NP-MRD: Showing NP-Card for (2r,3s,4s,5r,6s)-2-({[(2r,3r,4r,5s)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}methyl)-6-(4-hydroxy-3-methoxyphenoxy)oxane-3,4,5-triol (NP0318003)

Jump To Section:

Identification Spectra BioTaxonomy ChemoTaxonomy Physical properties Links References XML

Record Information

Version

2.0

Created at

2022-09-11 18:13:53 UTC

Updated at

2022-09-11 18:13:53 UTC

NP-MRD ID

NP0318003

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(2r,3s,4s,5r,6s)-2-({[(2r,3r,4r,5s)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}methyl)-6-(4-hydroxy-3-methoxyphenoxy)oxane-3,4,5-triol

Description

Rhyncoside A belongs to the class of organic compounds known as phenolic glycosides. These are organic compounds containing a phenolic structure attached to a glycosyl moiety. Some examples of phenolic structures include lignans, and flavonoids. Among the sugar units found in natural glycosides are D-glucose, L-Fructose, and L rhamnose. (2r,3s,4s,5r,6s)-2-({[(2r,3r,4r,5s)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}methyl)-6-(4-hydroxy-3-methoxyphenoxy)oxane-3,4,5-triol is found in Bruguiera rhynchopetala. Based on a literature review very few articles have been published on Rhyncoside A.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309112220132D          

 30 32  0  0  1  0            999 V2000
   -0.6078    9.3027    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6078    8.4777    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3222    8.0652    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3222    7.2402    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0367    6.8277    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0367    6.0027    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7512    5.5902    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.7512    4.7652    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4656    4.3527    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.4656    3.5277    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7512    3.1152    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7512    2.2902    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.0837    1.8053    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3387    1.0206    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.8538    0.3532    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1893   -0.4005    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1637    1.0206    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.6486    0.3532    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4186    1.8053    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.2032    2.0602    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1801    4.7652    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.8946    4.3527    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1801    5.5902    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.8946    6.0027    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4656    6.0027    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.4656    6.8277    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7512    7.2402    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7512    8.0652    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0367    8.4777    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0367    9.3027    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  7  6  1  6  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  6  0  0  0
 10 11  1  0  0  0  0
 12 11  1  6  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  1  0  0  0
 15 16  1  0  0  0  0
 14 17  1  0  0  0  0
 17 18  1  6  0  0  0
 17 19  1  0  0  0  0
 12 19  1  0  0  0  0
 19 20  1  1  0  0  0
  9 21  1  0  0  0  0
 21 22  1  1  0  0  0
 21 23  1  0  0  0  0
 23 24  1  6  0  0  0
 23 25  1  0  0  0  0
  7 25  1  0  0  0  0
 25 26  1  1  0  0  0
  5 27  2  0  0  0  0
 27 28  1  0  0  0  0
 28 29  2  0  0  0  0
  3 29  1  0  0  0  0
 29 30  1  0  0  0  0
M  END

     RDKit          3D

 56 58  0  0  0  0  0  0  0  0999 V2000
   -5.6090    1.7274   -1.9024 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0633    0.4243   -2.2192 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3655   -0.6457   -1.6752 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2603   -0.4682   -0.8484 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5428   -1.4981   -0.2904 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4502   -1.3297    0.5271 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8635   -0.1360    0.9463 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.5613   -0.1265    0.4597 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1077    1.0523    0.7767 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.4610    1.0280    0.0978 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2327   -0.0382    0.5049 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.4463    0.0203   -0.1648 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.7379   -1.1511   -0.8557 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0729   -1.0629   -1.1750 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.1883   -0.4131   -2.5428 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5238   -0.2865   -2.9450 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7689   -0.2562   -0.1147 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.7767   -0.9442    0.5297 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.6066    0.0525    0.8370 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.7633    1.2975    1.3976 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.3717    1.0096    2.2734 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.1379    2.0746    2.7026 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9516    1.0473    2.9623 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.8317    0.8803    4.3454 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9213    0.0151    2.4451 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.2005    0.4317    2.8134 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0000   -2.7844   -0.6099 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0805   -3.0238   -1.4169 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7586   -1.9382   -1.9464 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8720   -2.1004   -2.7796 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2633    2.5107   -2.3344 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6093    1.8050   -0.7776 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5603    1.8903   -2.2265 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9963    0.5607   -0.6691 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4205    0.7128    0.5136 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4660    1.9631    0.5240 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9754    1.9762    0.3690 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2957    1.0362   -1.0032 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5266    0.8756   -0.8528 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5760   -2.0609   -1.1967 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7268    0.5888   -2.5377 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6439   -1.0492   -3.2693 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.0284    0.2341   -2.2747 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.1113    0.7214   -0.5201 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.6498   -0.5929    0.1959 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4750   -0.7617    1.5590 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0675    1.4043    2.0904 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8894    0.0259    2.4566 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0064    2.8633    2.1030 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4113    2.0443    2.7652 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1219    0.6979    4.5218 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7262   -0.9384    2.9751 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4099    1.2877    2.3520 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4458   -3.6199   -0.1782 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4405   -4.0054   -1.6691 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2077   -3.0276   -3.0145 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 14 17  1  0
 17 18  1  0
 17 19  1  0
 19 20  1  0
  9 21  1  0
 21 22  1  0
 21 23  1  0
 23 24  1  0
 23 25  1  0
 25 26  1  0
  5 27  2  0
 27 28  1  0
 28 29  2  0
 29 30  1  0
 29  3  1  0
 25  7  1  0
 19 12  1  0
  1 31  1  0
  1 32  1  0
  1 33  1  0
  4 34  1  0
  7 35  1  6
  9 36  1  1
 10 37  1  0
 10 38  1  0
 12 39  1  6
 14 40  1  6
 15 41  1  0
 15 42  1  0
 16 43  1  0
 17 44  1  6
 18 45  1  0
 19 46  1  1
 20 47  1  0
 21 48  1  6
 22 49  1  0
 23 50  1  1
 24 51  1  0
 25 52  1  1
 26 53  1  0
 27 54  1  0
 28 55  1  0
 30 56  1  0
M  END


  Mrv1652309112220132D          

 30 32  0  0  1  0            999 V2000
   -0.6078    9.3027    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6078    8.4777    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3222    8.0652    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3222    7.2402    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0367    6.8277    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0367    6.0027    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7512    5.5902    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.7512    4.7652    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4656    4.3527    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.4656    3.5277    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7512    3.1152    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7512    2.2902    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.0837    1.8053    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3387    1.0206    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.8538    0.3532    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1893   -0.4005    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1637    1.0206    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.6486    0.3532    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4186    1.8053    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.2032    2.0602    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1801    4.7652    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.8946    4.3527    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1801    5.5902    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.8946    6.0027    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4656    6.0027    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.4656    6.8277    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7512    7.2402    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7512    8.0652    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0367    8.4777    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0367    9.3027    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  7  6  1  6  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  6  0  0  0
 10 11  1  0  0  0  0
 12 11  1  6  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  1  0  0  0
 15 16  1  0  0  0  0
 14 17  1  0  0  0  0
 17 18  1  6  0  0  0
 17 19  1  0  0  0  0
 12 19  1  0  0  0  0
 19 20  1  1  0  0  0
  9 21  1  0  0  0  0
 21 22  1  1  0  0  0
 21 23  1  0  0  0  0
 23 24  1  6  0  0  0
 23 25  1  0  0  0  0
  7 25  1  0  0  0  0
 25 26  1  1  0  0  0
  5 27  2  0  0  0  0
 27 28  1  0  0  0  0
 28 29  2  0  0  0  0
  3 29  1  0  0  0  0
 29 30  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0318003

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC1=CC(O[C@@H]2O[C@H](CO[C@@H]3O[C@@H](CO)[C@H](O)[C@H]3O)[C@@H](O)[C@H](O)[C@H]2O)=CC=C1O

> <INCHI_IDENTIFIER>
InChI=1S/C18H26O12/c1-26-9-4-7(2-3-8(9)20)28-18-16(25)14(23)13(22)11(30-18)6-27-17-15(24)12(21)10(5-19)29-17/h2-4,10-25H,5-6H2,1H3/t10-,11+,12-,13+,14-,15+,16+,17+,18+/m0/s1

> <INCHI_KEY>
HBDPPXYSTUTNOM-JRMMIJPGSA-N

> <FORMULA>
C18H26O12

> <MOLECULAR_WEIGHT>
434.394

> <EXACT_MASS>
434.142426277

> <JCHEM_ACCEPTOR_COUNT>
12

> <JCHEM_ATOM_COUNT>
56

> <JCHEM_AVERAGE_POLARIZABILITY>
41.15741793953056

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
7

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2R,3S,4S,5R,6S)-2-({[(2R,3R,4R,5S)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}methyl)-6-(4-hydroxy-3-methoxyphenoxy)oxane-3,4,5-triol

> <JCHEM_LOGP>
-2.2001248899999997

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
11.943485547628255

> <JCHEM_PKA_STRONGEST_ACIDIC>
10.259868468176942

> <JCHEM_PKA_STRONGEST_BASIC>
-2.981143337099244

> <JCHEM_POLAR_SURFACE_AREA>
187.76

> <JCHEM_REFRACTIVITY>
95.07820000000001

> <JCHEM_ROTATABLE_BOND_COUNT>
7

> <JCHEM_RULE_OF_FIVE>
0

> <JCHEM_TRADITIONAL_IUPAC>
(2R,3S,4S,5R,6S)-2-({[(2R,3R,4R,5S)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}methyl)-6-(4-hydroxy-3-methoxyphenoxy)oxane-3,4,5-triol

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 11-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   11-SEP-22         0                                  
HETATM    1  C   UNK     0      -1.134  17.365   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0      -1.134  15.825   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0      -2.468  15.055   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -2.468  13.515   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      -3.802  12.745   0.000  0.00  0.00           C+0
HETATM    6  O   UNK     0      -3.802  11.205   0.000  0.00  0.00           O+0
HETATM    7  C   UNK     0      -5.136  10.435   0.000  0.00  0.00           C+0
HETATM    8  O   UNK     0      -5.136   8.895   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0      -6.469   8.125   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      -6.469   6.585   0.000  0.00  0.00           C+0
HETATM   11  O   UNK     0      -5.136   5.815   0.000  0.00  0.00           O+0
HETATM   12  C   UNK     0      -5.136   4.275   0.000  0.00  0.00           C+0
HETATM   13  O   UNK     0      -3.890   3.370   0.000  0.00  0.00           O+0
HETATM   14  C   UNK     0      -4.366   1.905   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      -3.460   0.659   0.000  0.00  0.00           C+0
HETATM   16  O   UNK     0      -4.087  -0.748   0.000  0.00  0.00           O+0
HETATM   17  C   UNK     0      -5.906   1.905   0.000  0.00  0.00           C+0
HETATM   18  O   UNK     0      -6.811   0.659   0.000  0.00  0.00           O+0
HETATM   19  C   UNK     0      -6.381   3.370   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0      -7.846   3.846   0.000  0.00  0.00           O+0
HETATM   21  C   UNK     0      -7.803   8.895   0.000  0.00  0.00           C+0
HETATM   22  O   UNK     0      -9.137   8.125   0.000  0.00  0.00           O+0
HETATM   23  C   UNK     0      -7.803  10.435   0.000  0.00  0.00           C+0
HETATM   24  O   UNK     0      -9.137  11.205   0.000  0.00  0.00           O+0
HETATM   25  C   UNK     0      -6.469  11.205   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0      -6.469  12.745   0.000  0.00  0.00           O+0
HETATM   27  C   UNK     0      -5.136  13.515   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0      -5.136  15.055   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0      -3.802  15.825   0.000  0.00  0.00           C+0
HETATM   30  O   UNK     0      -3.802  17.365   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4   29                                                  
CONECT    4    3    5                                                       
CONECT    5    4    6   27                                                  
CONECT    6    5    7                                                       
CONECT    7    6    8   25                                                  
CONECT    8    7    9                                                       
CONECT    9    8   10   21                                                  
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13   19                                                  
CONECT   13   12   14                                                       
CONECT   14   13   15   17                                                  
CONECT   15   14   16                                                       
CONECT   16   15                                                            
CONECT   17   14   18   19                                                  
CONECT   18   17                                                            
CONECT   19   17   12   20                                                  
CONECT   20   19                                                            
CONECT   21    9   22   23                                                  
CONECT   22   21                                                            
CONECT   23   21   24   25                                                  
CONECT   24   23                                                            
CONECT   25   23    7   26                                                  
CONECT   26   25                                                            
CONECT   27    5   28                                                       
CONECT   28   27   29                                                       
CONECT   29   28    3   30                                                  
CONECT   30   29                                                            
MASTER        0    0    0    0    0    0    0    0   30    0   64    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₁₈H₂₆O₁₂

Average Mass

434.3940 Da

Monoisotopic Mass

434.14243 Da

IUPAC Name

Not Available

Traditional Name

Not Available

CAS Registry Number

Not Available

SMILES

COC1=CC(O[C@@H]2O[C@H](CO[C@@H]3O[C@@H](CO)[C@H](O)[C@H]3O)[C@@H](O)[C@H](O)[C@H]2O)=CC=C1O

InChI Identifier

InChI=1S/C18H26O12/c1-26-9-4-7(2-3-8(9)20)28-18-16(25)14(23)13(22)11(30-18)6-27-17-15(24)12(21)10(5-19)29-17/h2-4,10-25H,5-6H2,1H3/t10-,11+,12-,13+,14-,15+,16+,17+,18+/m0/s1

InChI Key

HBDPPXYSTUTNOM-JRMMIJPGSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Bruguiera x rhynchopetala	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as phenolic glycosides. These are organic compounds containing a phenolic structure attached to a glycosyl moiety. Some examples of phenolic structures include lignans, and flavonoids. Among the sugar units found in natural glycosides are D-glucose, L-Fructose, and L rhamnose.

Kingdom

Organic compounds

Super Class

Organic oxygen compounds

Class

Organooxygen compounds

Sub Class

Carbohydrates and carbohydrate conjugates

Direct Parent

Phenolic glycosides

Alternative Parents

Substituents

Phenolic glycoside
Disaccharide
O-glycosyl compound
Methoxyphenol
4-alkoxyphenol
Anisole
Phenoxy compound
Phenol ether
Methoxybenzene
1-hydroxy-2-unsubstituted benzenoid
Alkyl aryl ether
Phenol
Oxane
Monocyclic benzene moiety
Benzenoid
Oxolane
Secondary alcohol
Organoheterocyclic compound
Acetal
Oxacycle
Ether
Polyol
Hydrocarbon derivative
Alcohol
Primary alcohol
Aromatic heteromonocyclic compound

Molecular Framework

Aromatic heteromonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00031166

Chemspider ID

29213910

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

17757438

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (2r,3s,4s,5r,6s)-2-({[(2r,3r,4r,5s)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}methyl)-6-(4-hydroxy-3-methoxyphenoxy)oxane-3,4,5-triol (NP0318003)

MOL for NP0318003 ((2r,3s,4s,5r,6s)-2-({[(2r,3r,4r,5s)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}methyl)-6-(4-hydroxy-3-methoxyphenoxy)oxane-3,4,5-triol)

3D MOL for NP0318003 ((2r,3s,4s,5r,6s)-2-({[(2r,3r,4r,5s)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}methyl)-6-(4-hydroxy-3-methoxyphenoxy)oxane-3,4,5-triol)

3D SDF for NP0318003 ((2r,3s,4s,5r,6s)-2-({[(2r,3r,4r,5s)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}methyl)-6-(4-hydroxy-3-methoxyphenoxy)oxane-3,4,5-triol)

3D-SDF for NP0318003 ((2r,3s,4s,5r,6s)-2-({[(2r,3r,4r,5s)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}methyl)-6-(4-hydroxy-3-methoxyphenoxy)oxane-3,4,5-triol)

PDB for NP0318003 ((2r,3s,4s,5r,6s)-2-({[(2r,3r,4r,5s)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}methyl)-6-(4-hydroxy-3-methoxyphenoxy)oxane-3,4,5-triol)

3D PDB for NP0318003 ((2r,3s,4s,5r,6s)-2-({[(2r,3r,4r,5s)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}methyl)-6-(4-hydroxy-3-methoxyphenoxy)oxane-3,4,5-triol)

SMILES for NP0318003 ((2r,3s,4s,5r,6s)-2-({[(2r,3r,4r,5s)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}methyl)-6-(4-hydroxy-3-methoxyphenoxy)oxane-3,4,5-triol)

INCHI for NP0318003 ((2r,3s,4s,5r,6s)-2-({[(2r,3r,4r,5s)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}methyl)-6-(4-hydroxy-3-methoxyphenoxy)oxane-3,4,5-triol)

Structure for NP0318003 ((2r,3s,4s,5r,6s)-2-({[(2r,3r,4r,5s)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}methyl)-6-(4-hydroxy-3-methoxyphenoxy)oxane-3,4,5-triol)

3D Structure for NP0318003 ((2r,3s,4s,5r,6s)-2-({[(2r,3r,4r,5s)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}methyl)-6-(4-hydroxy-3-methoxyphenoxy)oxane-3,4,5-triol)