NP-MRD: Showing NP-Card for (2e)-3-[(1s,3s,4r,5r,8r,9r,12s,13s)-5-hydroxy-5,9,12-trimethyl-10-oxo-3-(2-oxopropyl)-2,11-dioxatricyclo[6.4.1.0⁴,¹³]tridecan-12-yl]prop-2-enal (NP0323078)

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Record Information

Version

2.0

Created at

2022-09-12 02:16:51 UTC

Updated at

2022-09-12 02:16:51 UTC

NP-MRD ID

NP0323078

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(2e)-3-[(1s,3s,4r,5r,8r,9r,12s,13s)-5-hydroxy-5,9,12-trimethyl-10-oxo-3-(2-oxopropyl)-2,11-dioxatricyclo[6.4.1.0⁴,¹³]tridecan-12-yl]prop-2-enal

Description

(2E)-3-[(1S,3S,4R,5R,8R,9R,12S,13S)-5-hydroxy-5,9,12-trimethyl-10-oxo-3-(2-oxopropyl)-2,11-dioxatricyclo[6.4.1.0⁴,¹³]Tridecan-12-yl]prop-2-enal belongs to the class of organic compounds known as lactones. These are cyclic esters of hydroxy carboxylic acids, containing a 1-oxacycloalkan-2-one structure, or analogues having unsaturation or heteroatoms replacing one or more carbon atoms of the ring. (2e)-3-[(1s,3s,4r,5r,8r,9r,12s,13s)-5-hydroxy-5,9,12-trimethyl-10-oxo-3-(2-oxopropyl)-2,11-dioxatricyclo[6.4.1.0⁴,¹³]tridecan-12-yl]prop-2-enal is found in Briareum asbestinum. Based on a literature review very few articles have been published on (2E)-3-[(1S,3S,4R,5R,8R,9R,12S,13S)-5-hydroxy-5,9,12-trimethyl-10-oxo-3-(2-oxopropyl)-2,11-dioxatricyclo[6.4.1.0⁴,¹³]Tridecan-12-yl]prop-2-enal.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309122204162D          

 26 28  0  0  1  0            999 V2000
   -0.0618    3.9112    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4700    3.2805    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1896    2.5046    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2821    3.4256    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8139    2.7948    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.6367    2.8543    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9476    2.0901    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.3168    1.5583    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.3393    0.7336    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.5624    0.3448    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8617    0.7803    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8886    1.6049    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.0719    1.4882    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6319    2.3889    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.6162    1.9939    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.9981    0.2370    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.8364   -0.5720    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7971    0.4424    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3288   -0.1883    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.1346    1.1952    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7566    1.9285    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.4981    2.2900    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9000    2.7409    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6753    3.0229    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8187    3.8354    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1868    4.3658    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  2  4  1  0  0  0  0
  5  4  1  6  0  0  0
  5  6  1  0  0  0  0
  7  6  1  6  0  0  0
  8  7  1  1  0  0  0
  8  9  1  0  0  0  0
  9 10  1  6  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  6  0  0  0
 12 14  1  1  0  0  0
 12 15  1  0  0  0  0
 15  5  1  1  0  0  0
  8 15  1  0  0  0  0
  9 16  1  0  0  0  0
 16 17  1  6  0  0  0
 16 18  1  0  0  0  0
 18 19  2  0  0  0  0
 18 20  1  0  0  0  0
 20 21  1  0  0  0  0
  7 21  1  0  0  0  0
 21 22  1  1  0  0  0
 21 23  1  6  0  0  0
 23 24  2  0  0  0  0
 24 25  1  0  0  0  0
 25 26  2  0  0  0  0
M  END

     RDKit          3D

 54 56  0  0  0  0  0  0  0  0999 V2000
    4.4614    3.3665    0.3710 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2261    2.6588   -0.0761 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5327    3.1367   -0.9487 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8487    1.3670    0.5516 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5972    0.8738   -0.0602 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.4951    1.7018    0.1620 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4799    0.9608   -0.4877 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.3133   -0.4713    0.0397 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.5597   -1.4478   -1.0541 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.1473   -2.8207   -0.5687 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2349   -2.8889   -0.0450 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9382   -1.6009    0.1200 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.0044   -1.7733    1.1993 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6230   -1.2835   -1.0667 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1032   -0.4361    0.4907 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.9638   -1.5369   -1.5201 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.9111   -2.1018   -0.4858 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5544   -0.3135   -2.0599 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0670   -0.3269   -3.2149 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6262    0.9221   -1.4310 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8612    1.4594   -0.3501 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.9023    2.9667   -0.3933 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5075    1.0594    0.9494 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8246    0.9393    0.9670 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5185    0.5524    2.2011 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7586    0.4308    2.2501 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2390    4.0955    1.1765 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1625    2.5898    0.7324 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9032    3.9070   -0.4949 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6622    0.6447    0.2810 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8262    1.4400    1.6561 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7553    0.7850   -1.1560 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2071    0.9402   -1.5660 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0311   -0.6651    0.8655 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0743   -1.1801   -1.9356 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3579   -3.5660   -1.3719 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8511   -3.0801    0.2620 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8403   -3.5219   -0.7596 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2794   -3.4678    0.9239 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0273   -1.7946    0.7659 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8494   -2.7339    1.7522 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9458   -0.9717    1.9650 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4480   -1.8576   -1.0967 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0887   -0.3128    1.6135 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9741   -2.2909   -2.3641 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9915   -3.2138   -0.5616 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9591   -1.7331   -0.6909 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6866   -1.8059    0.5403 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1152    3.3671   -1.0434 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7625    3.3652    0.6354 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9048    3.3170   -0.7198 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9481    0.8720    1.8441 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4268    1.1173    0.0933 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9552    0.3606    3.1137 H   0  0  0  0  0  0  0  0  0  0  0  0
 17 16  1  0
 16  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 12 14  1  6
 12 15  1  0
 15  5  1  0
  5  4  1  0
  4  2  1  0
  2  1  1  0
  2  3  2  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  7 21  1  0
 21 22  1  0
 21 20  1  0
 20 18  1  0
 18 19  2  0
 21 23  1  1
 23 24  2  0
 24 25  1  0
 25 26  2  0
 18 16  1  0
  8  9  1  0
  8 15  1  0
 17 46  1  0
 17 47  1  0
 17 48  1  0
 16 45  1  6
  9 35  1  6
 10 36  1  0
 10 37  1  0
 11 38  1  0
 11 39  1  0
 13 40  1  0
 13 41  1  0
 13 42  1  0
 14 43  1  0
 15 44  1  1
  5 32  1  6
  4 30  1  0
  4 31  1  0
  1 27  1  0
  1 28  1  0
  1 29  1  0
  7 33  1  6
  8 34  1  1
 22 49  1  0
 22 50  1  0
 22 51  1  0
 23 52  1  0
 24 53  1  0
 25 54  1  0
M  END


  Mrv1652309122204162D          

 26 28  0  0  1  0            999 V2000
   -0.0618    3.9112    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4700    3.2805    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1896    2.5046    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2821    3.4256    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8139    2.7948    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.6367    2.8543    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9476    2.0901    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.3168    1.5583    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.3393    0.7336    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.5624    0.3448    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8617    0.7803    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8886    1.6049    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.0719    1.4882    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6319    2.3889    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.6162    1.9939    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.9981    0.2370    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.8364   -0.5720    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7971    0.4424    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3288   -0.1883    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.1346    1.1952    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7566    1.9285    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.4981    2.2900    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9000    2.7409    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6753    3.0229    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8187    3.8354    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1868    4.3658    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  2  4  1  0  0  0  0
  5  4  1  6  0  0  0
  5  6  1  0  0  0  0
  7  6  1  6  0  0  0
  8  7  1  1  0  0  0
  8  9  1  0  0  0  0
  9 10  1  6  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  6  0  0  0
 12 14  1  1  0  0  0
 12 15  1  0  0  0  0
 15  5  1  1  0  0  0
  8 15  1  0  0  0  0
  9 16  1  0  0  0  0
 16 17  1  6  0  0  0
 16 18  1  0  0  0  0
 18 19  2  0  0  0  0
 18 20  1  0  0  0  0
 20 21  1  0  0  0  0
  7 21  1  0  0  0  0
 21 22  1  1  0  0  0
 21 23  1  6  0  0  0
 23 24  2  0  0  0  0
 24 25  1  0  0  0  0
 25 26  2  0  0  0  0
M  END
> <DATABASE_ID>
NP0323078

> <DATABASE_NAME>
NP-MRD

> <SMILES>
C[C@@H]1[C@@H]2CC[C@@](C)(O)[C@H]3[C@H](CC(C)=O)O[C@@H]([C@@H]23)[C@@](C)(OC1=O)\C=C\C=O

> <INCHI_IDENTIFIER>
InChI=1S/C20H28O6/c1-11(22)10-14-16-15-13(6-8-19(16,3)24)12(2)18(23)26-20(4,7-5-9-21)17(15)25-14/h5,7,9,12-17,24H,6,8,10H2,1-4H3/b7-5+/t12-,13+,14+,15+,16+,17+,19-,20+/m1/s1

> <INCHI_KEY>
JXXLIZMZSBYZGB-HOTWEPRVSA-N

> <FORMULA>
C20H28O6

> <MOLECULAR_WEIGHT>
364.438

> <EXACT_MASS>
364.188588622

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
54

> <JCHEM_AVERAGE_POLARIZABILITY>
38.3328828928576

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(2E)-3-[(1S,3S,4R,5R,8R,9R,12S,13S)-5-hydroxy-5,9,12-trimethyl-10-oxo-3-(2-oxopropyl)-2,11-dioxatricyclo[6.4.1.0^{4,13}]tridecan-12-yl]prop-2-enal

> <JCHEM_LOGP>
1.0530916300000002

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
18.007330370706647

> <JCHEM_PKA_STRONGEST_ACIDIC>
14.693270983014138

> <JCHEM_PKA_STRONGEST_BASIC>
-2.9327539892864447

> <JCHEM_POLAR_SURFACE_AREA>
89.9

> <JCHEM_REFRACTIVITY>
94.83179999999999

> <JCHEM_ROTATABLE_BOND_COUNT>
4

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
(2E)-3-[(1S,3S,4R,5R,8R,9R,12S,13S)-5-hydroxy-5,9,12-trimethyl-10-oxo-3-(2-oxopropyl)-2,11-dioxatricyclo[6.4.1.0^{4,13}]tridecan-12-yl]prop-2-enal

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 12-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   12-SEP-22         0                                  
HETATM    1  C   UNK     0      -0.115   7.301   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       0.877   6.124   0.000  0.00  0.00           C+0
HETATM    3  O   UNK     0       0.354   4.675   0.000  0.00  0.00           O+0
HETATM    4  C   UNK     0       2.393   6.394   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       3.386   5.217   0.000  0.00  0.00           C+0
HETATM    6  O   UNK     0       4.922   5.328   0.000  0.00  0.00           O+0
HETATM    7  C   UNK     0       5.502   3.901   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       4.325   2.909   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       4.367   1.369   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       2.916   0.644   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       1.609   1.457   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       1.659   2.996   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       0.134   2.778   0.000  0.00  0.00           C+0
HETATM   14  O   UNK     0       1.179   4.459   0.000  0.00  0.00           O+0
HETATM   15  C   UNK     0       3.017   3.722   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       5.596   0.442   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       5.295  -1.068   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       7.088   0.826   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0       8.080  -0.352   0.000  0.00  0.00           O+0
HETATM   20  O   UNK     0       7.718   2.231   0.000  0.00  0.00           O+0
HETATM   21  C   UNK     0       7.012   3.600   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       8.397   4.275   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       7.280   5.116   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       8.727   5.643   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       8.995   7.159   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0       7.815   8.149   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3    4                                                  
CONECT    3    2                                                            
CONECT    4    2    5                                                       
CONECT    5    4    6   15                                                  
CONECT    6    5    7                                                       
CONECT    7    6    8   21                                                  
CONECT    8    7    9   15                                                  
CONECT    9    8   10   16                                                  
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13   14   15                                             
CONECT   13   12                                                            
CONECT   14   12                                                            
CONECT   15   12    5    8                                                  
CONECT   16    9   17   18                                                  
CONECT   17   16                                                            
CONECT   18   16   19   20                                                  
CONECT   19   18                                                            
CONECT   20   18   21                                                       
CONECT   21   20    7   22   23                                             
CONECT   22   21                                                            
CONECT   23   21   24                                                       
CONECT   24   23   25                                                       
CONECT   25   24   26                                                       
CONECT   26   25                                                            
MASTER        0    0    0    0    0    0    0    0   26    0   56    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₀H₂₈O₆

Average Mass

364.4380 Da

Monoisotopic Mass

364.18859 Da

IUPAC Name

(2E)-3-[(1S,3S,4R,5R,8R,9R,12S,13S)-5-hydroxy-5,9,12-trimethyl-10-oxo-3-(2-oxopropyl)-2,11-dioxatricyclo[6.4.1.0^{4,13}]tridecan-12-yl]prop-2-enal

Traditional Name

(2E)-3-[(1S,3S,4R,5R,8R,9R,12S,13S)-5-hydroxy-5,9,12-trimethyl-10-oxo-3-(2-oxopropyl)-2,11-dioxatricyclo[6.4.1.0^{4,13}]tridecan-12-yl]prop-2-enal

CAS Registry Number

Not Available

SMILES

C[C@@H]1[C@@H]2CC[C@@](C)(O)[C@H]3[C@H](CC(C)=O)O[C@@H]([C@@H]23)[C@@](C)(OC1=O)\C=C\C=O

InChI Identifier

InChI=1S/C20H28O6/c1-11(22)10-14-16-15-13(6-8-19(16,3)24)12(2)18(23)26-20(4,7-5-9-21)17(15)25-14/h5,7,9,12-17,24H,6,8,10H2,1-4H3/b7-5+/t12-,13+,14+,15+,16+,17+,19-,20+/m1/s1

InChI Key

JXXLIZMZSBYZGB-HOTWEPRVSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Briareum asbestinum	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as lactones. These are cyclic esters of hydroxy carboxylic acids, containing a 1-oxacycloalkan-2-one structure, or analogues having unsaturation or heteroatoms replacing one or more carbon atoms of the ring.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Lactones

Sub Class

Not Available

Direct Parent

Lactones

Alternative Parents

Substituents

Caprolactone
Oxepane
Alpha,beta-unsaturated aldehyde
Cyclic alcohol
Tetrahydrofuran
Tertiary alcohol
Enal
Carboxylic acid ester
Ketone
Lactone
Carboxylic acid derivative
Oxacycle
Dialkyl ether
Ether
Monocarboxylic acid or derivatives
Hydrocarbon derivative
Alcohol
Carbonyl group
Aldehyde
Organooxygen compound
Organic oxygen compound
Organic oxide
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.05	ChemAxon
pKa (Strongest Acidic)	14.69	ChemAxon
pKa (Strongest Basic)	-2.9	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	89.9 Å²	ChemAxon
Rotatable Bond Count	4	ChemAxon
Refractivity	94.83 m³·mol⁻¹	ChemAxon
Polarizability	38.33 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

10286721

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

21674248

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (2e)-3-[(1s,3s,4r,5r,8r,9r,12s,13s)-5-hydroxy-5,9,12-trimethyl-10-oxo-3-(2-oxopropyl)-2,11-dioxatricyclo[6.4.1.0⁴,¹³]tridecan-12-yl]prop-2-enal (NP0323078)

MOL for NP0323078 ((2e)-3-[(1s,3s,4r,5r,8r,9r,12s,13s)-5-hydroxy-5,9,12-trimethyl-10-oxo-3-(2-oxopropyl)-2,11-dioxatricyclo[6.4.1.0⁴,¹³]tridecan-12-yl]prop-2-enal)

3D MOL for NP0323078 ((2e)-3-[(1s,3s,4r,5r,8r,9r,12s,13s)-5-hydroxy-5,9,12-trimethyl-10-oxo-3-(2-oxopropyl)-2,11-dioxatricyclo[6.4.1.0⁴,¹³]tridecan-12-yl]prop-2-enal)

3D SDF for NP0323078 ((2e)-3-[(1s,3s,4r,5r,8r,9r,12s,13s)-5-hydroxy-5,9,12-trimethyl-10-oxo-3-(2-oxopropyl)-2,11-dioxatricyclo[6.4.1.0⁴,¹³]tridecan-12-yl]prop-2-enal)

3D-SDF for NP0323078 ((2e)-3-[(1s,3s,4r,5r,8r,9r,12s,13s)-5-hydroxy-5,9,12-trimethyl-10-oxo-3-(2-oxopropyl)-2,11-dioxatricyclo[6.4.1.0⁴,¹³]tridecan-12-yl]prop-2-enal)

PDB for NP0323078 ((2e)-3-[(1s,3s,4r,5r,8r,9r,12s,13s)-5-hydroxy-5,9,12-trimethyl-10-oxo-3-(2-oxopropyl)-2,11-dioxatricyclo[6.4.1.0⁴,¹³]tridecan-12-yl]prop-2-enal)

3D PDB for NP0323078 ((2e)-3-[(1s,3s,4r,5r,8r,9r,12s,13s)-5-hydroxy-5,9,12-trimethyl-10-oxo-3-(2-oxopropyl)-2,11-dioxatricyclo[6.4.1.0⁴,¹³]tridecan-12-yl]prop-2-enal)

SMILES for NP0323078 ((2e)-3-[(1s,3s,4r,5r,8r,9r,12s,13s)-5-hydroxy-5,9,12-trimethyl-10-oxo-3-(2-oxopropyl)-2,11-dioxatricyclo[6.4.1.0⁴,¹³]tridecan-12-yl]prop-2-enal)

INCHI for NP0323078 ((2e)-3-[(1s,3s,4r,5r,8r,9r,12s,13s)-5-hydroxy-5,9,12-trimethyl-10-oxo-3-(2-oxopropyl)-2,11-dioxatricyclo[6.4.1.0⁴,¹³]tridecan-12-yl]prop-2-enal)

Structure for NP0323078 ((2e)-3-[(1s,3s,4r,5r,8r,9r,12s,13s)-5-hydroxy-5,9,12-trimethyl-10-oxo-3-(2-oxopropyl)-2,11-dioxatricyclo[6.4.1.0⁴,¹³]tridecan-12-yl]prop-2-enal)

3D Structure for NP0323078 ((2e)-3-[(1s,3s,4r,5r,8r,9r,12s,13s)-5-hydroxy-5,9,12-trimethyl-10-oxo-3-(2-oxopropyl)-2,11-dioxatricyclo[6.4.1.0⁴,¹³]tridecan-12-yl]prop-2-enal)