NP-MRD: Showing NP-Card for (2s,3s,4s,5r,6r)-6-{[(2r,3s,4s,5r,6s)-6-{[5,7-dihydroxy-2-(4-hydroxyphenyl)-4-oxochromen-3-yl]oxy}-3,4,5-trihydroxyoxan-2-yl]methoxy}-5-hydroxy-2-methyl-4-{[(2s,3r,4r,5s,6s)-3,4,5-tris(acetyloxy)-6-methyloxan-2-yl]oxy}oxan-3-yl acetate (NP0318016)

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Record Information

Version

2.0

Created at

2022-09-11 18:15:24 UTC

Updated at

2022-09-11 18:15:24 UTC

NP-MRD ID

NP0318016

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(2s,3s,4s,5r,6r)-6-{[(2r,3s,4s,5r,6s)-6-{[5,7-dihydroxy-2-(4-hydroxyphenyl)-4-oxochromen-3-yl]oxy}-3,4,5-trihydroxyoxan-2-yl]methoxy}-5-hydroxy-2-methyl-4-{[(2s,3r,4r,5s,6s)-3,4,5-tris(acetyloxy)-6-methyloxan-2-yl]oxy}oxan-3-yl acetate

Description

(2S,3S,4S,5R,6R)-6-{[(2R,3S,4S,5R,6S)-6-{[5,7-dihydroxy-2-(4-hydroxyphenyl)-4-oxo-4H-chromen-3-yl]oxy}-3,4,5-trihydroxyoxan-2-yl]methoxy}-5-hydroxy-2-methyl-4-{[(2S,3R,4R,5S,6S)-3,4,5-tris(acetyloxy)-6-methyloxan-2-yl]oxy}oxan-3-yl acetate belongs to the class of organic compounds known as flavonoid-3-o-glycosides. These are phenolic compounds containing a flavonoid moiety which is O-glycosidically linked to carbohydrate moiety at the C3-position. (2s,3s,4s,5r,6r)-6-{[(2r,3s,4s,5r,6s)-6-{[5,7-dihydroxy-2-(4-hydroxyphenyl)-4-oxochromen-3-yl]oxy}-3,4,5-trihydroxyoxan-2-yl]methoxy}-5-hydroxy-2-methyl-4-{[(2s,3r,4r,5s,6s)-3,4,5-tris(acetyloxy)-6-methyloxan-2-yl]oxy}oxan-3-yl acetate is found in Camellia reticulata. Based on a literature review very few articles have been published on (2S,3S,4S,5R,6R)-6-{[(2R,3S,4S,5R,6S)-6-{[5,7-dihydroxy-2-(4-hydroxyphenyl)-4-oxo-4H-chromen-3-yl]oxy}-3,4,5-trihydroxyoxan-2-yl]methoxy}-5-hydroxy-2-methyl-4-{[(2S,3R,4R,5S,6S)-3,4,5-tris(acetyloxy)-6-methyloxan-2-yl]oxy}oxan-3-yl acetate.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309112220152D          

 64 69  0  0  1  0            999 V2000
    5.7158   -6.6000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -6.1875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -5.3625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -6.6000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -6.1875    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.5724   -5.3625    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.2868   -4.9500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -4.9500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -5.3625    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.4289   -4.9500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -4.1250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -3.7125    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.7145   -2.8875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -2.4750    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.0000   -1.6500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434    1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -2.8875    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.4289   -2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -3.7125    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.4289   -4.1250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -4.1250    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.0000   -4.9500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -6.1875    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.4289   -6.6000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -6.6000    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.8579   -7.4250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -7.8375    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.4289   -7.4250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -7.8375    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.0000   -7.4250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -8.6625    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.0000   -9.0750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -8.6625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -7.8375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289   -9.0750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -9.0750    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.4289   -9.9000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145  -10.3125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145  -11.1375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0000   -9.9000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -8.6625    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.8579   -9.0750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -9.9000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434  -10.3125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724  -10.3125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  2  4  1  0  0  0  0
  5  4  1  6  0  0  0
  5  6  1  0  0  0  0
  6  7  1  1  0  0  0
  6  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  6  0  0  0
 10 11  1  0  0  0  0
 12 11  1  6  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  6  0  0  0
 15 16  1  0  0  0  0
 16 17  2  0  0  0  0
 17 18  1  0  0  0  0
 18 19  2  0  0  0  0
 19 20  1  0  0  0  0
 20 21  2  0  0  0  0
 21 22  1  0  0  0  0
 21 23  1  0  0  0  0
 23 24  2  0  0  0  0
 18 24  1  0  0  0  0
 17 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  2  0  0  0  0
 27 28  1  0  0  0  0
 28 29  1  0  0  0  0
 28 30  2  0  0  0  0
 30 31  1  0  0  0  0
 31 32  1  0  0  0  0
 31 33  2  0  0  0  0
 26 33  1  0  0  0  0
 33 34  1  0  0  0  0
 16 34  1  0  0  0  0
 34 35  2  0  0  0  0
 14 36  1  0  0  0  0
 36 37  1  1  0  0  0
 36 38  1  0  0  0  0
 38 39  1  6  0  0  0
 38 40  1  0  0  0  0
 12 40  1  0  0  0  0
 40 41  1  1  0  0  0
  9 42  1  0  0  0  0
 42 43  1  1  0  0  0
 42 44  1  0  0  0  0
  5 44  1  0  0  0  0
 44 45  1  1  0  0  0
 46 45  1  1  0  0  0
 46 47  1  0  0  0  0
 47 48  1  0  0  0  0
 48 49  1  6  0  0  0
 48 50  1  0  0  0  0
 50 51  1  1  0  0  0
 51 52  1  0  0  0  0
 52 53  1  0  0  0  0
 52 54  2  0  0  0  0
 50 55  1  0  0  0  0
 55 56  1  6  0  0  0
 56 57  1  0  0  0  0
 57 58  1  0  0  0  0
 57 59  2  0  0  0  0
 55 60  1  0  0  0  0
 46 60  1  0  0  0  0
 60 61  1  6  0  0  0
 61 62  1  0  0  0  0
 62 63  1  0  0  0  0
 62 64  2  0  0  0  0
M  END

     RDKit          3D

112117  0  0  0  0  0  0  0  0999 V2000
    1.3424   -4.9596    0.9917 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7503   -3.7809    0.1850 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4636   -3.9741   -0.8420 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4134   -2.4724    0.4609 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8244   -1.3818   -0.3425 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.5664   -0.8047   -0.9506 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.1558   -1.7394   -2.0768 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7934    0.4749   -1.3964 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7354    1.3069   -0.2583 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.5775    1.2459    0.1840 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2828    2.4358    0.0283 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6944    2.1790    0.5863 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.2076    1.1385   -0.1160 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2638    0.4700    0.4529 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.8946   -0.3682   -0.5238 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2295   -0.7047   -0.4601 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2276    0.0668   -0.9708 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0320    1.3550   -1.6718 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8586    1.8235   -2.1583 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7609    3.0734   -2.7567 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8905    3.8531   -2.8574 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8325    5.1176   -3.4526 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.1013    3.3943   -2.3692 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.1736    2.1582   -1.7821 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.4804   -0.3730   -0.8289 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.7722   -1.4868   -0.2378 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.1120   -1.8904   -0.1220 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.3958   -3.0914    0.5180 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -8.1045   -3.5128    0.9338 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0657   -4.2782    1.4397 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8173   -2.3183    0.2972 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5137   -1.9116    0.1793 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6166   -2.6637    0.6591 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7737   -0.2922    1.6580 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.8626   -0.5135    2.5536 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7521    0.4698    2.4071 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.5383   -0.2530    2.3116 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5211    1.8874    2.0542 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.4751    2.6635    2.7410 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.6359    0.8147    0.8253 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.5044    1.8798    1.1692 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5566   -0.3196    0.3855 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.5625    0.2895   -0.3886 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.7954    0.2867    0.2633 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.0789    1.6343    0.5147 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7062    2.2258   -0.5796 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.6587    3.7226   -0.3822 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1597    1.7742   -0.6756 C   0  0  2  0  0  0  0  0  0  0  0  0
    7.6408    2.2181   -1.9310 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.7057    3.1046   -1.9955 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.2568    3.6066   -3.2836 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.2134    3.4887   -0.9256 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.1646    0.2824   -0.5757 C   0  0  1  0  0  0  0  0  0  0  0  0
    7.9639   -0.2019    0.4819 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.0980   -0.9358    0.3428 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.8439   -1.3792    1.5432 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.5138   -1.2363   -0.7801 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7979   -0.3580   -0.6189 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.9867   -1.7044   -0.1496 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.6966   -2.7743   -0.9664 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8712   -4.1890   -0.5384 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2659   -2.5258   -2.1242 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4097   -5.4290    0.5906 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2386   -4.7573    2.0581 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1254   -5.7399    0.8656 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4455   -1.7135   -1.2024 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2629   -0.8621   -0.1957 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0612   -1.9896   -2.6676 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1698   -2.6862   -1.6041 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6589   -1.3319   -2.6992 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9480    2.3350   -0.6104 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3229    2.7037   -1.0457 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7841    3.2411    0.5985 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2969    3.0909    0.4146 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0917    1.1388    0.8437 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9770    1.2152   -2.1232 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7877    3.4198   -3.1371 H   0  0  0  0  0  0  0  0  0  0  0  0
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M  END


  Mrv1652309112220152D          

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M  END
> <DATABASE_ID>
NP0318016

> <DATABASE_NAME>
NP-MRD

> <SMILES>
C[C@@H]1O[C@@H](OC[C@H]2O[C@@H](OC3=C(OC4=CC(O)=CC(O)=C4C3=O)C3=CC=C(O)C=C3)[C@H](O)[C@@H](O)[C@@H]2O)[C@H](O)[C@H](O[C@@H]2O[C@@H](C)[C@H](OC(C)=O)[C@@H](OC(C)=O)[C@H]2OC(C)=O)[C@H]1OC(C)=O

> <INCHI_IDENTIFIER>
InChI=1S/C41H48O23/c1-14-32(57-16(3)42)36(64-41-38(60-19(6)45)37(59-18(5)44)33(15(2)56-41)58-17(4)43)31(53)39(55-14)54-13-25-27(49)29(51)30(52)40(62-25)63-35-28(50)26-23(48)11-22(47)12-24(26)61-34(35)20-7-9-21(46)10-8-20/h7-12,14-15,25,27,29-33,36-41,46-49,51-53H,13H2,1-6H3/t14-,15-,25+,27+,29-,30+,31+,32-,33-,36-,37+,38+,39+,40-,41-/m0/s1

> <INCHI_KEY>
KFDDVGSCUYDVLR-QRSXFULZSA-N

> <FORMULA>
C41H48O23

> <MOLECULAR_WEIGHT>
908.812

> <EXACT_MASS>
908.258637806

> <JCHEM_ACCEPTOR_COUNT>
19

> <JCHEM_ATOM_COUNT>
112

> <JCHEM_AVERAGE_POLARIZABILITY>
87.32659789054583

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
7

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2S,3S,4S,5R,6R)-6-{[(2R,3S,4S,5R,6S)-6-{[5,7-dihydroxy-2-(4-hydroxyphenyl)-4-oxo-4H-chromen-3-yl]oxy}-3,4,5-trihydroxyoxan-2-yl]methoxy}-5-hydroxy-2-methyl-4-{[(2S,3R,4R,5S,6S)-3,4,5-tris(acetyloxy)-6-methyloxan-2-yl]oxy}oxan-3-yl acetate

> <JCHEM_LOGP>
0.475380309000002

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
6

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
7.869690745547807

> <JCHEM_PKA_STRONGEST_ACIDIC>
6.372347975598481

> <JCHEM_PKA_STRONGEST_BASIC>
-3.64868604379133

> <JCHEM_POLAR_SURFACE_AREA>
328.48999999999995

> <JCHEM_REFRACTIVITY>
205.63980000000004

> <JCHEM_ROTATABLE_BOND_COUNT>
16

> <JCHEM_RULE_OF_FIVE>
0

> <JCHEM_TRADITIONAL_IUPAC>
(2S,3S,4S,5R,6R)-6-{[(2R,3S,4S,5R,6S)-6-{[5,7-dihydroxy-2-(4-hydroxyphenyl)-4-oxochromen-3-yl]oxy}-3,4,5-trihydroxyoxan-2-yl]methoxy}-5-hydroxy-2-methyl-4-{[(2S,3R,4R,5S,6S)-3,4,5-tris(acetyloxy)-6-methyloxan-2-yl]oxy}oxan-3-yl acetate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 11-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   11-SEP-22         0                                  
HETATM    1  C   UNK     0      10.669 -12.320   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       9.336 -11.550   0.000  0.00  0.00           C+0
HETATM    3  O   UNK     0       9.336 -10.010   0.000  0.00  0.00           O+0
HETATM    4  O   UNK     0       8.002 -12.320   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0       6.668 -11.550   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       6.668 -10.010   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       8.002  -9.240   0.000  0.00  0.00           C+0
HETATM    8  O   UNK     0       5.335  -9.240   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0       4.001 -10.010   0.000  0.00  0.00           C+0
HETATM   10  O   UNK     0       2.667  -9.240   0.000  0.00  0.00           O+0
HETATM   11  C   UNK     0       2.667  -7.700   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       1.334  -6.930   0.000  0.00  0.00           C+0
HETATM   13  O   UNK     0       1.334  -5.390   0.000  0.00  0.00           O+0
HETATM   14  C   UNK     0       0.000  -4.620   0.000  0.00  0.00           C+0
HETATM   15  O   UNK     0       0.000  -3.080   0.000  0.00  0.00           O+0
HETATM   16  C   UNK     0       1.334  -2.310   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       1.334  -0.770   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       0.000   0.000   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      -1.334  -0.770   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      -2.667  -0.000   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      -2.667   1.540   0.000  0.00  0.00           C+0
HETATM   22  O   UNK     0      -4.001   2.310   0.000  0.00  0.00           O+0
HETATM   23  C   UNK     0      -1.334   2.310   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       0.000   1.540   0.000  0.00  0.00           C+0
HETATM   25  O   UNK     0       2.667   0.000   0.000  0.00  0.00           O+0
HETATM   26  C   UNK     0       4.001  -0.770   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       5.335   0.000   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0       6.668  -0.770   0.000  0.00  0.00           C+0
HETATM   29  O   UNK     0       8.002  -0.000   0.000  0.00  0.00           O+0
HETATM   30  C   UNK     0       6.668  -2.310   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0       5.335  -3.080   0.000  0.00  0.00           C+0
HETATM   32  O   UNK     0       5.335  -4.620   0.000  0.00  0.00           O+0
HETATM   33  C   UNK     0       4.001  -2.310   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0       2.667  -3.080   0.000  0.00  0.00           C+0
HETATM   35  O   UNK     0       2.667  -4.620   0.000  0.00  0.00           O+0
HETATM   36  C   UNK     0      -1.334  -5.390   0.000  0.00  0.00           C+0
HETATM   37  O   UNK     0      -2.667  -4.620   0.000  0.00  0.00           O+0
HETATM   38  C   UNK     0      -1.334  -6.930   0.000  0.00  0.00           C+0
HETATM   39  O   UNK     0      -2.667  -7.700   0.000  0.00  0.00           O+0
HETATM   40  C   UNK     0       0.000  -7.700   0.000  0.00  0.00           C+0
HETATM   41  O   UNK     0       0.000  -9.240   0.000  0.00  0.00           O+0
HETATM   42  C   UNK     0       4.001 -11.550   0.000  0.00  0.00           C+0
HETATM   43  O   UNK     0       2.667 -12.320   0.000  0.00  0.00           O+0
HETATM   44  C   UNK     0       5.335 -12.320   0.000  0.00  0.00           C+0
HETATM   45  O   UNK     0       5.335 -13.860   0.000  0.00  0.00           O+0
HETATM   46  C   UNK     0       4.001 -14.630   0.000  0.00  0.00           C+0
HETATM   47  O   UNK     0       2.667 -13.860   0.000  0.00  0.00           O+0
HETATM   48  C   UNK     0       1.334 -14.630   0.000  0.00  0.00           C+0
HETATM   49  C   UNK     0       0.000 -13.860   0.000  0.00  0.00           C+0
HETATM   50  C   UNK     0       1.334 -16.170   0.000  0.00  0.00           C+0
HETATM   51  O   UNK     0      -0.000 -16.940   0.000  0.00  0.00           O+0
HETATM   52  C   UNK     0      -1.334 -16.170   0.000  0.00  0.00           C+0
HETATM   53  C   UNK     0      -1.334 -14.630   0.000  0.00  0.00           C+0
HETATM   54  O   UNK     0      -2.667 -16.940   0.000  0.00  0.00           O+0
HETATM   55  C   UNK     0       2.667 -16.940   0.000  0.00  0.00           C+0
HETATM   56  O   UNK     0       2.667 -18.480   0.000  0.00  0.00           O+0
HETATM   57  C   UNK     0       1.334 -19.250   0.000  0.00  0.00           C+0
HETATM   58  C   UNK     0       1.334 -20.790   0.000  0.00  0.00           C+0
HETATM   59  O   UNK     0      -0.000 -18.480   0.000  0.00  0.00           O+0
HETATM   60  C   UNK     0       4.001 -16.170   0.000  0.00  0.00           C+0
HETATM   61  O   UNK     0       5.335 -16.940   0.000  0.00  0.00           O+0
HETATM   62  C   UNK     0       5.335 -18.480   0.000  0.00  0.00           C+0
HETATM   63  C   UNK     0       4.001 -19.250   0.000  0.00  0.00           C+0
HETATM   64  O   UNK     0       6.668 -19.250   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3    4                                                  
CONECT    3    2                                                            
CONECT    4    2    5                                                       
CONECT    5    4    6   44                                                  
CONECT    6    5    7    8                                                  
CONECT    7    6                                                            
CONECT    8    6    9                                                       
CONECT    9    8   10   42                                                  
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13   40                                                  
CONECT   13   12   14                                                       
CONECT   14   13   15   36                                                  
CONECT   15   14   16                                                       
CONECT   16   15   17   34                                                  
CONECT   17   16   18   25                                                  
CONECT   18   17   19   24                                                  
CONECT   19   18   20                                                       
CONECT   20   19   21                                                       
CONECT   21   20   22   23                                                  
CONECT   22   21                                                            
CONECT   23   21   24                                                       
CONECT   24   23   18                                                       
CONECT   25   17   26                                                       
CONECT   26   25   27   33                                                  
CONECT   27   26   28                                                       
CONECT   28   27   29   30                                                  
CONECT   29   28                                                            
CONECT   30   28   31                                                       
CONECT   31   30   32   33                                                  
CONECT   32   31                                                            
CONECT   33   31   26   34                                                  
CONECT   34   33   16   35                                                  
CONECT   35   34                                                            
CONECT   36   14   37   38                                                  
CONECT   37   36                                                            
CONECT   38   36   39   40                                                  
CONECT   39   38                                                            
CONECT   40   38   12   41                                                  
CONECT   41   40                                                            
CONECT   42    9   43   44                                                  
CONECT   43   42                                                            
CONECT   44   42    5   45                                                  
CONECT   45   44   46                                                       
CONECT   46   45   47   60                                                  
CONECT   47   46   48                                                       
CONECT   48   47   49   50                                                  
CONECT   49   48                                                            
CONECT   50   48   51   55                                                  
CONECT   51   50   52                                                       
CONECT   52   51   53   54                                                  
CONECT   53   52                                                            
CONECT   54   52                                                            
CONECT   55   50   56   60                                                  
CONECT   56   55   57                                                       
CONECT   57   56   58   59                                                  
CONECT   58   57                                                            
CONECT   59   57                                                            
CONECT   60   55   46   61                                                  
CONECT   61   60   62                                                       
CONECT   62   61   63   64                                                  
CONECT   63   62                                                            
CONECT   64   62                                                            
MASTER        0    0    0    0    0    0    0    0   64    0  138    0
END

View in JSmol

Synonyms

Value	Source
(2S,3S,4S,5R,6R)-6-{[(2R,3S,4S,5R,6S)-6-{[5,7-dihydroxy-2-(4-hydroxyphenyl)-4-oxo-4H-chromen-3-yl]oxy}-3,4,5-trihydroxyoxan-2-yl]methoxy}-5-hydroxy-2-methyl-4-{[(2S,3R,4R,5S,6S)-3,4,5-tris(acetyloxy)-6-methyloxan-2-yl]oxy}oxan-3-yl acetic acid	Generator

Chemical Formula

C₄₁H₄₈O₂₃

Average Mass

908.8120 Da

Monoisotopic Mass

908.25864 Da

IUPAC Name

Traditional Name

(2S,3S,4S,5R,6R)-6-{[(2R,3S,4S,5R,6S)-6-{[5,7-dihydroxy-2-(4-hydroxyphenyl)-4-oxochromen-3-yl]oxy}-3,4,5-trihydroxyoxan-2-yl]methoxy}-5-hydroxy-2-methyl-4-{[(2S,3R,4R,5S,6S)-3,4,5-tris(acetyloxy)-6-methyloxan-2-yl]oxy}oxan-3-yl acetate

CAS Registry Number

Not Available

SMILES

C[C@@H]1O[C@@H](OC[C@H]2O[C@@H](OC3=C(OC4=CC(O)=CC(O)=C4C3=O)C3=CC=C(O)C=C3)[C@H](O)[C@@H](O)[C@@H]2O)[C@H](O)[C@H](O[C@@H]2O[C@@H](C)[C@H](OC(C)=O)[C@@H](OC(C)=O)[C@H]2OC(C)=O)[C@H]1OC(C)=O

InChI Identifier

InChI=1S/C41H48O23/c1-14-32(57-16(3)42)36(64-41-38(60-19(6)45)37(59-18(5)44)33(15(2)56-41)58-17(4)43)31(53)39(55-14)54-13-25-27(49)29(51)30(52)40(62-25)63-35-28(50)26-23(48)11-22(47)12-24(26)61-34(35)20-7-9-21(46)10-8-20/h7-12,14-15,25,27,29-33,36-41,46-49,51-53H,13H2,1-6H3/t14-,15-,25+,27+,29-,30+,31+,32-,33-,36-,37+,38+,39+,40-,41-/m0/s1

InChI Key

KFDDVGSCUYDVLR-QRSXFULZSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Camellia reticulata	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as flavonoid-3-o-glycosides. These are phenolic compounds containing a flavonoid moiety which is O-glycosidically linked to carbohydrate moiety at the C3-position.

Kingdom

Organic compounds

Super Class

Phenylpropanoids and polyketides

Class

Flavonoids

Sub Class

Flavonoid glycosides

Direct Parent

Flavonoid-3-O-glycosides

Alternative Parents

Substituents

Oligosaccharide
Flavonoid-3-o-glycoside
4'-hydroxyflavonoid
5-hydroxyflavonoid
7-hydroxyflavonoid
Hydroxyflavonoid
Flavone
Tetracarboxylic acid or derivatives
Glycosyl compound
O-glycosyl compound
Chromone
Benzopyran
1-benzopyran
1-hydroxy-2-unsubstituted benzenoid
Phenol
1-hydroxy-4-unsubstituted benzenoid
Pyranone
Monocyclic benzene moiety
Benzenoid
Pyran
Oxane
Vinylogous acid
Heteroaromatic compound
Secondary alcohol
Carboxylic acid ester
Organoheterocyclic compound
Oxacycle
Carboxylic acid derivative
Acetal
Polyol
Organic oxide
Carbonyl group
Organic oxygen compound
Alcohol
Hydrocarbon derivative
Organooxygen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	0.48	ChemAxon
pKa (Strongest Acidic)	6.37	ChemAxon
pKa (Strongest Basic)	-3.6	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	19	ChemAxon
Hydrogen Donor Count	7	ChemAxon
Polar Surface Area	328.49 Å²	ChemAxon
Rotatable Bond Count	16	ChemAxon
Refractivity	205.64 m³·mol⁻¹	ChemAxon
Polarizability	87.33 Å³	ChemAxon
Number of Rings	6	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

162986712

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (2s,3s,4s,5r,6r)-6-{[(2r,3s,4s,5r,6s)-6-{[5,7-dihydroxy-2-(4-hydroxyphenyl)-4-oxochromen-3-yl]oxy}-3,4,5-trihydroxyoxan-2-yl]methoxy}-5-hydroxy-2-methyl-4-{[(2s,3r,4r,5s,6s)-3,4,5-tris(acetyloxy)-6-methyloxan-2-yl]oxy}oxan-3-yl acetate (NP0318016)

MOL for NP0318016 ((2s,3s,4s,5r,6r)-6-{[(2r,3s,4s,5r,6s)-6-{[5,7-dihydroxy-2-(4-hydroxyphenyl)-4-oxochromen-3-yl]oxy}-3,4,5-trihydroxyoxan-2-yl]methoxy}-5-hydroxy-2-methyl-4-{[(2s,3r,4r,5s,6s)-3,4,5-tris(acetyloxy)-6-methyloxan-2-yl]oxy}oxan-3-yl acetate)

3D MOL for NP0318016 ((2s,3s,4s,5r,6r)-6-{[(2r,3s,4s,5r,6s)-6-{[5,7-dihydroxy-2-(4-hydroxyphenyl)-4-oxochromen-3-yl]oxy}-3,4,5-trihydroxyoxan-2-yl]methoxy}-5-hydroxy-2-methyl-4-{[(2s,3r,4r,5s,6s)-3,4,5-tris(acetyloxy)-6-methyloxan-2-yl]oxy}oxan-3-yl acetate)

3D SDF for NP0318016 ((2s,3s,4s,5r,6r)-6-{[(2r,3s,4s,5r,6s)-6-{[5,7-dihydroxy-2-(4-hydroxyphenyl)-4-oxochromen-3-yl]oxy}-3,4,5-trihydroxyoxan-2-yl]methoxy}-5-hydroxy-2-methyl-4-{[(2s,3r,4r,5s,6s)-3,4,5-tris(acetyloxy)-6-methyloxan-2-yl]oxy}oxan-3-yl acetate)

3D-SDF for NP0318016 ((2s,3s,4s,5r,6r)-6-{[(2r,3s,4s,5r,6s)-6-{[5,7-dihydroxy-2-(4-hydroxyphenyl)-4-oxochromen-3-yl]oxy}-3,4,5-trihydroxyoxan-2-yl]methoxy}-5-hydroxy-2-methyl-4-{[(2s,3r,4r,5s,6s)-3,4,5-tris(acetyloxy)-6-methyloxan-2-yl]oxy}oxan-3-yl acetate)

PDB for NP0318016 ((2s,3s,4s,5r,6r)-6-{[(2r,3s,4s,5r,6s)-6-{[5,7-dihydroxy-2-(4-hydroxyphenyl)-4-oxochromen-3-yl]oxy}-3,4,5-trihydroxyoxan-2-yl]methoxy}-5-hydroxy-2-methyl-4-{[(2s,3r,4r,5s,6s)-3,4,5-tris(acetyloxy)-6-methyloxan-2-yl]oxy}oxan-3-yl acetate)

3D PDB for NP0318016 ((2s,3s,4s,5r,6r)-6-{[(2r,3s,4s,5r,6s)-6-{[5,7-dihydroxy-2-(4-hydroxyphenyl)-4-oxochromen-3-yl]oxy}-3,4,5-trihydroxyoxan-2-yl]methoxy}-5-hydroxy-2-methyl-4-{[(2s,3r,4r,5s,6s)-3,4,5-tris(acetyloxy)-6-methyloxan-2-yl]oxy}oxan-3-yl acetate)

SMILES for NP0318016 ((2s,3s,4s,5r,6r)-6-{[(2r,3s,4s,5r,6s)-6-{[5,7-dihydroxy-2-(4-hydroxyphenyl)-4-oxochromen-3-yl]oxy}-3,4,5-trihydroxyoxan-2-yl]methoxy}-5-hydroxy-2-methyl-4-{[(2s,3r,4r,5s,6s)-3,4,5-tris(acetyloxy)-6-methyloxan-2-yl]oxy}oxan-3-yl acetate)

INCHI for NP0318016 ((2s,3s,4s,5r,6r)-6-{[(2r,3s,4s,5r,6s)-6-{[5,7-dihydroxy-2-(4-hydroxyphenyl)-4-oxochromen-3-yl]oxy}-3,4,5-trihydroxyoxan-2-yl]methoxy}-5-hydroxy-2-methyl-4-{[(2s,3r,4r,5s,6s)-3,4,5-tris(acetyloxy)-6-methyloxan-2-yl]oxy}oxan-3-yl acetate)

Structure for NP0318016 ((2s,3s,4s,5r,6r)-6-{[(2r,3s,4s,5r,6s)-6-{[5,7-dihydroxy-2-(4-hydroxyphenyl)-4-oxochromen-3-yl]oxy}-3,4,5-trihydroxyoxan-2-yl]methoxy}-5-hydroxy-2-methyl-4-{[(2s,3r,4r,5s,6s)-3,4,5-tris(acetyloxy)-6-methyloxan-2-yl]oxy}oxan-3-yl acetate)

3D Structure for NP0318016 ((2s,3s,4s,5r,6r)-6-{[(2r,3s,4s,5r,6s)-6-{[5,7-dihydroxy-2-(4-hydroxyphenyl)-4-oxochromen-3-yl]oxy}-3,4,5-trihydroxyoxan-2-yl]methoxy}-5-hydroxy-2-methyl-4-{[(2s,3r,4r,5s,6s)-3,4,5-tris(acetyloxy)-6-methyloxan-2-yl]oxy}oxan-3-yl acetate)