NP-MRD: Showing NP-Card for (1s,2r,3r,7s,8r,11r,12r)-3,7-bis(acetyloxy)-14,14-dimethyl-6-oxatetracyclo[9.2.1.0⁴,¹².0⁸,¹²]tetradec-4-en-2-yl (2z)-2-methylbut-2-enoate (NP0320768)

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Record Information

Version

2.0

Created at

2022-09-11 22:36:35 UTC

Updated at

2022-09-11 22:36:35 UTC

NP-MRD ID

NP0320768

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(1s,2r,3r,7s,8r,11r,12r)-3,7-bis(acetyloxy)-14,14-dimethyl-6-oxatetracyclo[9.2.1.0⁴,¹².0⁸,¹²]tetradec-4-en-2-yl (2z)-2-methylbut-2-enoate

Description

(1S,2R,3R,7S,8R,11R,12R)-3,7-bis(acetyloxy)-14,14-dimethyl-6-oxatetracyclo[9.2.1.0⁴,¹².0⁸,¹²]Tetradec-4-en-2-yl (2Z)-2-methylbut-2-enoate belongs to the class of organic compounds known as cedrane and isocedrane sesquiterpenoids. These are sesquiternoids with a structure based on the cedrane or the isocedrane skeleton. Cedrane is a tricyclic molecules a 3,6,8,8-tetramethyl-1H-3a,7-methano-azulene moiety. Isocedrane is a rearranged cedrane arising from the migration of methyl group moved from the 6-position to the 4-position. (1s,2r,3r,7s,8r,11r,12r)-3,7-bis(acetyloxy)-14,14-dimethyl-6-oxatetracyclo[9.2.1.0⁴,¹².0⁸,¹²]tetradec-4-en-2-yl (2z)-2-methylbut-2-enoate is found in Perezia multiflora. Based on a literature review very few articles have been published on (1S,2R,3R,7S,8R,11R,12R)-3,7-bis(acetyloxy)-14,14-dimethyl-6-oxatetracyclo[9.2.1.0⁴,¹².0⁸,¹²]Tetradec-4-en-2-yl (2Z)-2-methylbut-2-enoate.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309122200362D          

 31 34  0  0  1  0            999 V2000
   -1.5827    1.4959    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2885    2.2667    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4739    2.3973    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1797    3.1681    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0465    1.7571    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2477    0.9864    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8611    1.8877    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.3815    1.2476    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.0628    0.5909    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.5833   -0.0493    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4223   -0.0327    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.7165    0.7380    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5311    0.8686    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0515    0.2285    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7573   -0.5423    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.2777   -1.1824    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.9835   -1.9532    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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    3.1689   -2.0838    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9427   -0.6729    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
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    0.6121   -0.3300    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3087    0.2627    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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    2.4903    2.1490    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
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    2.2641    3.5599    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1553    2.6585    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  3  4  1  0  0  0  0
  3  5  1  0  0  0  0
  5  6  2  0  0  0  0
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  8  7  1  1  0  0  0
  8  9  1  0  0  0  0
  9 10  1  6  0  0  0
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 28 29  1  0  0  0  0
 29 30  1  0  0  0  0
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M  END

     RDKit          3D

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    2.9086   -0.4310    0.1564 C   0  0  2  0  0  0  0  0  0  0  0  0
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M  END


  Mrv1652309122200362D          

 31 34  0  0  1  0            999 V2000
   -1.5827    1.4959    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2885    2.2667    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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M  END
> <DATABASE_ID>
NP0320768

> <DATABASE_NAME>
NP-MRD

> <SMILES>
C\C=C(\C)C(=O)O[C@@H]1[C@H]2C[C@]34[C@@H](CC[C@@H]3C2(C)C)[C@H](OC(C)=O)OC=C4[C@H]1OC(C)=O

> <INCHI_IDENTIFIER>
InChI=1S/C24H32O7/c1-7-12(2)21(27)31-19-16-10-24-15(8-9-18(24)23(16,5)6)22(30-14(4)26)28-11-17(24)20(19)29-13(3)25/h7,11,15-16,18-20,22H,8-10H2,1-6H3/b12-7-/t15-,16+,18+,19+,20+,22-,24+/m0/s1

> <INCHI_KEY>
ILHBQKPGVIRPLA-PCNNIPIJSA-N

> <FORMULA>
C24H32O7

> <MOLECULAR_WEIGHT>
432.513

> <EXACT_MASS>
432.21480337

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
63

> <JCHEM_AVERAGE_POLARIZABILITY>
46.36547782275947

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1S,2R,3R,7S,8R,11R,12R)-3,7-bis(acetyloxy)-14,14-dimethyl-6-oxatetracyclo[9.2.1.0^{4,12}.0^{8,12}]tetradec-4-en-2-yl (2Z)-2-methylbut-2-enoate

> <JCHEM_LOGP>
3.230211393666666

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_BASIC>
-4.886381855830309

> <JCHEM_POLAR_SURFACE_AREA>
88.13

> <JCHEM_REFRACTIVITY>
110.95909999999999

> <JCHEM_ROTATABLE_BOND_COUNT>
7

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
(1S,2R,3R,7S,8R,11R,12R)-3,7-bis(acetyloxy)-14,14-dimethyl-6-oxatetracyclo[9.2.1.0^{4,12}.0^{8,12}]tetradec-4-en-2-yl (2Z)-2-methylbut-2-enoate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 12-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   12-SEP-22         0                                  
HETATM    1  C   UNK     0      -2.954   2.792   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -2.405   4.231   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -0.885   4.475   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -0.335   5.914   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       0.087   3.280   0.000  0.00  0.00           C+0
HETATM    6  O   UNK     0      -0.462   1.841   0.000  0.00  0.00           O+0
HETATM    7  O   UNK     0       1.607   3.524   0.000  0.00  0.00           O+0
HETATM    8  C   UNK     0       2.579   2.329   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       1.984   1.103   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       2.955  -0.092   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       4.522  -0.061   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       5.071   1.378   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       6.591   1.621   0.000  0.00  0.00           C+0
HETATM   14  O   UNK     0       7.563   0.426   0.000  0.00  0.00           O+0
HETATM   15  C   UNK     0       7.014  -1.012   0.000  0.00  0.00           C+0
HETATM   16  O   UNK     0       7.985  -2.207   0.000  0.00  0.00           O+0
HETATM   17  C   UNK     0       7.436  -3.646   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       8.407  -4.841   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0       5.915  -3.890   0.000  0.00  0.00           O+0
HETATM   20  C   UNK     0       5.493  -1.256   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       4.657  -2.549   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       3.169  -2.153   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       3.085  -0.616   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       2.114   0.579   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       1.143  -0.616   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       0.576   0.490   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       4.099   2.573   0.000  0.00  0.00           C+0
HETATM   28  O   UNK     0       4.649   4.011   0.000  0.00  0.00           O+0
HETATM   29  C   UNK     0       3.677   5.206   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0       4.226   6.645   0.000  0.00  0.00           C+0
HETATM   31  O   UNK     0       2.157   4.963   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3    6    7                                                  
CONECT    6    5                                                            
CONECT    7    5    8                                                       
CONECT    8    7    9   27                                                  
CONECT    9    8   10   24                                                  
CONECT   10    9   11                                                       
CONECT   11   10   12   20   23                                             
CONECT   12   11   13   27                                                  
CONECT   13   12   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   16   20                                                  
CONECT   16   15   17                                                       
CONECT   17   16   18   19                                                  
CONECT   18   17                                                            
CONECT   19   17                                                            
CONECT   20   15   11   21                                                  
CONECT   21   20   22                                                       
CONECT   22   21   23                                                       
CONECT   23   22   11   24                                                  
CONECT   24   23    9   25   26                                             
CONECT   25   24                                                            
CONECT   26   24                                                            
CONECT   27   12    8   28                                                  
CONECT   28   27   29                                                       
CONECT   29   28   30   31                                                  
CONECT   30   29                                                            
CONECT   31   29                                                            
MASTER        0    0    0    0    0    0    0    0   31    0   68    0
END

View in JSmol

Synonyms

Value	Source
(1S,2R,3R,7S,8R,11R,12R)-3,7-Bis(acetyloxy)-14,14-dimethyl-6-oxatetracyclo[9.2.1.0,.0,]tetradec-4-en-2-yl (2Z)-2-methylbut-2-enoic acid	Generator

Chemical Formula

C₂₄H₃₂O₇

Average Mass

432.5130 Da

Monoisotopic Mass

432.21480 Da

IUPAC Name

(1S,2R,3R,7S,8R,11R,12R)-3,7-bis(acetyloxy)-14,14-dimethyl-6-oxatetracyclo[9.2.1.0^{4,12}.0^{8,12}]tetradec-4-en-2-yl (2Z)-2-methylbut-2-enoate

Traditional Name

(1S,2R,3R,7S,8R,11R,12R)-3,7-bis(acetyloxy)-14,14-dimethyl-6-oxatetracyclo[9.2.1.0^{4,12}.0^{8,12}]tetradec-4-en-2-yl (2Z)-2-methylbut-2-enoate

CAS Registry Number

Not Available

SMILES

C\C=C(\C)C(=O)O[C@@H]1[C@H]2C[C@]34[C@@H](CC[C@@H]3C2(C)C)[C@H](OC(C)=O)OC=C4[C@H]1OC(C)=O

InChI Identifier

InChI=1S/C24H32O7/c1-7-12(2)21(27)31-19-16-10-24-15(8-9-18(24)23(16,5)6)22(30-14(4)26)28-11-17(24)20(19)29-13(3)25/h7,11,15-16,18-20,22H,8-10H2,1-6H3/b12-7-/t15-,16+,18+,19+,20+,22-,24+/m0/s1

InChI Key

ILHBQKPGVIRPLA-PCNNIPIJSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Perezia multiflora	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as cedrane and isocedrane sesquiterpenoids. These are sesquiternoids with a structure based on the cedrane or the isocedrane skeleton. Cedrane is a tricyclic molecules a 3,6,8,8-tetramethyl-1H-3a,7-methano-azulene moiety. Isocedrane is a rearranged cedrane arising from the migration of methyl group moved from the 6-position to the 4-position.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Sesquiterpenoids

Direct Parent

Cedrane and isocedrane sesquiterpenoids

Alternative Parents

Substituents

Isocedrane sesquiterpenoid
Tricarboxylic acid or derivatives
Fatty acid ester
Fatty acyl
Enoate ester
Alpha,beta-unsaturated carboxylic ester
Carboxylic acid ester
Acetal
Carboxylic acid derivative
Organoheterocyclic compound
Oxacycle
Hydrocarbon derivative
Organic oxide
Organooxygen compound
Organic oxygen compound
Carbonyl group
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.23	ChemAxon
pKa (Strongest Basic)	-4.9	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	88.13 Å²	ChemAxon
Rotatable Bond Count	7	ChemAxon
Refractivity	110.96 m³·mol⁻¹	ChemAxon
Polarizability	46.37 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

163033497

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (1s,2r,3r,7s,8r,11r,12r)-3,7-bis(acetyloxy)-14,14-dimethyl-6-oxatetracyclo[9.2.1.0⁴,¹².0⁸,¹²]tetradec-4-en-2-yl (2z)-2-methylbut-2-enoate (NP0320768)

MOL for NP0320768 ((1s,2r,3r,7s,8r,11r,12r)-3,7-bis(acetyloxy)-14,14-dimethyl-6-oxatetracyclo[9.2.1.0⁴,¹².0⁸,¹²]tetradec-4-en-2-yl (2z)-2-methylbut-2-enoate)

3D MOL for NP0320768 ((1s,2r,3r,7s,8r,11r,12r)-3,7-bis(acetyloxy)-14,14-dimethyl-6-oxatetracyclo[9.2.1.0⁴,¹².0⁸,¹²]tetradec-4-en-2-yl (2z)-2-methylbut-2-enoate)

3D SDF for NP0320768 ((1s,2r,3r,7s,8r,11r,12r)-3,7-bis(acetyloxy)-14,14-dimethyl-6-oxatetracyclo[9.2.1.0⁴,¹².0⁸,¹²]tetradec-4-en-2-yl (2z)-2-methylbut-2-enoate)

3D-SDF for NP0320768 ((1s,2r,3r,7s,8r,11r,12r)-3,7-bis(acetyloxy)-14,14-dimethyl-6-oxatetracyclo[9.2.1.0⁴,¹².0⁸,¹²]tetradec-4-en-2-yl (2z)-2-methylbut-2-enoate)

PDB for NP0320768 ((1s,2r,3r,7s,8r,11r,12r)-3,7-bis(acetyloxy)-14,14-dimethyl-6-oxatetracyclo[9.2.1.0⁴,¹².0⁸,¹²]tetradec-4-en-2-yl (2z)-2-methylbut-2-enoate)

3D PDB for NP0320768 ((1s,2r,3r,7s,8r,11r,12r)-3,7-bis(acetyloxy)-14,14-dimethyl-6-oxatetracyclo[9.2.1.0⁴,¹².0⁸,¹²]tetradec-4-en-2-yl (2z)-2-methylbut-2-enoate)

SMILES for NP0320768 ((1s,2r,3r,7s,8r,11r,12r)-3,7-bis(acetyloxy)-14,14-dimethyl-6-oxatetracyclo[9.2.1.0⁴,¹².0⁸,¹²]tetradec-4-en-2-yl (2z)-2-methylbut-2-enoate)

INCHI for NP0320768 ((1s,2r,3r,7s,8r,11r,12r)-3,7-bis(acetyloxy)-14,14-dimethyl-6-oxatetracyclo[9.2.1.0⁴,¹².0⁸,¹²]tetradec-4-en-2-yl (2z)-2-methylbut-2-enoate)

Structure for NP0320768 ((1s,2r,3r,7s,8r,11r,12r)-3,7-bis(acetyloxy)-14,14-dimethyl-6-oxatetracyclo[9.2.1.0⁴,¹².0⁸,¹²]tetradec-4-en-2-yl (2z)-2-methylbut-2-enoate)

3D Structure for NP0320768 ((1s,2r,3r,7s,8r,11r,12r)-3,7-bis(acetyloxy)-14,14-dimethyl-6-oxatetracyclo[9.2.1.0⁴,¹².0⁸,¹²]tetradec-4-en-2-yl (2z)-2-methylbut-2-enoate)