NP-MRD: Showing NP-Card for (1s,2r,7r,9r,11r)-1,2,5-trimethyl-12-methylidene-8-oxatricyclo[7.2.1.0²,⁷]dodec-5-en-11-yl (2z,4e)-5-[(2r,3r)-3-methyloxiran-2-yl]penta-2,4-dienoate (NP0321753)

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Record Information

Version

2.0

Created at

2022-09-12 00:07:51 UTC

Updated at

2022-09-12 00:07:51 UTC

NP-MRD ID

NP0321753

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(1s,2r,7r,9r,11r)-1,2,5-trimethyl-12-methylidene-8-oxatricyclo[7.2.1.0²,⁷]dodec-5-en-11-yl (2z,4e)-5-[(2r,3r)-3-methyloxiran-2-yl]penta-2,4-dienoate

Description

12,13-Deoxytrichodermadiene belongs to the class of organic compounds known as oxepanes. Oxepanes are compounds containing an oxepane ring, which is a seven-member saturated aliphatic heterocycle with one oxygen and six carbon atoms. (1s,2r,7r,9r,11r)-1,2,5-trimethyl-12-methylidene-8-oxatricyclo[7.2.1.0²,⁷]dodec-5-en-11-yl (2z,4e)-5-[(2r,3r)-3-methyloxiran-2-yl]penta-2,4-dienoate is found in Albifimbria verrucaria. Based on a literature review very few articles have been published on 12,13-Deoxytrichodermadiene.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309122202072D          

 27 30  0  0  1  0            999 V2000
    2.1043    1.2782    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7514    1.7900    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2908    1.0015    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.7168    1.7080    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4300    2.4816    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.0026    3.0756    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.8033    2.8768    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0314    2.0839    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.3758    3.4708    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1476    4.2636    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3469    4.4624    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1187    5.2552    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3181    5.4540    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.5252    5.2259    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7241    6.0265    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.4959    6.8194    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6465    2.7396    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.5390    3.5576    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9561    2.2879    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.9718    3.1128    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2834    2.7655    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5334    2.4217    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4562    1.6004    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2938    1.2566    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1289    1.1228    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8789    1.4666    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.4729    0.8940    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  3  2  1  6  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  6  0  0  0
  6  7  1  0  0  0  0
  7  8  2  0  0  0  0
  7  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
 13 12  1  1  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 13 15  1  0  0  0  0
 15 16  1  6  0  0  0
  5 17  1  0  0  0  0
  2 17  1  0  0  0  0
 17 18  1  6  0  0  0
 17 19  1  0  0  0  0
 19 20  1  1  0  0  0
 19 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 23 25  2  0  0  0  0
 25 26  1  0  0  0  0
 19 26  1  0  0  0  0
 26 27  1  6  0  0  0
  3 27  1  0  0  0  0
M  END

     RDKit          3D

 57 60  0  0  0  0  0  0  0  0999 V2000
   -2.2813    0.6596   -2.4320 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0128   -0.3040   -1.6000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0554   -1.7739   -1.8113 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.9213   -2.3269   -0.9366 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3813   -1.1079   -0.2517 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.5277   -0.3918   -1.1033 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8270   -0.0759   -0.7229 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1181   -0.4722    0.4137 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.6238    0.6452   -1.6768 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8687    1.0394   -1.5181 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5869    0.7716   -0.3122 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8476    1.2041   -0.2264 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6005    0.9314    1.0200 C   0  0  1  0  0  0  0  0  0  0  0  0
    6.7663   -0.4165    1.3979 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.9032    0.2247    0.8410 C   0  0  2  0  0  0  0  0  0  0  0  0
    9.0153    0.5893    1.7836 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5805   -0.1917   -0.1779 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.1141    1.1386    0.2469 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7494   -0.7354    0.5956 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.3869   -1.6587    1.7272 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4264    0.4558    1.2336 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9564    0.3041    1.2644 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3439    0.3292   -0.1626 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3343    1.2678   -0.6769 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7341   -0.5358   -0.9431 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7509   -1.4259   -0.2645 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.2249   -2.2421   -1.2396 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5937    0.5101   -3.4620 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1999    1.6887   -2.1144 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9441   -2.0730   -2.8545 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1761   -2.8730   -1.5369 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2850   -3.0240   -0.1600 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1527   -1.2891    0.6633 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1967    0.9245   -2.6641 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3516    1.5903   -2.3525 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1598    0.2469    0.5100 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.3095    1.7341   -1.0313 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.5040    1.6658    1.8370 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.1643   -0.1746   -0.1536 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.7327    1.2298    1.2605 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.5783    1.1279    2.6431 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.5479   -0.3330    2.1406 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0239    1.2205    0.2054 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3674    1.2432    1.3456 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5586    2.0210   -0.2333 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3325   -1.8144    1.9074 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8075   -1.3205    2.7224 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8638   -2.6678    1.5960 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2720    1.3800    0.6300 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0971    0.5921    2.2844 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3427    1.1422    1.8488 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1416   -0.6940    1.7194 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4310    1.2658   -1.7761 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0242    2.3200   -0.4137 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3383    1.1399   -0.2228 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9493   -0.5817   -2.0158 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3802   -2.0998    0.3921 H   0  0  0  0  0  0  0  0  0  0  0  0
 16 15  1  0
 15 14  1  0
 14 13  1  0
 13 12  1  0
 12 11  2  0
 11 10  1  0
 10  9  2  0
  9  7  1  0
  7  8  2  0
  7  6  1  0
  6  5  1  0
  5  4  1  0
  4  3  1  0
  3 27  1  0
 27 26  1  0
 26 25  1  0
 25 23  2  0
 23 24  1  0
 23 22  1  0
 22 21  1  0
 21 19  1  0
 19 20  1  1
 19 17  1  0
 17 18  1  1
 17  2  1  0
  2  1  2  3
 13 15  1  0
 17  5  1  0
  2  3  1  0
 19 26  1  0
 16 40  1  0
 16 41  1  0
 16 42  1  0
 15 39  1  6
 13 38  1  1
 12 37  1  0
 11 36  1  0
 10 35  1  0
  9 34  1  0
  5 33  1  1
  4 31  1  0
  4 32  1  0
  3 30  1  6
 26 57  1  1
 25 56  1  0
 24 53  1  0
 24 54  1  0
 24 55  1  0
 22 51  1  0
 22 52  1  0
 21 49  1  0
 21 50  1  0
 20 46  1  0
 20 47  1  0
 20 48  1  0
 18 43  1  0
 18 44  1  0
 18 45  1  0
  1 28  1  0
  1 29  1  0
M  END


  Mrv1652309122202072D          

 27 30  0  0  1  0            999 V2000
    2.1043    1.2782    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7514    1.7900    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2908    1.0015    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.7168    1.7080    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4300    2.4816    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.0026    3.0756    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.8033    2.8768    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0314    2.0839    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.3758    3.4708    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1476    4.2636    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3469    4.4624    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1187    5.2552    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3181    5.4540    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.5252    5.2259    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7241    6.0265    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.4959    6.8194    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6465    2.7396    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.5390    3.5576    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9561    2.2879    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.9718    3.1128    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2834    2.7655    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5334    2.4217    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4562    1.6004    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2938    1.2566    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1289    1.1228    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8789    1.4666    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.4729    0.8940    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  3  2  1  6  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  6  0  0  0
  6  7  1  0  0  0  0
  7  8  2  0  0  0  0
  7  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
 13 12  1  1  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 13 15  1  0  0  0  0
 15 16  1  6  0  0  0
  5 17  1  0  0  0  0
  2 17  1  0  0  0  0
 17 18  1  6  0  0  0
 17 19  1  0  0  0  0
 19 20  1  1  0  0  0
 19 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 23 25  2  0  0  0  0
 25 26  1  0  0  0  0
 19 26  1  0  0  0  0
 26 27  1  6  0  0  0
  3 27  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0321753

> <DATABASE_NAME>
NP-MRD

> <SMILES>
C[C@H]1O[C@@H]1\C=C\C=C/C(=O)O[C@@H]1C[C@H]2O[C@@H]3C=C(C)CC[C@]3(C)[C@]1(C)C2=C

> <INCHI_IDENTIFIER>
InChI=1S/C23H30O4/c1-14-10-11-22(4)19(12-14)26-18-13-20(23(22,5)15(18)2)27-21(24)9-7-6-8-17-16(3)25-17/h6-9,12,16-20H,2,10-11,13H2,1,3-5H3/b8-6+,9-7-/t16-,17-,18-,19-,20-,22+,23-/m1/s1

> <INCHI_KEY>
XGEYKPJYISPKED-YSLZVJMJSA-N

> <FORMULA>
C23H30O4

> <MOLECULAR_WEIGHT>
370.489

> <EXACT_MASS>
370.214409446

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_ATOM_COUNT>
57

> <JCHEM_AVERAGE_POLARIZABILITY>
40.841612050281164

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1S,2R,7R,9R,11R)-1,2,5-trimethyl-12-methylidene-8-oxatricyclo[7.2.1.0^{2,7}]dodec-5-en-11-yl (2Z,4E)-5-[(2R,3R)-3-methyloxiran-2-yl]penta-2,4-dienoate

> <JCHEM_LOGP>
4.096496157666666

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_BASIC>
-3.9276286694935805

> <JCHEM_POLAR_SURFACE_AREA>
48.06

> <JCHEM_REFRACTIVITY>
106.65489999999996

> <JCHEM_ROTATABLE_BOND_COUNT>
5

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
(1S,2R,7R,9R,11R)-1,2,5-trimethyl-12-methylidene-8-oxatricyclo[7.2.1.0^{2,7}]dodec-5-en-11-yl (2Z,4E)-5-[(2R,3R)-3-methyloxiran-2-yl]penta-2,4-dienoate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 12-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   12-SEP-22         0                                  
HETATM    1  C   UNK     0       3.928   2.386   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       5.136   3.341   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       6.143   1.869   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       6.938   3.188   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       6.403   4.632   0.000  0.00  0.00           C+0
HETATM    6  O   UNK     0       7.471   5.741   0.000  0.00  0.00           O+0
HETATM    7  C   UNK     0       8.966   5.370   0.000  0.00  0.00           C+0
HETATM    8  O   UNK     0       9.392   3.890   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0      10.035   6.479   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       9.609   7.959   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       8.114   8.330   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       7.688   9.810   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       6.194  10.181   0.000  0.00  0.00           C+0
HETATM   14  O   UNK     0       4.714   9.755   0.000  0.00  0.00           O+0
HETATM   15  C   UNK     0       5.085  11.250   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       4.659  12.729   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       4.940   5.114   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       4.739   6.641   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       3.651   4.271   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       3.681   5.811   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       2.396   5.162   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       0.996   4.521   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       0.852   2.987   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      -0.548   2.346   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       2.107   2.096   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       3.507   2.738   0.000  0.00  0.00           C+0
HETATM   27  O   UNK     0       4.616   1.669   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3   17                                                  
CONECT    3    2    4   27                                                  
CONECT    4    3    5                                                       
CONECT    5    4    6   17                                                  
CONECT    6    5    7                                                       
CONECT    7    6    8    9                                                  
CONECT    8    7                                                            
CONECT    9    7   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14   15                                                  
CONECT   14   13   15                                                       
CONECT   15   14   13   16                                                  
CONECT   16   15                                                            
CONECT   17    5    2   18   19                                             
CONECT   18   17                                                            
CONECT   19   17   20   21   26                                             
CONECT   20   19                                                            
CONECT   21   19   22                                                       
CONECT   22   21   23                                                       
CONECT   23   22   24   25                                                  
CONECT   24   23                                                            
CONECT   25   23   26                                                       
CONECT   26   25   19   27                                                  
CONECT   27   26    3                                                       
MASTER        0    0    0    0    0    0    0    0   27    0   60    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₃H₃₀O₄

Average Mass

370.4890 Da

Monoisotopic Mass

370.21441 Da

IUPAC Name

(1S,2R,7R,9R,11R)-1,2,5-trimethyl-12-methylidene-8-oxatricyclo[7.2.1.0^{2,7}]dodec-5-en-11-yl (2Z,4E)-5-[(2R,3R)-3-methyloxiran-2-yl]penta-2,4-dienoate

Traditional Name

(1S,2R,7R,9R,11R)-1,2,5-trimethyl-12-methylidene-8-oxatricyclo[7.2.1.0^{2,7}]dodec-5-en-11-yl (2Z,4E)-5-[(2R,3R)-3-methyloxiran-2-yl]penta-2,4-dienoate

CAS Registry Number

Not Available

SMILES

C[C@H]1O[C@@H]1\C=C\C=C/C(=O)O[C@@H]1C[C@H]2O[C@@H]3C=C(C)CC[C@]3(C)[C@]1(C)C2=C

InChI Identifier

InChI=1S/C23H30O4/c1-14-10-11-22(4)19(12-14)26-18-13-20(23(22,5)15(18)2)27-21(24)9-7-6-8-17-16(3)25-17/h6-9,12,16-20H,2,10-11,13H2,1,3-5H3/b8-6+,9-7-/t16-,17-,18-,19-,20-,22+,23-/m1/s1

InChI Key

XGEYKPJYISPKED-YSLZVJMJSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Albifimbria verrucaria	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as oxepanes. Oxepanes are compounds containing an oxepane ring, which is a seven-member saturated aliphatic heterocycle with one oxygen and six carbon atoms.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Oxepanes

Sub Class

Not Available

Direct Parent

Oxepanes

Alternative Parents

Substituents

Fatty acid ester
Oxepane
Oxane
Fatty acyl
Alpha,beta-unsaturated carboxylic ester
Enoate ester
Carboxylic acid ester
Carboxylic acid derivative
Dialkyl ether
Oxirane
Ether
Monocarboxylic acid or derivatives
Oxacycle
Organic oxygen compound
Organic oxide
Carbonyl group
Organooxygen compound
Hydrocarbon derivative
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	4.1	ChemAxon
pKa (Strongest Basic)	-3.9	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	3	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	48.06 Å²	ChemAxon
Rotatable Bond Count	5	ChemAxon
Refractivity	106.65 m³·mol⁻¹	ChemAxon
Polarizability	40.84 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

78440332

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

139586762

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (1s,2r,7r,9r,11r)-1,2,5-trimethyl-12-methylidene-8-oxatricyclo[7.2.1.0²,⁷]dodec-5-en-11-yl (2z,4e)-5-[(2r,3r)-3-methyloxiran-2-yl]penta-2,4-dienoate (NP0321753)

MOL for NP0321753 ((1s,2r,7r,9r,11r)-1,2,5-trimethyl-12-methylidene-8-oxatricyclo[7.2.1.0²,⁷]dodec-5-en-11-yl (2z,4e)-5-[(2r,3r)-3-methyloxiran-2-yl]penta-2,4-dienoate)

3D MOL for NP0321753 ((1s,2r,7r,9r,11r)-1,2,5-trimethyl-12-methylidene-8-oxatricyclo[7.2.1.0²,⁷]dodec-5-en-11-yl (2z,4e)-5-[(2r,3r)-3-methyloxiran-2-yl]penta-2,4-dienoate)

3D SDF for NP0321753 ((1s,2r,7r,9r,11r)-1,2,5-trimethyl-12-methylidene-8-oxatricyclo[7.2.1.0²,⁷]dodec-5-en-11-yl (2z,4e)-5-[(2r,3r)-3-methyloxiran-2-yl]penta-2,4-dienoate)

3D-SDF for NP0321753 ((1s,2r,7r,9r,11r)-1,2,5-trimethyl-12-methylidene-8-oxatricyclo[7.2.1.0²,⁷]dodec-5-en-11-yl (2z,4e)-5-[(2r,3r)-3-methyloxiran-2-yl]penta-2,4-dienoate)

PDB for NP0321753 ((1s,2r,7r,9r,11r)-1,2,5-trimethyl-12-methylidene-8-oxatricyclo[7.2.1.0²,⁷]dodec-5-en-11-yl (2z,4e)-5-[(2r,3r)-3-methyloxiran-2-yl]penta-2,4-dienoate)

3D PDB for NP0321753 ((1s,2r,7r,9r,11r)-1,2,5-trimethyl-12-methylidene-8-oxatricyclo[7.2.1.0²,⁷]dodec-5-en-11-yl (2z,4e)-5-[(2r,3r)-3-methyloxiran-2-yl]penta-2,4-dienoate)

SMILES for NP0321753 ((1s,2r,7r,9r,11r)-1,2,5-trimethyl-12-methylidene-8-oxatricyclo[7.2.1.0²,⁷]dodec-5-en-11-yl (2z,4e)-5-[(2r,3r)-3-methyloxiran-2-yl]penta-2,4-dienoate)

INCHI for NP0321753 ((1s,2r,7r,9r,11r)-1,2,5-trimethyl-12-methylidene-8-oxatricyclo[7.2.1.0²,⁷]dodec-5-en-11-yl (2z,4e)-5-[(2r,3r)-3-methyloxiran-2-yl]penta-2,4-dienoate)

Structure for NP0321753 ((1s,2r,7r,9r,11r)-1,2,5-trimethyl-12-methylidene-8-oxatricyclo[7.2.1.0²,⁷]dodec-5-en-11-yl (2z,4e)-5-[(2r,3r)-3-methyloxiran-2-yl]penta-2,4-dienoate)

3D Structure for NP0321753 ((1s,2r,7r,9r,11r)-1,2,5-trimethyl-12-methylidene-8-oxatricyclo[7.2.1.0²,⁷]dodec-5-en-11-yl (2z,4e)-5-[(2r,3r)-3-methyloxiran-2-yl]penta-2,4-dienoate)