| Record Information |
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| Version | 2.0 |
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| Created at | 2022-09-12 04:07:02 UTC |
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| Updated at | 2022-09-12 04:07:02 UTC |
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| NP-MRD ID | NP0324193 |
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| Secondary Accession Numbers | None |
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| Natural Product Identification |
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| Common Name | (3s,3ar,4s,6s,6ar,10s,12s,13r,15as)-3-benzyl-1,6-dihydroxy-13-methoxy-4,10,12-trimethyl-5-methylidene-15-oxo-3h,3ah,4h,6h,6ah,9h,10h,11h,13h,14h-cycloundeca[d]isoindol-12-yl acetate |
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| Description | Daldinin belongs to the class of organic compounds known as cytochalasans. These are fungal metabolites structurally characterized by the presence of an isoindolone nucleus fused to a macrocyclic ring, which can either a lactone, as in cytochalasin B, a carbonate, as in cytochalasin E, or a carbocycle, as in cytochalasin D, H, and K. (3s,3ar,4s,6s,6ar,10s,12s,13r,15as)-3-benzyl-1,6-dihydroxy-13-methoxy-4,10,12-trimethyl-5-methylidene-15-oxo-3h,3ah,4h,6h,6ah,9h,10h,11h,13h,14h-cycloundeca[d]isoindol-12-yl acetate is found in Daldinia concentrica. (3s,3ar,4s,6s,6ar,10s,12s,13r,15as)-3-benzyl-1,6-dihydroxy-13-methoxy-4,10,12-trimethyl-5-methylidene-15-oxo-3h,3ah,4h,6h,6ah,9h,10h,11h,13h,14h-cycloundeca[d]isoindol-12-yl acetate was first documented in 2008 (PMID: 18503188). Based on a literature review a small amount of articles have been published on Daldinin (PMID: 19769341) (PMID: 34519434) (PMID: 33670169) (PMID: 34334519). |
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| Structure | CO[C@@H]1CC(=O)[C@]23[C@H]([C@H](CC4=CC=CC=C4)N=C2O)[C@H](C)C(=C)[C@@H](O)[C@@H]3\C=C\C[C@H](C)C[C@]1(C)OC(C)=O InChI=1S/C31H41NO6/c1-18-11-10-14-23-28(35)20(3)19(2)27-24(15-22-12-8-7-9-13-22)32-29(36)31(23,27)25(34)16-26(37-6)30(5,17-18)38-21(4)33/h7-10,12-14,18-19,23-24,26-28,35H,3,11,15-17H2,1-2,4-6H3,(H,32,36)/b14-10+/t18-,19+,23-,24-,26+,27-,28+,30-,31+/m0/s1 |
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| Synonyms | Not Available |
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| Chemical Formula | C31H41NO6 |
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| Average Mass | 523.6700 Da |
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| Monoisotopic Mass | 523.29339 Da |
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| IUPAC Name | Not Available |
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| Traditional Name | Not Available |
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| CAS Registry Number | Not Available |
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| SMILES | CO[C@@H]1CC(=O)[C@]23[C@H]([C@H](CC4=CC=CC=C4)N=C2O)[C@H](C)C(=C)[C@@H](O)[C@@H]3\C=C\C[C@H](C)C[C@]1(C)OC(C)=O |
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| InChI Identifier | InChI=1S/C31H41NO6/c1-18-11-10-14-23-28(35)20(3)19(2)27-24(15-22-12-8-7-9-13-22)32-29(36)31(23,27)25(34)16-26(37-6)30(5,17-18)38-21(4)33/h7-10,12-14,18-19,23-24,26-28,35H,3,11,15-17H2,1-2,4-6H3,(H,32,36)/b14-10+/t18-,19+,23-,24-,26+,27-,28+,30-,31+/m0/s1 |
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| InChI Key | POXWDDFZAWCGIG-CHZWMTGQSA-N |
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| Experimental Spectra |
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| Not Available | | Predicted Spectra |
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| | Spectrum Type | Description | Depositor ID | Depositor Organization | Depositor | Deposition Date | View |
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| 1D NMR | 13C NMR Spectrum (1D, 25 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 100 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 252 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 1000 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 50 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 200 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 75 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 300 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 101 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 400 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 126 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 500 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 151 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 600 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 176 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 700 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 201 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 800 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 226 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 900 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum |
| | Chemical Shift Submissions |
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| Not Available | | Species |
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| Species of Origin | |
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| Chemical Taxonomy |
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| Description | Belongs to the class of organic compounds known as cytochalasans. These are fungal metabolites structurally characterized by the presence of an isoindolone nucleus fused to a macrocyclic ring, which can either a lactone, as in cytochalasin B, a carbonate, as in cytochalasin E, or a carbocycle, as in cytochalasin D, H, and K. |
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| Kingdom | Organic compounds |
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| Super Class | Alkaloids and derivatives |
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| Class | Cytochalasans |
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| Sub Class | Not Available |
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| Direct Parent | Cytochalasans |
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| Alternative Parents | |
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| Substituents | - Cytochalasan
- Carbocyclic cytochalasan skeleton
- Isoindolone
- Isoindole or derivatives
- Isoindole
- Isoindoline
- Benzenoid
- 2-pyrrolidone
- Pyrrolidone
- Monocyclic benzene moiety
- Pyrrolidine
- Cyclic alcohol
- Secondary carboxylic acid amide
- Secondary alcohol
- Lactam
- Ketone
- Carboxylic acid ester
- Carboxamide group
- Azacycle
- Organoheterocyclic compound
- Monocarboxylic acid or derivatives
- Ether
- Dialkyl ether
- Carboxylic acid derivative
- Organic nitrogen compound
- Organic oxygen compound
- Organopnictogen compound
- Organic oxide
- Hydrocarbon derivative
- Organooxygen compound
- Organonitrogen compound
- Carbonyl group
- Alcohol
- Aromatic heteropolycyclic compound
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| Molecular Framework | Aromatic heteropolycyclic compounds |
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| External Descriptors | Not Available |
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| Physical Properties |
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| State | Not Available |
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| Experimental Properties | | Property | Value | Reference |
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| Melting Point | Not Available | Not Available | | Boiling Point | Not Available | Not Available | | Water Solubility | Not Available | Not Available | | LogP | Not Available | Not Available |
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| Predicted Properties | |
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| General References | - Shao HJ, Qin XD, Dong ZJ, Zhang HB, Liu JK: Induced daldinin A, B, C with a new skeleton from cultures of the ascomycete Daldinia concentrica. J Antibiot (Tokyo). 2008 Mar;61(3):115-9. doi: 10.1038/ja.2008.119. [PubMed:18503188 ]
- Lu Z, Wang Y, Miao C, Liu P, Hong K, Zhu W: Sesquiterpenoids and benzofuranoids from the marine-derived fungus Aspergillus ustus 094102. J Nat Prod. 2009 Oct;72(10):1761-7. doi: 10.1021/np900268z. [PubMed:19769341 ]
- Zhang H, Lei XX, Shao S, Zhou X, Li Y, Yang B: Azaphilones and Meroterpenoids from the Soft Coral-Derived Fungus Penicillium glabrum glmu003. Chem Biodivers. 2021 Sep 14:e2100663. doi: 10.1002/cbdv.202100663. [PubMed:34519434 ]
- Lambert C, Pourmoghaddam MJ, Cedeno-Sanchez M, Surup F, Khodaparast SA, Krisai-Greilhuber I, Voglmayr H, Stradal TEB, Stadler M: Resolution of the Hypoxylon fuscum Complex (Hypoxylaceae, Xylariales) and Discovery and Biological Characterization of Two of Its Prominent Secondary Metabolites. J Fungi (Basel). 2021 Feb 11;7(2):131. doi: 10.3390/jof7020131. [PubMed:33670169 ]
- Sun Q, Hu S, Song Y, Zhu R, Li L, Li J, Zhang T, Gao Q, Wang Y, Fang L: Total Synthesis, Discovery and Biological Evaluation of Daldinin A Derivatives for Improving Hyperglycemia-Induced Endothelial Cell Death. Chem Pharm Bull (Tokyo). 2021;69(8):760-767. doi: 10.1248/cpb.c21-00211. [PubMed:34334519 ]
- LOTUS database [Link]
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