0
M  END


  Mrv1652309122206172D          

 28 29  0  0  1  0            999 V2000
    0.0000    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -0.4125    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.4289   -0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -1.2375    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.7145    0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -0.4125    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.8579   -0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724    1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -1.2375    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.8579   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -1.6500    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.8163   -2.3784    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0416   -2.3784    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2171   -2.4072    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1702   -3.1357    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2670   -3.8353    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9947   -3.1644    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3820   -3.8929    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9448   -4.5925    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2065   -3.9217    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5938   -4.6501    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  6  0  0  0
  3  5  1  0  0  0  0
  5  6  1  0  0  0  0
  7  6  1  1  0  0  0
  7  8  1  0  0  0  0
  2  8  1  0  0  0  0
  8  9  1  1  0  0  0
  8 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  1  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 13 15  2  0  0  0  0
 11 16  1  0  0  0  0
 16 17  1  1  0  0  0
 16 18  1  0  0  0  0
  7 18  1  0  0  0  0
 18 19  1  1  0  0  0
 18 20  1  6  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 22 24  2  0  0  0  0
 24 25  1  0  0  0  0
 25 26  2  0  0  0  0
 25 27  1  0  0  0  0
 27 28  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0324294

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC(=O)\C=C(/C)CC[C@@]1(C)[C@H](C)[C@@H](C[C@]2(C)[C@@H]1CC[C@H](O)C2=C)OC(C)=O

> <INCHI_IDENTIFIER>
InChI=1S/C23H36O5/c1-14(12-21(26)27-7)10-11-22(5)16(3)19(28-17(4)24)13-23(6)15(2)18(25)8-9-20(22)23/h12,16,18-20,25H,2,8-11,13H2,1,3-7H3/b14-12+/t16-,18+,19-,20-,22+,23+/m1/s1

> <INCHI_KEY>
MNVUZMNFPKHROO-ZRZSYHNPSA-N

> <FORMULA>
C23H36O5

> <MOLECULAR_WEIGHT>
392.536

> <EXACT_MASS>
392.256274259

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_ATOM_COUNT>
64

> <JCHEM_AVERAGE_POLARIZABILITY>
44.8388422786496

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
methyl (2E)-5-[(1R,2S,3R,4aR,6S,8aR)-3-(acetyloxy)-6-hydroxy-1,2,4a-trimethyl-5-methylidene-decahydronaphthalen-1-yl]-3-methylpent-2-enoate

> <JCHEM_LOGP>
3.7603619199999985

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
18.418826898704864

> <JCHEM_PKA_STRONGEST_BASIC>
-1.3034028443612686

> <JCHEM_POLAR_SURFACE_AREA>
72.83

> <JCHEM_REFRACTIVITY>
108.94980000000001

> <JCHEM_ROTATABLE_BOND_COUNT>
7

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
methyl (2E)-5-[(1R,2S,3R,4aR,6S,8aR)-3-(acetyloxy)-6-hydroxy-1,2,4a-trimethyl-5-methylidene-hexahydro-2H-naphthalen-1-yl]-3-methylpent-2-enoate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 12-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   12-SEP-22         0                                  
HETATM    1  C   UNK     0       0.000   1.540   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       0.000  -0.000   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -1.334  -0.770   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0      -2.667  -0.000   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0      -1.334  -2.310   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       0.000  -3.080   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       1.334  -2.310   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       1.334  -0.770   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       1.334   0.770   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       2.667  -0.000   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       4.001  -0.770   0.000  0.00  0.00           C+0
HETATM   12  O   UNK     0       5.335  -0.000   0.000  0.00  0.00           O+0
HETATM   13  C   UNK     0       5.335   1.540   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       4.001   2.310   0.000  0.00  0.00           C+0
HETATM   15  O   UNK     0       6.668   2.310   0.000  0.00  0.00           O+0
HETATM   16  C   UNK     0       4.001  -2.310   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       5.335  -3.080   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       2.667  -3.080   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       3.390  -4.440   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       1.944  -4.440   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       0.405  -4.493   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      -0.318  -5.853   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       0.498  -7.159   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      -1.857  -5.907   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      -2.580  -7.267   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0      -1.764  -8.573   0.000  0.00  0.00           O+0
HETATM   27  O   UNK     0      -4.119  -7.320   0.000  0.00  0.00           O+0
HETATM   28  C   UNK     0      -4.842  -8.680   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3    8                                                  
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8   18                                                  
CONECT    8    7    2    9   10                                             
CONECT    9    8                                                            
CONECT   10    8   11                                                       
CONECT   11   10   12   16                                                  
CONECT   12   11   13                                                       
CONECT   13   12   14   15                                                  
CONECT   14   13                                                            
CONECT   15   13                                                            
CONECT   16   11   17   18                                                  
CONECT   17   16                                                            
CONECT   18   16    7   19   20                                             
CONECT   19   18                                                            
CONECT   20   18   21                                                       
CONECT   21   20   22                                                       
CONECT   22   21   23   24                                                  
CONECT   23   22                                                            
CONECT   24   22   25                                                       
CONECT   25   24   26   27                                                  
CONECT   26   25                                                            
CONECT   27   25   28                                                       
CONECT   28   27                                                            
MASTER        0    0    0    0    0    0    0    0   28    0   58    0
END

View in JSmol

Synonyms

Value	Source
(5a,8a,9R,10b)-7a-Acetoxy-3b-hydroxycleroda-4(19),13-diene-15-Oate methyl ester	Generator
(5a,8a,9R,10b)-7a-Acetoxy-3b-hydroxycleroda-4(19),13-diene-15-Oic acid methyl ester	Generator
(5alpha,8alpha,9R,10beta)-7alpha-Acetoxy-3beta-hydroxycleroda-4(19),13-diene-15-Oate methyl ester	Generator
(5Α,8α,9R,10β)-7α-acetoxy-3β-hydroxycleroda-4(19),13-diene-15-Oate methyl ester	Generator
(5Α,8α,9R,10β)-7α-acetoxy-3β-hydroxycleroda-4(19),13-diene-15-Oic acid methyl ester	Generator

Chemical Formula

C₂₃H₃₆O₅

Average Mass

392.5360 Da

Monoisotopic Mass

392.25627 Da

IUPAC Name

methyl (2E)-5-[(1R,2S,3R,4aR,6S,8aR)-3-(acetyloxy)-6-hydroxy-1,2,4a-trimethyl-5-methylidene-decahydronaphthalen-1-yl]-3-methylpent-2-enoate

Traditional Name

methyl (2E)-5-[(1R,2S,3R,4aR,6S,8aR)-3-(acetyloxy)-6-hydroxy-1,2,4a-trimethyl-5-methylidene-hexahydro-2H-naphthalen-1-yl]-3-methylpent-2-enoate

CAS Registry Number

Not Available

SMILES

COC(=O)\C=C(/C)CC[C@@]1(C)[C@H](C)[C@@H](C[C@]2(C)[C@@H]1CC[C@H](O)C2=C)OC(C)=O

InChI Identifier

InChI=1S/C23H36O5/c1-14(12-21(26)27-7)10-11-22(5)16(3)19(28-17(4)24)13-23(6)15(2)18(25)8-9-20(22)23/h12,16,18-20,25H,2,8-11,13H2,1,3-7H3/b14-12+/t16-,18+,19-,20-,22+,23+/m1/s1

InChI Key

MNVUZMNFPKHROO-ZRZSYHNPSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Not Available

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as colensane and clerodane diterpenoids. These are diterpenoids with a structure based on the clerodane or the colensane skeleton. Clerodanes arise from labdanes by two methyl migrations.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Diterpenoids

Direct Parent

Colensane and clerodane diterpenoids

Alternative Parents

Substituents

Clerodane diterpenoid
Fatty acid ester
Dicarboxylic acid or derivatives
Fatty acyl
Cyclic alcohol
Alpha,beta-unsaturated carboxylic ester
Enoate ester
Methyl ester
Carboxylic acid ester
Secondary alcohol
Carboxylic acid derivative
Hydrocarbon derivative
Organic oxide
Organic oxygen compound
Alcohol
Carbonyl group
Organooxygen compound
Aliphatic homopolycyclic compound

Molecular Framework

Aliphatic homopolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.76	ChemAxon
pKa (Strongest Acidic)	18.42	ChemAxon
pKa (Strongest Basic)	-1.3	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	3	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	72.83 Å²	ChemAxon
Rotatable Bond Count	7	ChemAxon
Refractivity	108.95 m³·mol⁻¹	ChemAxon
Polarizability	44.84 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

101036868

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for methyl (2e)-5-[(1r,2s,3r,4ar,6s,8ar)-3-(acetyloxy)-6-hydroxy-1,2,4a-trimethyl-5-methylidene-hexahydro-2h-naphthalen-1-yl]-3-methylpent-2-enoate (NP0324294)

MOL for NP0324294 (methyl (2e)-5-[(1r,2s,3r,4ar,6s,8ar)-3-(acetyloxy)-6-hydroxy-1,2,4a-trimethyl-5-methylidene-hexahydro-2h-naphthalen-1-yl]-3-methylpent-2-enoate)

3D MOL for NP0324294 (methyl (2e)-5-[(1r,2s,3r,4ar,6s,8ar)-3-(acetyloxy)-6-hydroxy-1,2,4a-trimethyl-5-methylidene-hexahydro-2h-naphthalen-1-yl]-3-methylpent-2-enoate)

3D SDF for NP0324294 (methyl (2e)-5-[(1r,2s,3r,4ar,6s,8ar)-3-(acetyloxy)-6-hydroxy-1,2,4a-trimethyl-5-methylidene-hexahydro-2h-naphthalen-1-yl]-3-methylpent-2-enoate)

3D-SDF for NP0324294 (methyl (2e)-5-[(1r,2s,3r,4ar,6s,8ar)-3-(acetyloxy)-6-hydroxy-1,2,4a-trimethyl-5-methylidene-hexahydro-2h-naphthalen-1-yl]-3-methylpent-2-enoate)

PDB for NP0324294 (methyl (2e)-5-[(1r,2s,3r,4ar,6s,8ar)-3-(acetyloxy)-6-hydroxy-1,2,4a-trimethyl-5-methylidene-hexahydro-2h-naphthalen-1-yl]-3-methylpent-2-enoate)

3D PDB for NP0324294 (methyl (2e)-5-[(1r,2s,3r,4ar,6s,8ar)-3-(acetyloxy)-6-hydroxy-1,2,4a-trimethyl-5-methylidene-hexahydro-2h-naphthalen-1-yl]-3-methylpent-2-enoate)

SMILES for NP0324294 (methyl (2e)-5-[(1r,2s,3r,4ar,6s,8ar)-3-(acetyloxy)-6-hydroxy-1,2,4a-trimethyl-5-methylidene-hexahydro-2h-naphthalen-1-yl]-3-methylpent-2-enoate)

INCHI for NP0324294 (methyl (2e)-5-[(1r,2s,3r,4ar,6s,8ar)-3-(acetyloxy)-6-hydroxy-1,2,4a-trimethyl-5-methylidene-hexahydro-2h-naphthalen-1-yl]-3-methylpent-2-enoate)

Structure for NP0324294 (methyl (2e)-5-[(1r,2s,3r,4ar,6s,8ar)-3-(acetyloxy)-6-hydroxy-1,2,4a-trimethyl-5-methylidene-hexahydro-2h-naphthalen-1-yl]-3-methylpent-2-enoate)

3D Structure for NP0324294 (methyl (2e)-5-[(1r,2s,3r,4ar,6s,8ar)-3-(acetyloxy)-6-hydroxy-1,2,4a-trimethyl-5-methylidene-hexahydro-2h-naphthalen-1-yl]-3-methylpent-2-enoate)