Showing NP-Card for dehydrodalpanol (NP0323954)

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Record Information
Version2.0
Created at2022-09-12 03:42:43 UTC
Updated at2022-09-12 03:42:43 UTC
NP-MRD IDNP0323954
Secondary Accession NumbersNone
Natural Product Identification
Common Namedehydrodalpanol
DescriptionDehydrodalpanol belongs to the class of organic compounds known as rotenones. These are rotenoids with a structure based on a 6a,12a-dihydrochromeno[3,4-b]chromen-12(6H)-one skeleton. Thus, dehydrodalpanol is considered to be a flavonoid lipid molecule. dehydrodalpanol is found in Amorpha fruticosa and Dalbergia lanceolaria. Dehydrodalpanol is a very hydrophobic molecule, practically insoluble (in water), and relatively neutral.
Structure
Thumb
MOLSDFPDBSMILESInChI

MOL for NP0323954 (dehydrodalpanol)

  Mrv1533004181502502D          

 30 34  0  0  0  0            999 V2000
   -0.6225   -2.5542    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2209   -3.2749    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6040   -3.2875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0056   -4.0081    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8305   -4.0207    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2321   -4.7413    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0570   -4.7539    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4803   -4.0458    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0788   -3.3251    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5021   -2.6170    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1005   -1.8963    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.3270   -2.6295    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7503   -1.9214    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5752   -1.9340    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9768   -2.6546    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7811   -2.8384    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.8548   -3.6601    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0961   -3.9842    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5535   -3.3627    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7286   -3.3502    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3052   -4.0583    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.5629   -4.0834    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.2710   -4.5067    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1396   -4.7915    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9862   -3.3753    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2538   -3.3125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8523   -2.5919    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0274   -2.5793    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6258   -1.8587    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1991   -1.8461    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  2  0  0  0  0
  9 10  1  0  0  0  0
 10 11  2  0  0  0  0
 10 12  1  0  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
 14 15  2  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 15 19  1  0  0  0  0
 19 20  2  0  0  0  0
 12 20  1  0  0  0  0
 20 21  1  0  0  0  0
  8 21  1  0  0  0  0
 17 22  1  0  0  0  0
 22 23  1  0  0  0  0
 22 24  1  0  0  0  0
 22 25  1  0  0  0  0
  9 26  1  0  0  0  0
  5 26  2  0  0  0  0
 26 27  1  0  0  0  0
 27 28  2  0  0  0  0
  3 28  1  0  0  0  0
 28 29  1  0  0  0  0
 29 30  1  0  0  0  0
M  END
Download

3D MOL for NP0323954 (dehydrodalpanol)

Download
3D SDF for NP0323954 (dehydrodalpanol)
  Mrv1533004181502502D          

 30 34  0  0  0  0            999 V2000
   -0.6225   -2.5542    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2209   -3.2749    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6040   -3.2875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0056   -4.0081    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8305   -4.0207    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2321   -4.7413    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0570   -4.7539    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4803   -4.0458    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0788   -3.3251    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5021   -2.6170    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1005   -1.8963    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.3270   -2.6295    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7503   -1.9214    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5752   -1.9340    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9768   -2.6546    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7811   -2.8384    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.8548   -3.6601    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0961   -3.9842    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5535   -3.3627    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7286   -3.3502    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3052   -4.0583    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.5629   -4.0834    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.2710   -4.5067    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1396   -4.7915    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9862   -3.3753    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2538   -3.3125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8523   -2.5919    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0274   -2.5793    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6258   -1.8587    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1991   -1.8461    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  2  0  0  0  0
  9 10  1  0  0  0  0
 10 11  2  0  0  0  0
 10 12  1  0  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
 14 15  2  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 15 19  1  0  0  0  0
 19 20  2  0  0  0  0
 12 20  1  0  0  0  0
 20 21  1  0  0  0  0
  8 21  1  0  0  0  0
 17 22  1  0  0  0  0
 22 23  1  0  0  0  0
 22 24  1  0  0  0  0
 22 25  1  0  0  0  0
  9 26  1  0  0  0  0
  5 26  2  0  0  0  0
 26 27  1  0  0  0  0
 27 28  2  0  0  0  0
  3 28  1  0  0  0  0
 28 29  1  0  0  0  0
 29 30  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0323954

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC1=CC2=C(C=C1OC)C1=C(CO2)OC2=C3CC(OC3=CC=C2C1=O)C(C)(C)O

> <INCHI_IDENTIFIER>
InChI=1S/C23H22O7/c1-23(2,25)19-8-13-14(29-19)6-5-11-21(24)20-12-7-16(26-3)17(27-4)9-15(12)28-10-18(20)30-22(11)13/h5-7,9,19,25H,8,10H2,1-4H3

> <INCHI_KEY>
XEYKGWOEWOJOKM-UHFFFAOYSA-N

> <FORMULA>
C23H22O7

> <MOLECULAR_WEIGHT>
410.422

> <EXACT_MASS>
410.136553048

> <JCHEM_ACCEPTOR_COUNT>
7

> <JCHEM_ATOM_COUNT>
52

> <JCHEM_AVERAGE_POLARIZABILITY>
44.06445176888174

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
6-(2-hydroxypropan-2-yl)-16,17-dimethoxy-2,7,20-trioxapentacyclo[11.8.0.0³,¹¹.0⁴,⁸.0¹⁴,¹⁹]henicosa-1(13),3,8,10,14(19),15,17-heptaen-12-one

> <ALOGPS_LOGP>
2.59

> <JCHEM_LOGP>
2.4873283613333323

> <ALOGPS_LOGS>
-4.28

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
14.296670429222267

> <JCHEM_PKA_STRONGEST_BASIC>
-3.1064363542581805

> <JCHEM_POLAR_SURFACE_AREA>
83.45000000000002

> <JCHEM_REFRACTIVITY>
109.02360000000002

> <JCHEM_ROTATABLE_BOND_COUNT>
3

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
2.17e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
dehydrodalpanol

> <JCHEM_VEBER_RULE>
0

$$$$

Download
3D-SDF for NP0323954 (dehydrodalpanol)
Download
PDB for NP0323954 (dehydrodalpanol)
HEADER    PROTEIN                                 18-APR-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   18-APR-15         0                                  
HETATM    1  C   UNK     0      -1.162  -4.768   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0      -0.412  -6.113   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0       1.128  -6.137   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       1.877  -7.482   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       3.417  -7.505   0.000  0.00  0.00           C+0
HETATM    6  O   UNK     0       4.167  -8.850   0.000  0.00  0.00           O+0
HETATM    7  C   UNK     0       5.706  -8.874   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       6.497  -7.552   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       5.747  -6.207   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       6.537  -4.885   0.000  0.00  0.00           C+0
HETATM   11  O   UNK     0       5.788  -3.540   0.000  0.00  0.00           O+0
HETATM   12  C   UNK     0       8.077  -4.908   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       8.867  -3.587   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      10.407  -3.610   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      11.157  -4.955   0.000  0.00  0.00           C+0
HETATM   16  O   UNK     0      12.658  -5.298   0.000  0.00  0.00           O+0
HETATM   17  C   UNK     0      12.796  -6.832   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      11.379  -7.437   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      10.366  -6.277   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       8.827  -6.254   0.000  0.00  0.00           C+0
HETATM   21  O   UNK     0       8.036  -7.575   0.000  0.00  0.00           O+0
HETATM   22  C   UNK     0      14.117  -7.622   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      15.439  -8.413   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      13.327  -8.944   0.000  0.00  0.00           C+0
HETATM   25  O   UNK     0      14.908  -6.301   0.000  0.00  0.00           O+0
HETATM   26  C   UNK     0       4.207  -6.183   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       3.458  -4.838   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0       1.918  -4.815   0.000  0.00  0.00           C+0
HETATM   29  O   UNK     0       1.168  -3.470   0.000  0.00  0.00           O+0
HETATM   30  C   UNK     0      -0.372  -3.446   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4   28                                                  
CONECT    4    3    5                                                       
CONECT    5    4    6   26                                                  
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9   21                                                  
CONECT    9    8   10   26                                                  
CONECT   10    9   11   12                                                  
CONECT   11   10                                                            
CONECT   12   10   13   20                                                  
CONECT   13   12   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   16   19                                                  
CONECT   16   15   17                                                       
CONECT   17   16   18   22                                                  
CONECT   18   17   19                                                       
CONECT   19   18   15   20                                                  
CONECT   20   19   12   21                                                  
CONECT   21   20    8                                                       
CONECT   22   17   23   24   25                                             
CONECT   23   22                                                            
CONECT   24   22                                                            
CONECT   25   22                                                            
CONECT   26    9    5   27                                                  
CONECT   27   26   28                                                       
CONECT   28   27    3   29                                                  
CONECT   29   28   30                                                       
CONECT   30   29                                                            
MASTER        0    0    0    0    0    0    0    0   30    0   68    0
END

Download
3D PDB for NP0323954 (dehydrodalpanol)
Download
SMILES for NP0323954 (dehydrodalpanol)
COC1=CC2=C(C=C1OC)C1=C(CO2)OC2=C3CC(OC3=CC=C2C1=O)C(C)(C)O
Download
INCHI for NP0323954 (dehydrodalpanol)
InChI=1S/C23H22O7/c1-23(2,25)19-8-13-14(29-19)6-5-11-21(24)20-12-7-16(26-3)17(27-4)9-15(12)28-10-18(20)30-22(11)13/h5-7,9,19,25H,8,10H2,1-4H3
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View in JSmol
SynonymsNot Available
Chemical FormulaC23H22O7
Average Mass410.4220 Da
Monoisotopic Mass410.13655 Da
IUPAC Name6-(2-hydroxypropan-2-yl)-16,17-dimethoxy-2,7,20-trioxapentacyclo[11.8.0.0³,¹¹.0⁴,⁸.0¹⁴,¹⁹]henicosa-1(13),3,8,10,14(19),15,17-heptaen-12-one
Traditional Namedehydrodalpanol
CAS Registry NumberNot Available
SMILES
COC1=CC2=C(C=C1OC)C1=C(CO2)OC2=C3CC(OC3=CC=C2C1=O)C(C)(C)O
InChI Identifier
InChI=1S/C23H22O7/c1-23(2,25)19-8-13-14(29-19)6-5-11-21(24)20-12-7-16(26-3)17(27-4)9-15(12)28-10-18(20)30-22(11)13/h5-7,9,19,25H,8,10H2,1-4H3
InChI KeyXEYKGWOEWOJOKM-UHFFFAOYSA-N
Experimental Spectra
Not Available
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Amorpha fruticosaLOTUS Database
Dalbergia lanceolariaLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as rotenones. These are rotenoids with a structure based on a 6a,12a-dihydrochromeno[3,4-b]chromen-12(6H)-one skeleton.
KingdomOrganic compounds  
Super ClassPhenylpropanoids and polyketides  
ClassIsoflavonoids  
Sub ClassRotenoids  
Direct ParentRotenones  
Alternative Parents
Substituents
  • Rotenone or derivatives
    • 

  • Isoflavone
    • 

  • Chromone
    • 

  • Benzopyran
    • 

  • 1-benzopyran
    • 

  • Coumaran
    • 

  • Anisole
    • 

  • Phenol ether
    • 

  • Alkyl aryl ether
    • 

  • Pyranone
    • 

  • Benzenoid
    • 

  • Pyran
    • 

  • Heteroaromatic compound
    • 

  • Tertiary alcohol
    • 

  • Organoheterocyclic compound
    • 

  • Oxacycle
    • 

  • Ether
    • 

  • Alcohol
    • 

  • Organooxygen compound
    • 

  • Hydrocarbon derivative
    • 

  • Organic oxide
    • 

  • Organic oxygen compound
    • 

  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External Descriptors
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP2.59ALOGPS
logP2.49ChemAxon
logS-4.3ALOGPS
pKa (Strongest Acidic)14.3ChemAxon
pKa (Strongest Basic)-3.1ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count7ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area83.45 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity109.02 m³·mol⁻¹ChemAxon
Polarizability44.06 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound14779774  
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. LOTUS database [Link]