NP-MRD: Showing NP-Card for (2s,3r,4s,5s,6r)-2-{4-[(1e)-2-[(2r,3r)-3-(3,5-dihydroxyphenyl)-4-hydroxy-2-(2-hydroxy-4-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}phenyl)-2,3-dihydro-1-benzofuran-6-yl]ethenyl]phenoxy}-6-(hydroxymethyl)oxane-3,4,5-triol (NP0321486)

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Record Information

Version

2.0

Created at

2022-09-11 23:43:09 UTC

Updated at

2022-09-11 23:43:10 UTC

NP-MRD ID

NP0321486

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(2s,3r,4s,5s,6r)-2-{4-[(1e)-2-[(2r,3r)-3-(3,5-dihydroxyphenyl)-4-hydroxy-2-(2-hydroxy-4-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}phenyl)-2,3-dihydro-1-benzofuran-6-yl]ethenyl]phenoxy}-6-(hydroxymethyl)oxane-3,4,5-triol

Description

(2S,3R,4S,5S,6R)-2-{4-[(E)-2-[(2R,3R)-3-(3,5-dihydroxyphenyl)-4-hydroxy-2-(2-hydroxy-4-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}phenyl)-2,3-dihydro-1-benzofuran-6-yl]ethenyl]phenoxy}-6-(hydroxymethyl)oxane-3,4,5-triol belongs to the class of organic compounds known as 2-arylbenzofuran flavonoids. These are phenylpropanoids containing the 2-phenylbenzofuran moiety. (2s,3r,4s,5s,6r)-2-{4-[(1e)-2-[(2r,3r)-3-(3,5-dihydroxyphenyl)-4-hydroxy-2-(2-hydroxy-4-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}phenyl)-2,3-dihydro-1-benzofuran-6-yl]ethenyl]phenoxy}-6-(hydroxymethyl)oxane-3,4,5-triol is found in Gnetum africanum. Based on a literature review very few articles have been published on (2S,3R,4S,5S,6R)-2-{4-[(E)-2-[(2R,3R)-3-(3,5-dihydroxyphenyl)-4-hydroxy-2-(2-hydroxy-4-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}phenyl)-2,3-dihydro-1-benzofuran-6-yl]ethenyl]phenoxy}-6-(hydroxymethyl)oxane-3,4,5-triol.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309122201432D          

 57 63  0  0  1  0            999 V2000
    9.0681    6.8854    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.0681    6.0604    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.3536    5.6479    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    8.3536    4.8229    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.6391    4.4104    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    7.6391    3.5854    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.9246    3.1729    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.9246    2.3479    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2102    1.9354    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4957    2.3479    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7812    1.9354    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0668    2.3479    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3523    1.9354    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3523    1.1104    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6378    0.6979    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6378   -0.1271    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.9233    1.1104    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9233    1.9354    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6378    2.3479    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1387    2.1904    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6538    1.5229    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.1712    1.5229    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5837    0.8085    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -1.8212    1.5229    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6462    1.5229    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0587    2.2374    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.8837    2.2374    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2962    2.9519    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
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   -5.5337    2.2374    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
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   -2.6462    4.3808    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
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   -1.4087    2.2374    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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    1.1387    0.8555    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
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    1.4358   -0.5422    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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    1.7329   -1.9399    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.3739   -1.4984    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1781   -0.8853    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9851   -1.0568    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0768   -0.1006    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4957    3.1729    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2102    3.5854    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.9246    4.8229    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.2102    4.4104    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.9246    5.6479    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    6.2102    6.0604    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.6391    6.0604    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    7.6391    6.8854    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  3  2  1  1  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  1  0  0  0
  6  7  1  0  0  0  0
  7  8  2  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 15 17  2  0  0  0  0
 17 18  1  0  0  0  0
 18 19  2  0  0  0  0
 13 19  1  0  0  0  0
 18 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  6  0  0  0
 22 23  2  0  0  0  0
 23 24  1  0  0  0  0
 24 25  2  0  0  0  0
 25 26  1  0  0  0  0
 27 26  1  6  0  0  0
 27 28  1  0  0  0  0
 28 29  1  0  0  0  0
 29 30  1  6  0  0  0
 30 31  1  0  0  0  0
 29 32  1  0  0  0  0
 32 33  1  1  0  0  0
 32 34  1  0  0  0  0
 34 35  1  6  0  0  0
 34 36  1  0  0  0  0
 27 36  1  0  0  0  0
 36 37  1  1  0  0  0
 25 38  1  0  0  0  0
 38 39  2  0  0  0  0
 22 39  1  0  0  0  0
 39 40  1  0  0  0  0
 21 41  1  0  0  0  0
 17 41  1  0  0  0  0
 41 42  1  1  0  0  0
 42 43  2  0  0  0  0
 43 44  1  0  0  0  0
 44 45  1  0  0  0  0
 44 46  2  0  0  0  0
 46 47  1  0  0  0  0
 47 48  1  0  0  0  0
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 42 49  1  0  0  0  0
 10 50  1  0  0  0  0
 50 51  2  0  0  0  0
  7 51  1  0  0  0  0
  5 52  1  0  0  0  0
 52 53  1  6  0  0  0
 52 54  1  0  0  0  0
 54 55  1  1  0  0  0
 54 56  1  0  0  0  0
  3 56  1  0  0  0  0
 56 57  1  6  0  0  0
M  END

     RDKit          3D

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    6.9474    1.2671   -0.2757 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5975    1.0360   -0.3275 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1457   -0.2865   -0.3208 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7133   -0.4923   -0.3408 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -3.4969   -3.6763    1.4781 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0640   -4.8555    1.8996 C   0  0  0  0  0  0  0  0  0  0  0  0
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   11.8033    3.4375   -1.1994 H   0  0  0  0  0  0  0  0  0  0  0  0
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M  END


  Mrv1652309122201432D          

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  7  8  2  0  0  0  0
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  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
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 25 38  1  0  0  0  0
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 39 40  1  0  0  0  0
 21 41  1  0  0  0  0
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 44 46  2  0  0  0  0
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 10 50  1  0  0  0  0
 50 51  2  0  0  0  0
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  5 52  1  0  0  0  0
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 52 54  1  0  0  0  0
 54 55  1  1  0  0  0
 54 56  1  0  0  0  0
  3 56  1  0  0  0  0
 56 57  1  6  0  0  0
M  END
> <DATABASE_ID>
NP0321486

> <DATABASE_NAME>
NP-MRD

> <SMILES>
OC[C@H]1O[C@@H](OC2=CC=C(\C=C\C3=CC(O)=C4[C@H]([C@@H](OC4=C3)C3=CC=C(O[C@@H]4O[C@H](CO)[C@@H](O)[C@H](O)[C@H]4O)C=C3O)C3=CC(O)=CC(O)=C3)C=C2)[C@H](O)[C@@H](O)[C@@H]1O

> <INCHI_IDENTIFIER>
InChI=1S/C40H42O17/c41-15-28-32(47)34(49)36(51)39(56-28)53-22-5-3-17(4-6-22)1-2-18-9-26(46)31-27(10-18)55-38(30(31)19-11-20(43)13-21(44)12-19)24-8-7-23(14-25(24)45)54-40-37(52)35(50)33(48)29(16-42)57-40/h1-14,28-30,32-52H,15-16H2/b2-1+/t28-,29-,30-,32-,33-,34+,35+,36-,37-,38+,39-,40-/m1/s1

> <INCHI_KEY>
ZOKDLHVYZRCXFJ-NMEBUZTNSA-N

> <FORMULA>
C40H42O17

> <MOLECULAR_WEIGHT>
794.759

> <EXACT_MASS>
794.242199892

> <JCHEM_ACCEPTOR_COUNT>
17

> <JCHEM_ATOM_COUNT>
99

> <JCHEM_AVERAGE_POLARIZABILITY>
81.4109564173183

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
12

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2S,3R,4S,5S,6R)-2-{4-[(E)-2-[(2R,3R)-3-(3,5-dihydroxyphenyl)-4-hydroxy-2-(2-hydroxy-4-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}phenyl)-2,3-dihydro-1-benzofuran-6-yl]ethenyl]phenoxy}-6-(hydroxymethyl)oxane-3,4,5-triol

> <JCHEM_LOGP>
1.120792961666667

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
7

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
9.074598892392622

> <JCHEM_PKA_STRONGEST_ACIDIC>
8.589504852771377

> <JCHEM_PKA_STRONGEST_BASIC>
-3.6789465800483185

> <JCHEM_POLAR_SURFACE_AREA>
288.90999999999997

> <JCHEM_REFRACTIVITY>
196.3092

> <JCHEM_ROTATABLE_BOND_COUNT>
10

> <JCHEM_RULE_OF_FIVE>
0

> <JCHEM_TRADITIONAL_IUPAC>
(2S,3R,4S,5S,6R)-2-{4-[(E)-2-[(2R,3R)-3-(3,5-dihydroxyphenyl)-4-hydroxy-2-(2-hydroxy-4-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}phenyl)-2,3-dihydro-1-benzofuran-6-yl]ethenyl]phenoxy}-6-(hydroxymethyl)oxane-3,4,5-triol

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 12-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   12-SEP-22         0                                  
HETATM    1  O   UNK     0      16.927  12.853   0.000  0.00  0.00           O+0
HETATM    2  C   UNK     0      16.927  11.313   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      15.593  10.543   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0      15.593   9.003   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0      14.260   8.233   0.000  0.00  0.00           C+0
HETATM    6  O   UNK     0      14.260   6.693   0.000  0.00  0.00           O+0
HETATM    7  C   UNK     0      12.926   5.923   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      12.926   4.383   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      11.592   3.613   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      10.259   4.383   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       8.925   3.613   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       7.591   4.383   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       6.258   3.613   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       6.258   2.073   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       4.924   1.303   0.000  0.00  0.00           C+0
HETATM   16  O   UNK     0       4.924  -0.237   0.000  0.00  0.00           O+0
HETATM   17  C   UNK     0       3.590   2.073   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       3.590   3.613   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       4.924   4.383   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0       2.126   4.089   0.000  0.00  0.00           O+0
HETATM   21  C   UNK     0       1.220   2.843   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      -0.320   2.843   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      -1.090   1.509   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      -2.630   1.509   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      -3.400   2.843   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0      -4.940   2.843   0.000  0.00  0.00           O+0
HETATM   27  C   UNK     0      -5.710   4.177   0.000  0.00  0.00           C+0
HETATM   28  O   UNK     0      -7.250   4.177   0.000  0.00  0.00           O+0
HETATM   29  C   UNK     0      -8.020   5.510   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0      -9.560   5.510   0.000  0.00  0.00           C+0
HETATM   31  O   UNK     0     -10.330   4.177   0.000  0.00  0.00           O+0
HETATM   32  C   UNK     0      -7.250   6.844   0.000  0.00  0.00           C+0
HETATM   33  O   UNK     0      -8.020   8.178   0.000  0.00  0.00           O+0
HETATM   34  C   UNK     0      -5.710   6.844   0.000  0.00  0.00           C+0
HETATM   35  O   UNK     0      -4.940   8.178   0.000  0.00  0.00           O+0
HETATM   36  C   UNK     0      -4.940   5.510   0.000  0.00  0.00           C+0
HETATM   37  O   UNK     0      -3.400   5.510   0.000  0.00  0.00           O+0
HETATM   38  C   UNK     0      -2.630   4.177   0.000  0.00  0.00           C+0
HETATM   39  C   UNK     0      -1.090   4.177   0.000  0.00  0.00           C+0
HETATM   40  O   UNK     0      -0.320   5.510   0.000  0.00  0.00           O+0
HETATM   41  C   UNK     0       2.126   1.597   0.000  0.00  0.00           C+0
HETATM   42  C   UNK     0       1.650   0.132   0.000  0.00  0.00           C+0
HETATM   43  C   UNK     0       2.680  -1.012   0.000  0.00  0.00           C+0
HETATM   44  C   UNK     0       2.204  -2.477   0.000  0.00  0.00           C+0
HETATM   45  O   UNK     0       3.235  -3.621   0.000  0.00  0.00           O+0
HETATM   46  C   UNK     0       0.698  -2.797   0.000  0.00  0.00           C+0
HETATM   47  C   UNK     0      -0.333  -1.652   0.000  0.00  0.00           C+0
HETATM   48  O   UNK     0      -1.839  -1.973   0.000  0.00  0.00           O+0
HETATM   49  C   UNK     0       0.143  -0.188   0.000  0.00  0.00           C+0
HETATM   50  C   UNK     0      10.259   5.923   0.000  0.00  0.00           C+0
HETATM   51  C   UNK     0      11.592   6.693   0.000  0.00  0.00           C+0
HETATM   52  C   UNK     0      12.926   9.003   0.000  0.00  0.00           C+0
HETATM   53  O   UNK     0      11.592   8.233   0.000  0.00  0.00           O+0
HETATM   54  C   UNK     0      12.926  10.543   0.000  0.00  0.00           C+0
HETATM   55  O   UNK     0      11.592  11.313   0.000  0.00  0.00           O+0
HETATM   56  C   UNK     0      14.260  11.313   0.000  0.00  0.00           C+0
HETATM   57  O   UNK     0      14.260  12.853   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4   56                                                  
CONECT    4    3    5                                                       
CONECT    5    4    6   52                                                  
CONECT    6    5    7                                                       
CONECT    7    6    8   51                                                  
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11   50                                                  
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14   19                                                  
CONECT   14   13   15                                                       
CONECT   15   14   16   17                                                  
CONECT   16   15                                                            
CONECT   17   15   18   41                                                  
CONECT   18   17   19   20                                                  
CONECT   19   18   13                                                       
CONECT   20   18   21                                                       
CONECT   21   20   22   41                                                  
CONECT   22   21   23   39                                                  
CONECT   23   22   24                                                       
CONECT   24   23   25                                                       
CONECT   25   24   26   38                                                  
CONECT   26   25   27                                                       
CONECT   27   26   28   36                                                  
CONECT   28   27   29                                                       
CONECT   29   28   30   32                                                  
CONECT   30   29   31                                                       
CONECT   31   30                                                            
CONECT   32   29   33   34                                                  
CONECT   33   32                                                            
CONECT   34   32   35   36                                                  
CONECT   35   34                                                            
CONECT   36   34   27   37                                                  
CONECT   37   36                                                            
CONECT   38   25   39                                                       
CONECT   39   38   22   40                                                  
CONECT   40   39                                                            
CONECT   41   21   17   42                                                  
CONECT   42   41   43   49                                                  
CONECT   43   42   44                                                       
CONECT   44   43   45   46                                                  
CONECT   45   44                                                            
CONECT   46   44   47                                                       
CONECT   47   46   48   49                                                  
CONECT   48   47                                                            
CONECT   49   47   42                                                       
CONECT   50   10   51                                                       
CONECT   51   50    7                                                       
CONECT   52    5   53   54                                                  
CONECT   53   52                                                            
CONECT   54   52   55   56                                                  
CONECT   55   54                                                            
CONECT   56   54    3   57                                                  
CONECT   57   56                                                            
MASTER        0    0    0    0    0    0    0    0   57    0  126    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₄₀H₄₂O₁₇

Average Mass

794.7590 Da

Monoisotopic Mass

794.24220 Da

IUPAC Name

Traditional Name

CAS Registry Number

Not Available

SMILES

OC[C@H]1O[C@@H](OC2=CC=C(\C=C\C3=CC(O)=C4[C@H]([C@@H](OC4=C3)C3=CC=C(O[C@@H]4O[C@H](CO)[C@@H](O)[C@H](O)[C@H]4O)C=C3O)C3=CC(O)=CC(O)=C3)C=C2)[C@H](O)[C@@H](O)[C@@H]1O

InChI Identifier

InChI=1S/C40H42O17/c41-15-28-32(47)34(49)36(51)39(56-28)53-22-5-3-17(4-6-22)1-2-18-9-26(46)31-27(10-18)55-38(30(31)19-11-20(43)13-21(44)12-19)24-8-7-23(14-25(24)45)54-40-37(52)35(50)33(48)29(16-42)57-40/h1-14,28-30,32-52H,15-16H2/b2-1+/t28-,29-,30-,32-,33-,34+,35+,36-,37-,38+,39-,40-/m1/s1

InChI Key

ZOKDLHVYZRCXFJ-NMEBUZTNSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Gnetum africanum	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as 2-arylbenzofuran flavonoids. These are phenylpropanoids containing the 2-phenylbenzofuran moiety.

Kingdom

Organic compounds

Super Class

Phenylpropanoids and polyketides

Class

2-arylbenzofuran flavonoids

Sub Class

Not Available

Direct Parent

2-arylbenzofuran flavonoids

Alternative Parents

Substituents

2-arylbenzofuran flavonoid
Stilbene glycoside
Linear 1,7-diphenylheptane skeleton
Phenolic glycoside
1-phenylcoumaran
Stilbene
Glycosyl compound
O-glycosyl compound
Coumaran
Resorcinol
Phenol ether
Styrene
Phenoxy compound
1-hydroxy-2-unsubstituted benzenoid
1-hydroxy-4-unsubstituted benzenoid
Phenol
Alkyl aryl ether
Monocyclic benzene moiety
Monosaccharide
Oxane
Benzenoid
Secondary alcohol
Organoheterocyclic compound
Oxacycle
Ether
Acetal
Polyol
Organic oxygen compound
Organooxygen compound
Alcohol
Hydrocarbon derivative
Primary alcohol
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.12	ChemAxon
pKa (Strongest Acidic)	8.59	ChemAxon
pKa (Strongest Basic)	-3.7	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	17	ChemAxon
Hydrogen Donor Count	12	ChemAxon
Polar Surface Area	288.91 Å²	ChemAxon
Rotatable Bond Count	10	ChemAxon
Refractivity	196.31 m³·mol⁻¹	ChemAxon
Polarizability	81.41 Å³	ChemAxon
Number of Rings	7	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

163186206

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (2s,3r,4s,5s,6r)-2-{4-[(1e)-2-[(2r,3r)-3-(3,5-dihydroxyphenyl)-4-hydroxy-2-(2-hydroxy-4-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}phenyl)-2,3-dihydro-1-benzofuran-6-yl]ethenyl]phenoxy}-6-(hydroxymethyl)oxane-3,4,5-triol (NP0321486)

MOL for NP0321486 ((2s,3r,4s,5s,6r)-2-{4-[(1e)-2-[(2r,3r)-3-(3,5-dihydroxyphenyl)-4-hydroxy-2-(2-hydroxy-4-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}phenyl)-2,3-dihydro-1-benzofuran-6-yl]ethenyl]phenoxy}-6-(hydroxymethyl)oxane-3,4,5-triol)

3D MOL for NP0321486 ((2s,3r,4s,5s,6r)-2-{4-[(1e)-2-[(2r,3r)-3-(3,5-dihydroxyphenyl)-4-hydroxy-2-(2-hydroxy-4-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}phenyl)-2,3-dihydro-1-benzofuran-6-yl]ethenyl]phenoxy}-6-(hydroxymethyl)oxane-3,4,5-triol)

3D SDF for NP0321486 ((2s,3r,4s,5s,6r)-2-{4-[(1e)-2-[(2r,3r)-3-(3,5-dihydroxyphenyl)-4-hydroxy-2-(2-hydroxy-4-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}phenyl)-2,3-dihydro-1-benzofuran-6-yl]ethenyl]phenoxy}-6-(hydroxymethyl)oxane-3,4,5-triol)

3D-SDF for NP0321486 ((2s,3r,4s,5s,6r)-2-{4-[(1e)-2-[(2r,3r)-3-(3,5-dihydroxyphenyl)-4-hydroxy-2-(2-hydroxy-4-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}phenyl)-2,3-dihydro-1-benzofuran-6-yl]ethenyl]phenoxy}-6-(hydroxymethyl)oxane-3,4,5-triol)

PDB for NP0321486 ((2s,3r,4s,5s,6r)-2-{4-[(1e)-2-[(2r,3r)-3-(3,5-dihydroxyphenyl)-4-hydroxy-2-(2-hydroxy-4-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}phenyl)-2,3-dihydro-1-benzofuran-6-yl]ethenyl]phenoxy}-6-(hydroxymethyl)oxane-3,4,5-triol)

3D PDB for NP0321486 ((2s,3r,4s,5s,6r)-2-{4-[(1e)-2-[(2r,3r)-3-(3,5-dihydroxyphenyl)-4-hydroxy-2-(2-hydroxy-4-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}phenyl)-2,3-dihydro-1-benzofuran-6-yl]ethenyl]phenoxy}-6-(hydroxymethyl)oxane-3,4,5-triol)

SMILES for NP0321486 ((2s,3r,4s,5s,6r)-2-{4-[(1e)-2-[(2r,3r)-3-(3,5-dihydroxyphenyl)-4-hydroxy-2-(2-hydroxy-4-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}phenyl)-2,3-dihydro-1-benzofuran-6-yl]ethenyl]phenoxy}-6-(hydroxymethyl)oxane-3,4,5-triol)

INCHI for NP0321486 ((2s,3r,4s,5s,6r)-2-{4-[(1e)-2-[(2r,3r)-3-(3,5-dihydroxyphenyl)-4-hydroxy-2-(2-hydroxy-4-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}phenyl)-2,3-dihydro-1-benzofuran-6-yl]ethenyl]phenoxy}-6-(hydroxymethyl)oxane-3,4,5-triol)

Structure for NP0321486 ((2s,3r,4s,5s,6r)-2-{4-[(1e)-2-[(2r,3r)-3-(3,5-dihydroxyphenyl)-4-hydroxy-2-(2-hydroxy-4-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}phenyl)-2,3-dihydro-1-benzofuran-6-yl]ethenyl]phenoxy}-6-(hydroxymethyl)oxane-3,4,5-triol)

3D Structure for NP0321486 ((2s,3r,4s,5s,6r)-2-{4-[(1e)-2-[(2r,3r)-3-(3,5-dihydroxyphenyl)-4-hydroxy-2-(2-hydroxy-4-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}phenyl)-2,3-dihydro-1-benzofuran-6-yl]ethenyl]phenoxy}-6-(hydroxymethyl)oxane-3,4,5-triol)