NP-MRD: Showing NP-Card for 6,8-dihydroxy-13-methoxy-17,17-dimethyl-5,15-bis(3-methylbut-2-en-1-yl)-3,16-dioxapentacyclo[11.4.1.0²,¹¹.0²,¹⁵.0⁴,⁹]octadeca-4,6,8,11-tetraene-10,14-dione (NP0319677)

Jump To Section:

Identification Spectra BioTaxonomy ChemoTaxonomy Physical properties Links References XML

Record Information

Version

2.0

Created at

2022-09-11 20:50:20 UTC

Updated at

2022-09-11 20:50:20 UTC

NP-MRD ID

NP0319677

Secondary Accession Numbers

None

Natural Product Identification

Common Name

6,8-dihydroxy-13-methoxy-17,17-dimethyl-5,15-bis(3-methylbut-2-en-1-yl)-3,16-dioxapentacyclo[11.4.1.0²,¹¹.0²,¹⁵.0⁴,⁹]octadeca-4,6,8,11-tetraene-10,14-dione

Description

6,8-Dihydroxy-13-methoxy-17,17-dimethyl-5,15-bis(3-methylbut-2-en-1-yl)-3,16-dioxapentacyclo[11.4.1.0²,¹¹.0²,¹⁵.0⁴,⁹]Octadeca-4,6,8,11-tetraene-10,14-dione belongs to the class of organic compounds known as xanthones. These are polycyclic aromatic compounds containing a xanthene moiety conjugated to a ketone group at carbon 9. Xanthene is a tricyclic compound made up of two benzene rings linearly fused to each other through a pyran ring. 6,8-dihydroxy-13-methoxy-17,17-dimethyl-5,15-bis(3-methylbut-2-en-1-yl)-3,16-dioxapentacyclo[11.4.1.0²,¹¹.0²,¹⁵.0⁴,⁹]octadeca-4,6,8,11-tetraene-10,14-dione is found in Garcinia gaudichaudii. 6,8-Dihydroxy-13-methoxy-17,17-dimethyl-5,15-bis(3-methylbut-2-en-1-yl)-3,16-dioxapentacyclo[11.4.1.0²,¹¹.0²,¹⁵.0⁴,⁹]Octadeca-4,6,8,11-tetraene-10,14-dione is an extremely weak basic (essentially neutral) compound (based on its pKa).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1533004191517342D          

 36 40  0  0  0  0            999 V2000
    0.0437   -2.1225    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3964   -1.4247    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0121   -0.6947    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3267    0.3370    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2550    0.7044    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0167    1.4511    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7569    1.8154    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4531    2.1293    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5621    0.9074    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3389    0.2871    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9545    0.8363    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7380    0.5778    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3536    1.1270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1858    1.9348    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1370    0.8685    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7536   -0.4921    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5110   -0.8190    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7678    0.2693    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5267    0.6337    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.3170    0.3495    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9481    0.8808    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8036    1.6930    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0280    1.9740    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8835    2.7862    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1078    3.0672    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5146    3.3175    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7238    0.5998    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3550    1.1310    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.8683   -0.2125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2372   -0.7437    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3817   -1.5560    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.4615   -0.4628    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8480   -1.0037    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9483   -1.8226    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0964   -0.6134    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5774   -1.1935    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  6  8  1  0  0  0  0
  6  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
 13 15  1  0  0  0  0
 10 16  1  0  0  0  0
  3 16  1  0  0  0  0
 16 17  2  0  0  0  0
 10 18  1  0  0  0  0
  5 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  2  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  2  0  0  0  0
 24 25  1  0  0  0  0
 24 26  1  0  0  0  0
 21 27  1  0  0  0  0
 27 28  1  0  0  0  0
 27 29  2  0  0  0  0
 29 30  1  0  0  0  0
 30 31  1  0  0  0  0
 30 32  2  0  0  0  0
 20 32  1  0  0  0  0
 32 33  1  0  0  0  0
 33 34  2  0  0  0  0
 33 35  1  0  0  0  0
 18 35  1  0  0  0  0
 35 36  2  0  0  0  0
  3 36  1  0  0  0  0
M  END

     RDKit          3D

 70 74  0  0  0  0  0  0  0  0999 V2000
   -4.1335    1.3563   -2.5213 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8324    2.0237   -1.3550 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6558    1.6316   -0.8163 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.4603    1.8402   -1.7094 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3054    1.7750   -1.0640 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9254    2.4142   -1.4966 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9131    3.1752   -2.4890 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1922    2.1844   -0.7893 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3615    2.7626   -1.1488 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5191    3.6095   -2.1917 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.5050    2.4640   -0.3829 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4617    1.6191    0.6945 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5946    1.3249    1.4509 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2389    1.0476    1.0266 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1519    0.1468    2.1850 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0655   -1.2561    1.8202 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0893   -1.9073    0.7053 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9608   -3.4326    0.7956 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2342   -1.4037   -0.6719 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0943    1.3224    0.2933 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9240    0.7104    0.7023 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3412    1.0018    0.2010 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.1955    1.8187    1.2121 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.3253    2.4433    0.4600 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5766    0.7334    2.1656 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6860    0.7785    3.4173 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9886    0.7717    2.6494 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3730   -0.4890    1.5370 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2365   -0.2101    0.1565 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.6876   -1.3970   -0.5487 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6882   -2.5085   -0.3227 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2994   -3.0969   -1.3365 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9839   -2.6439   -2.7134 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2881   -4.1897   -1.1735 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5720    0.2068   -0.3869 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5006   -0.5479   -0.4686 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2235    0.2641   -2.4369 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3848    1.5707   -3.3408 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1313    1.7424   -2.9154 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5212    2.0251   -2.7584 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8558    3.9254   -2.8205 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4601    2.9199   -0.6544 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4661    1.7457    1.1968 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0540    0.3146    2.8397 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2785    0.3952    2.8354 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9491   -1.9420    2.7362 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0969   -3.6972    0.1601 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8759   -3.8988    0.3491 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8954   -3.7709    1.8278 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2570   -1.1071   -1.1516 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9641   -0.6127   -0.8271 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5904   -2.2313   -1.3694 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5039    2.5631    1.6636 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2197    2.6780    1.0366 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9273    3.4168    0.0409 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2726    1.0039    4.3147 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1106    1.5598    3.2580 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1947   -0.1830    3.5443 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7281    0.8918    1.8441 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1984   -0.2513    3.0843 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1494    1.4696    3.4947 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5511   -1.1841   -1.6139 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2568   -1.7687   -0.0946 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9184   -2.8387    0.6745 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1255   -1.5442   -2.8532 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6442   -3.1194   -3.4688 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9448   -2.8900   -3.0254 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6165   -4.3529   -0.1466 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1877   -4.0368   -1.8096 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7693   -5.1368   -1.5006 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  3  2  1  6
  3 24  1  0
 24 23  1  0
 23 25  1  0
 25 26  1  0
 25 27  1  0
 25 28  1  0
 28 29  1  0
 29 30  1  6
 30 31  1  0
 31 32  2  3
 32 33  1  0
 32 34  1  0
 29 35  1  0
 35 36  2  0
 29 22  1  0
 22 21  1  1
 21 20  1  0
 20 14  2  0
 14 15  1  0
 15 16  1  0
 16 17  2  3
 17 18  1  0
 17 19  1  0
 14 12  1  0
 12 13  1  0
 12 11  2  0
 11  9  1  0
  9 10  1  0
  9  8  2  0
  8  6  1  0
  6  7  2  0
  6  5  1  0
  5  4  2  0
 35  3  1  0
  5 22  1  0
  4  3  1  0
 22 23  1  0
  8 20  1  0
  1 37  1  0
  1 38  1  0
  1 39  1  0
 24 54  1  0
 24 55  1  0
 23 53  1  1
 26 56  1  0
 26 57  1  0
 26 58  1  0
 27 59  1  0
 27 60  1  0
 27 61  1  0
 30 62  1  0
 30 63  1  0
 31 64  1  0
 33 65  1  0
 33 66  1  0
 33 67  1  0
 34 68  1  0
 34 69  1  0
 34 70  1  0
 15 44  1  0
 15 45  1  0
 16 46  1  0
 18 47  1  0
 18 48  1  0
 18 49  1  0
 19 50  1  0
 19 51  1  0
 19 52  1  0
 13 43  1  0
 11 42  1  0
 10 41  1  0
  4 40  1  0
M  END


  Mrv1533004191517342D          

 36 40  0  0  0  0            999 V2000
    0.0437   -2.1225    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3964   -1.4247    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0121   -0.6947    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3267    0.3370    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2550    0.7044    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0167    1.4511    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7569    1.8154    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4531    2.1293    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5621    0.9074    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3389    0.2871    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9545    0.8363    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7380    0.5778    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3536    1.1270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1858    1.9348    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1370    0.8685    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7536   -0.4921    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5110   -0.8190    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7678    0.2693    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5267    0.6337    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.3170    0.3495    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9481    0.8808    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8036    1.6930    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0280    1.9740    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8835    2.7862    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1078    3.0672    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5146    3.3175    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7238    0.5998    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3550    1.1310    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.8683   -0.2125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2372   -0.7437    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3817   -1.5560    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.4615   -0.4628    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8480   -1.0037    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9483   -1.8226    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0964   -0.6134    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5774   -1.1935    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  6  8  1  0  0  0  0
  6  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
 13 15  1  0  0  0  0
 10 16  1  0  0  0  0
  3 16  1  0  0  0  0
 16 17  2  0  0  0  0
 10 18  1  0  0  0  0
  5 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  2  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  2  0  0  0  0
 24 25  1  0  0  0  0
 24 26  1  0  0  0  0
 21 27  1  0  0  0  0
 27 28  1  0  0  0  0
 27 29  2  0  0  0  0
 29 30  1  0  0  0  0
 30 31  1  0  0  0  0
 30 32  2  0  0  0  0
 20 32  1  0  0  0  0
 32 33  1  0  0  0  0
 33 34  2  0  0  0  0
 33 35  1  0  0  0  0
 18 35  1  0  0  0  0
 35 36  2  0  0  0  0
  3 36  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0319677

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC12CC3C(C)(C)OC(CC=C(C)C)(C1=O)C31OC3=C(CC=C(C)C)C(O)=CC(O)=C3C(=O)C1=C2

> <INCHI_IDENTIFIER>
InChI=1S/C29H34O7/c1-15(2)8-9-17-19(30)12-20(31)22-23(32)18-13-27(34-7)14-21-26(5,6)36-28(25(27)33,11-10-16(3)4)29(18,21)35-24(17)22/h8,10,12-13,21,30-31H,9,11,14H2,1-7H3

> <INCHI_KEY>
NROYLORRLOZTAW-UHFFFAOYSA-N

> <FORMULA>
C29H34O7

> <MOLECULAR_WEIGHT>
494.584

> <EXACT_MASS>
494.230453435

> <JCHEM_ACCEPTOR_COUNT>
7

> <JCHEM_ATOM_COUNT>
70

> <JCHEM_AVERAGE_POLARIZABILITY>
52.96237545874993

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
6,8-dihydroxy-13-methoxy-17,17-dimethyl-5,15-bis(3-methylbut-2-en-1-yl)-3,16-dioxapentacyclo[11.4.1.0²,¹¹.0²,¹⁵.0⁴,⁹]octadeca-4,6,8,11-tetraene-10,14-dione

> <ALOGPS_LOGP>
4.40

> <JCHEM_LOGP>
5.545909201666669

> <ALOGPS_LOGS>
-4.89

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
9.472981508383663

> <JCHEM_PKA_STRONGEST_ACIDIC>
7.747707935752311

> <JCHEM_PKA_STRONGEST_BASIC>
-3.916811413934678

> <JCHEM_POLAR_SURFACE_AREA>
102.29000000000002

> <JCHEM_REFRACTIVITY>
137.45749999999995

> <JCHEM_ROTATABLE_BOND_COUNT>
5

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
6.36e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
6,8-dihydroxy-13-methoxy-17,17-dimethyl-5,15-bis(3-methylbut-2-en-1-yl)-3,16-dioxapentacyclo[11.4.1.0²,¹¹.0²,¹⁵.0⁴,⁹]octadeca-4,6,8,11-tetraene-10,14-dione

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 19-APR-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   19-APR-15         0                                  
HETATM    1  C   UNK     0       0.082  -3.962   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0      -0.740  -2.660   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0      -0.023  -1.297   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       0.610   0.629   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      -0.476   1.315   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -0.031   2.709   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      -1.413   3.389   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       0.846   3.975   0.000  0.00  0.00           C+0
HETATM    9  O   UNK     0       1.049   1.694   0.000  0.00  0.00           O+0
HETATM   10  C   UNK     0      -0.633   0.536   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      -1.782   1.561   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      -3.244   1.079   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      -4.393   2.104   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      -4.080   3.612   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      -5.856   1.621   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      -1.407  -0.919   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0      -2.821  -1.529   0.000  0.00  0.00           O+0
HETATM   18  C   UNK     0       1.433   0.503   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0       2.850   1.183   0.000  0.00  0.00           O+0
HETATM   20  C   UNK     0       4.325   0.652   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       5.503   1.644   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       5.233   3.160   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       3.786   3.685   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       3.516   5.201   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       2.068   5.725   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       4.694   6.193   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       6.951   1.120   0.000  0.00  0.00           C+0
HETATM   28  O   UNK     0       8.129   2.111   0.000  0.00  0.00           O+0
HETATM   29  C   UNK     0       7.221  -0.397   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0       6.043  -1.388   0.000  0.00  0.00           C+0
HETATM   31  O   UNK     0       6.312  -2.904   0.000  0.00  0.00           O+0
HETATM   32  C   UNK     0       4.595  -0.864   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0       3.450  -1.874   0.000  0.00  0.00           C+0
HETATM   34  O   UNK     0       3.637  -3.402   0.000  0.00  0.00           O+0
HETATM   35  C   UNK     0       2.047  -1.145   0.000  0.00  0.00           C+0
HETATM   36  C   UNK     0       1.078  -2.228   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4   16   36                                             
CONECT    4    3    5                                                       
CONECT    5    4    6   18                                                  
CONECT    6    5    7    8    9                                             
CONECT    7    6                                                            
CONECT    8    6                                                            
CONECT    9    6   10                                                       
CONECT   10    9   11   16   18                                             
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14   15                                                  
CONECT   14   13                                                            
CONECT   15   13                                                            
CONECT   16   10    3   17                                                  
CONECT   17   16                                                            
CONECT   18   10    5   19   35                                             
CONECT   19   18   20                                                       
CONECT   20   19   21   32                                                  
CONECT   21   20   22   27                                                  
CONECT   22   21   23                                                       
CONECT   23   22   24                                                       
CONECT   24   23   25   26                                                  
CONECT   25   24                                                            
CONECT   26   24                                                            
CONECT   27   21   28   29                                                  
CONECT   28   27                                                            
CONECT   29   27   30                                                       
CONECT   30   29   31   32                                                  
CONECT   31   30                                                            
CONECT   32   30   20   33                                                  
CONECT   33   32   34   35                                                  
CONECT   34   33                                                            
CONECT   35   33   18   36                                                  
CONECT   36   35    3                                                       
MASTER        0    0    0    0    0    0    0    0   36    0   80    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₉H₃₄O₇

Average Mass

494.5840 Da

Monoisotopic Mass

494.23045 Da

IUPAC Name

6,8-dihydroxy-13-methoxy-17,17-dimethyl-5,15-bis(3-methylbut-2-en-1-yl)-3,16-dioxapentacyclo[11.4.1.0²,¹¹.0²,¹⁵.0⁴,⁹]octadeca-4,6,8,11-tetraene-10,14-dione

Traditional Name

6,8-dihydroxy-13-methoxy-17,17-dimethyl-5,15-bis(3-methylbut-2-en-1-yl)-3,16-dioxapentacyclo[11.4.1.0²,¹¹.0²,¹⁵.0⁴,⁹]octadeca-4,6,8,11-tetraene-10,14-dione

CAS Registry Number

Not Available

SMILES

COC12CC3C(C)(C)OC(CC=C(C)C)(C1=O)C31OC3=C(CC=C(C)C)C(O)=CC(O)=C3C(=O)C1=C2

InChI Identifier

InChI=1S/C29H34O7/c1-15(2)8-9-17-19(30)12-20(31)22-23(32)18-13-27(34-7)14-21-26(5,6)36-28(25(27)33,11-10-16(3)4)29(18,21)35-24(17)22/h8,10,12-13,21,30-31H,9,11,14H2,1-7H3

InChI Key

NROYLORRLOZTAW-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Garcinia gaudichaudii	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as xanthones. These are polycyclic aromatic compounds containing a xanthene moiety conjugated to a ketone group at carbon 9. Xanthene is a tricyclic compound made up of two benzene rings linearly fused to each other through a pyran ring.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Benzopyrans

Sub Class

1-benzopyrans

Direct Parent

Xanthones

Alternative Parents

Substituents

Xanthone
Chromone
Aromatic monoterpenoid
Monoterpenoid
Aryl ketone
1-hydroxy-2-unsubstituted benzenoid
Alkyl aryl ether
Cyclohexenone
Oxepane
Benzenoid
Vinylogous acid
Tetrahydrofuran
Ketone
Dialkyl ether
Ether
Oxacycle
Organic oxygen compound
Hydrocarbon derivative
Carbonyl group
Organic oxide
Organooxygen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	4.4	ALOGPS
logP	5.55	ChemAxon
logS	-4.9	ALOGPS
pKa (Strongest Acidic)	7.75	ChemAxon
pKa (Strongest Basic)	-3.9	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	7	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	102.29 Å²	ChemAxon
Rotatable Bond Count	5	ChemAxon
Refractivity	137.46 m³·mol⁻¹	ChemAxon
Polarizability	52.96 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

73193560

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for 6,8-dihydroxy-13-methoxy-17,17-dimethyl-5,15-bis(3-methylbut-2-en-1-yl)-3,16-dioxapentacyclo[11.4.1.0²,¹¹.0²,¹⁵.0⁴,⁹]octadeca-4,6,8,11-tetraene-10,14-dione (NP0319677)

MOL for NP0319677 (6,8-dihydroxy-13-methoxy-17,17-dimethyl-5,15-bis(3-methylbut-2-en-1-yl)-3,16-dioxapentacyclo[11.4.1.0²,¹¹.0²,¹⁵.0⁴,⁹]octadeca-4,6,8,11-tetraene-10,14-dione)

3D MOL for NP0319677 (6,8-dihydroxy-13-methoxy-17,17-dimethyl-5,15-bis(3-methylbut-2-en-1-yl)-3,16-dioxapentacyclo[11.4.1.0²,¹¹.0²,¹⁵.0⁴,⁹]octadeca-4,6,8,11-tetraene-10,14-dione)

3D SDF for NP0319677 (6,8-dihydroxy-13-methoxy-17,17-dimethyl-5,15-bis(3-methylbut-2-en-1-yl)-3,16-dioxapentacyclo[11.4.1.0²,¹¹.0²,¹⁵.0⁴,⁹]octadeca-4,6,8,11-tetraene-10,14-dione)

3D-SDF for NP0319677 (6,8-dihydroxy-13-methoxy-17,17-dimethyl-5,15-bis(3-methylbut-2-en-1-yl)-3,16-dioxapentacyclo[11.4.1.0²,¹¹.0²,¹⁵.0⁴,⁹]octadeca-4,6,8,11-tetraene-10,14-dione)

PDB for NP0319677 (6,8-dihydroxy-13-methoxy-17,17-dimethyl-5,15-bis(3-methylbut-2-en-1-yl)-3,16-dioxapentacyclo[11.4.1.0²,¹¹.0²,¹⁵.0⁴,⁹]octadeca-4,6,8,11-tetraene-10,14-dione)

3D PDB for NP0319677 (6,8-dihydroxy-13-methoxy-17,17-dimethyl-5,15-bis(3-methylbut-2-en-1-yl)-3,16-dioxapentacyclo[11.4.1.0²,¹¹.0²,¹⁵.0⁴,⁹]octadeca-4,6,8,11-tetraene-10,14-dione)

SMILES for NP0319677 (6,8-dihydroxy-13-methoxy-17,17-dimethyl-5,15-bis(3-methylbut-2-en-1-yl)-3,16-dioxapentacyclo[11.4.1.0²,¹¹.0²,¹⁵.0⁴,⁹]octadeca-4,6,8,11-tetraene-10,14-dione)

INCHI for NP0319677 (6,8-dihydroxy-13-methoxy-17,17-dimethyl-5,15-bis(3-methylbut-2-en-1-yl)-3,16-dioxapentacyclo[11.4.1.0²,¹¹.0²,¹⁵.0⁴,⁹]octadeca-4,6,8,11-tetraene-10,14-dione)

Structure for NP0319677 (6,8-dihydroxy-13-methoxy-17,17-dimethyl-5,15-bis(3-methylbut-2-en-1-yl)-3,16-dioxapentacyclo[11.4.1.0²,¹¹.0²,¹⁵.0⁴,⁹]octadeca-4,6,8,11-tetraene-10,14-dione)

3D Structure for NP0319677 (6,8-dihydroxy-13-methoxy-17,17-dimethyl-5,15-bis(3-methylbut-2-en-1-yl)-3,16-dioxapentacyclo[11.4.1.0²,¹¹.0²,¹⁵.0⁴,⁹]octadeca-4,6,8,11-tetraene-10,14-dione)