NP-MRD: Showing NP-Card for (3s,4r,7s,8r,12r)-3,8-dihydroxy-4,8,12-trimethyl-15-methylidene-13,18-dioxatricyclo[10.3.2.1⁴,⁷]octadecane-11,14-dione (NP0316550)

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Record Information

Version

2.0

Created at

2022-09-11 15:49:12 UTC

Updated at

2022-09-11 15:49:13 UTC

NP-MRD ID

NP0316550

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(3s,4r,7s,8r,12r)-3,8-dihydroxy-4,8,12-trimethyl-15-methylidene-13,18-dioxatricyclo[10.3.2.1⁴,⁷]octadecane-11,14-dione

Description

Sinulariolone belongs to the class of organic compounds known as macrolides and analogues. These are organic compounds containing a lactone ring of at least twelve members. (3s,4r,7s,8r,12r)-3,8-dihydroxy-4,8,12-trimethyl-15-methylidene-13,18-dioxatricyclo[10.3.2.1⁴,⁷]octadecane-11,14-dione is found in Sinularia flexibilis. (3s,4r,7s,8r,12r)-3,8-dihydroxy-4,8,12-trimethyl-15-methylidene-13,18-dioxatricyclo[10.3.2.1⁴,⁷]octadecane-11,14-dione was first documented in 2008 (PMID: 18553926). Based on a literature review very few articles have been published on Sinulariolone.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309112217492D          

 26 28  0  0  1  0            999 V2000
    6.8864   -0.3519    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6372    0.4345    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2377    1.0003    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.0079    0.7048    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.1697    1.8225    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.4845    2.2820    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    7.0651    2.8681    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6980    2.0328    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4025    1.2625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8205    0.5512    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8639   -0.0467    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0636    0.1538    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.6774   -0.5752    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.4482    0.7033    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.0797   -0.0349    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6392    0.8649    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5429    1.6843    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2924    2.0290    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.8519    1.4228    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7325    2.9715    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.9146    3.0796    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5896    3.7841    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.4644    3.3521    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2894    3.3490    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0185    2.9628    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5679    3.5782    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  3  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  1  0  0  0
  6  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
  2 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  6  0  0  0
 12 14  1  0  0  0  0
 14 15  1  6  0  0  0
 14 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  1  0  0  0
 14 19  1  0  0  0  0
 18 20  1  0  0  0  0
 20 21  1  1  0  0  0
 20 22  1  6  0  0  0
 20 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
  6 25  1  0  0  0  0
 25 26  2  0  0  0  0
M  END

     RDKit          3D

 56 58  0  0  0  0  0  0  0  0999 V2000
   -2.2514   -2.0887   -2.6835 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9063   -1.3524   -1.6538 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0748   -0.1953   -1.9531 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5748   -0.0301   -3.0685 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8515    0.7285   -0.9478 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7117    1.3872   -0.0883 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.4998    1.3789    1.3911 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0408    0.7480   -0.2813 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1069   -0.6318    0.3684 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3741   -1.7448   -0.2572 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.3826   -2.5582    0.4377 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1706   -2.2914    1.1134 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.3612   -1.9682    2.4973 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0558   -1.5967    0.7036 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.2203   -2.0979    1.6428 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6340   -1.7553   -0.6310 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3074   -0.4421   -0.9175 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1700    0.3427    0.3422 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.1138   -0.2340    0.9918 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.0274    1.8290    0.1867 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.4951    2.2570   -0.1649 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8807    2.3852    1.4564 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0843    2.4161   -0.7846 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0472    3.2471   -0.2966 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4492    2.7615   -0.4945 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3540    3.4238   -0.9593 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9420   -1.8446   -3.6790 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8551   -2.9560   -2.5433 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3380    0.3871    1.8321 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4668    1.6918    1.9272 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7541    2.0691    1.7620 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2164    0.5890   -1.3584 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8098    1.3651    0.1659 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2415   -0.8124    0.3108 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0227   -0.5813    1.4858 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1938   -2.4967   -0.5645 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1839   -3.4255   -0.3090 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0225   -3.1838    1.1805 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2516   -3.3788    1.3394 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1635   -1.2055    2.7754 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1883   -1.9183    1.1965 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0897   -3.1823    1.8065 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1408   -1.5904    2.6180 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4653   -2.5359   -0.6774 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9541   -2.1055   -1.4284 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7728    0.0169   -1.7799 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3931   -0.5969   -1.1946 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1442    0.1426    0.8990 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1576    1.8202    0.5802 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4844    3.3599   -0.1480 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6739    1.9145   -1.2051 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5839    1.6640    2.0614 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7471    3.2420   -1.2919 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9144    1.8322   -1.7124 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1779    3.5139    0.7655 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0882    4.2875   -0.7641 H   0  0  0  0  0  0  0  0  0  0  0  0
 14 15  1  1
 14 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 18 20  1  0
 20 21  1  0
 20 22  1  1
 20 23  1  0
 23 24  1  0
 24 25  1  0
 25 26  2  0
 25  6  1  0
  6  7  1  1
  6  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 10  2  1  0
  2  1  2  3
  2  3  1  0
  3  4  2  0
  3  5  1  0
 19 14  1  0
  5  6  1  0
 12 14  1  0
 15 41  1  0
 15 42  1  0
 15 43  1  0
 16 44  1  0
 16 45  1  0
 17 46  1  0
 17 47  1  0
 18 48  1  1
 21 49  1  0
 21 50  1  0
 21 51  1  0
 22 52  1  0
 23 53  1  0
 23 54  1  0
 24 55  1  0
 24 56  1  0
  7 29  1  0
  7 30  1  0
  7 31  1  0
  8 32  1  0
  8 33  1  0
  9 34  1  0
  9 35  1  0
 10 36  1  6
 11 37  1  0
 11 38  1  0
 12 39  1  1
 13 40  1  0
  1 27  1  0
  1 28  1  0
M  END


  Mrv1652309112217492D          

 26 28  0  0  1  0            999 V2000
    6.8864   -0.3519    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6372    0.4345    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2377    1.0003    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.0079    0.7048    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.1697    1.8225    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.4845    2.2820    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    7.0651    2.8681    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6980    2.0328    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4025    1.2625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8205    0.5512    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8639   -0.0467    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0636    0.1538    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.6774   -0.5752    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.4482    0.7033    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.0797   -0.0349    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6392    0.8649    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5429    1.6843    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2924    2.0290    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.8519    1.4228    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7325    2.9715    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.9146    3.0796    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5896    3.7841    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.4644    3.3521    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2894    3.3490    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0185    2.9628    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5679    3.5782    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  3  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  1  0  0  0
  6  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
  2 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  6  0  0  0
 12 14  1  0  0  0  0
 14 15  1  6  0  0  0
 14 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  1  0  0  0
 14 19  1  0  0  0  0
 18 20  1  0  0  0  0
 20 21  1  1  0  0  0
 20 22  1  6  0  0  0
 20 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
  6 25  1  0  0  0  0
 25 26  2  0  0  0  0
M  END
> <DATABASE_ID>
NP0316550

> <DATABASE_NAME>
NP-MRD

> <SMILES>
C[C@]12CC[C@H](O1)[C@](C)(O)CCC(=O)[C@@]1(C)CCC(C[C@@H]2O)C(=C)C(=O)O1

> <INCHI_IDENTIFIER>
InChI=1S/C20H30O6/c1-12-13-5-9-19(3,26-17(12)23)14(21)6-8-18(2,24)16-7-10-20(4,25-16)15(22)11-13/h13,15-16,22,24H,1,5-11H2,2-4H3/t13?,15-,16-,18+,19+,20+/m0/s1

> <INCHI_KEY>
MMFMKUFASHHEIN-DSRRDPKTSA-N

> <FORMULA>
C20H30O6

> <MOLECULAR_WEIGHT>
366.454

> <EXACT_MASS>
366.204238686

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
56

> <JCHEM_AVERAGE_POLARIZABILITY>
38.575205722737444

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(3S,4R,7S,8R,12R)-3,8-dihydroxy-4,8,12-trimethyl-15-methylidene-13,18-dioxatricyclo[10.3.2.1^{4,7}]octadecane-11,14-dione

> <JCHEM_LOGP>
2.166514294666667

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
14.30913735801165

> <JCHEM_PKA_STRONGEST_ACIDIC>
13.70612969307906

> <JCHEM_PKA_STRONGEST_BASIC>
-3.219116842211977

> <JCHEM_POLAR_SURFACE_AREA>
93.06

> <JCHEM_REFRACTIVITY>
94.7899

> <JCHEM_ROTATABLE_BOND_COUNT>
0

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
(3S,4R,7S,8R,12R)-3,8-dihydroxy-4,8,12-trimethyl-15-methylidene-13,18-dioxatricyclo[10.3.2.1^{4,7}]octadecane-11,14-dione

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 11-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   11-SEP-22         0                                  
HETATM    1  C   UNK     0      12.855  -0.657   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      12.389   0.811   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      13.510   1.867   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0      14.948   1.316   0.000  0.00  0.00           O+0
HETATM    5  O   UNK     0      13.383   3.402   0.000  0.00  0.00           O+0
HETATM    6  C   UNK     0      12.104   4.260   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      13.188   5.354   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      10.636   3.795   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      10.085   2.357   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      10.865   1.029   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       9.079  -0.087   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       7.585   0.287   0.000  0.00  0.00           C+0
HETATM   13  O   UNK     0       6.865  -1.074   0.000  0.00  0.00           O+0
HETATM   14  C   UNK     0       6.437   1.313   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       5.749  -0.065   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       4.927   1.614   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       4.747   3.144   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       6.146   3.788   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0       7.190   2.656   0.000  0.00  0.00           O+0
HETATM   20  C   UNK     0       6.967   5.547   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       5.441   5.749   0.000  0.00  0.00           C+0
HETATM   22  O   UNK     0       6.701   7.064   0.000  0.00  0.00           O+0
HETATM   23  C   UNK     0       8.334   6.257   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       9.874   6.251   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      11.234   5.530   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0      12.260   6.679   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3   10                                                  
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3    6                                                       
CONECT    6    5    7    8   25                                             
CONECT    7    6                                                            
CONECT    8    6    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9    2   11                                                  
CONECT   11   10   12                                                       
CONECT   12   11   13   14                                                  
CONECT   13   12                                                            
CONECT   14   12   15   16   19                                             
CONECT   15   14                                                            
CONECT   16   14   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   19   20                                                  
CONECT   19   18   14                                                       
CONECT   20   18   21   22   23                                             
CONECT   21   20                                                            
CONECT   22   20                                                            
CONECT   23   20   24                                                       
CONECT   24   23   25                                                       
CONECT   25   24    6   26                                                  
CONECT   26   25                                                            
MASTER        0    0    0    0    0    0    0    0   26    0   56    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₀H₃₀O₆

Average Mass

366.4540 Da

Monoisotopic Mass

366.20424 Da

IUPAC Name

(3S,4R,7S,8R,12R)-3,8-dihydroxy-4,8,12-trimethyl-15-methylidene-13,18-dioxatricyclo[10.3.2.1^{4,7}]octadecane-11,14-dione

Traditional Name

(3S,4R,7S,8R,12R)-3,8-dihydroxy-4,8,12-trimethyl-15-methylidene-13,18-dioxatricyclo[10.3.2.1^{4,7}]octadecane-11,14-dione

CAS Registry Number

Not Available

SMILES

C[C@]12CC[C@H](O1)[C@](C)(O)CCC(=O)[C@@]1(C)CCC(C[C@@H]2O)C(=C)C(=O)O1

InChI Identifier

InChI=1S/C20H30O6/c1-12-13-5-9-19(3,26-17(12)23)14(21)6-8-18(2,24)16-7-10-20(4,25-16)15(22)11-13/h13,15-16,22,24H,1,5-11H2,2-4H3/t13?,15-,16-,18+,19+,20+/m0/s1

InChI Key

MMFMKUFASHHEIN-DSRRDPKTSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Sinularia flexibilis	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as macrolides and analogues. These are organic compounds containing a lactone ring of at least twelve members.

Kingdom

Organic compounds

Super Class

Phenylpropanoids and polyketides

Class

Macrolides and analogues

Sub Class

Not Available

Direct Parent

Macrolides and analogues

Alternative Parents

Substituents

Macrolide
Caprolactone
Alpha-acyloxy ketone
Oxepane
Alpha,beta-unsaturated carboxylic ester
Enoate ester
Tertiary alcohol
Oxolane
Carboxylic acid ester
Ketone
Lactone
Secondary alcohol
Carboxylic acid derivative
Dialkyl ether
Ether
Oxacycle
Organoheterocyclic compound
Monocarboxylic acid or derivatives
Organic oxygen compound
Hydrocarbon derivative
Carbonyl group
Alcohol
Organic oxide
Organooxygen compound
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.17	ChemAxon
pKa (Strongest Acidic)	13.71	ChemAxon
pKa (Strongest Basic)	-3.2	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	93.06 Å²	ChemAxon
Rotatable Bond Count	0	ChemAxon
Refractivity	94.79 m³·mol⁻¹	ChemAxon
Polarizability	38.58 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00040317

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

101932775

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Wen T, Ding Y, Deng Z, van Ofwegen L, Proksch P, Lin W: Sinulaflexiolides A-K, cembrane-type diterpenoids from the chinese soft coral Sinularia flexibilis. J Nat Prod. 2008 Jul;71(7):1133-40. doi: 10.1021/np070640g. Epub 2008 Jun 14. [PubMed:18553926 ]
LOTUS database [Link]

Showing NP-Card for (3s,4r,7s,8r,12r)-3,8-dihydroxy-4,8,12-trimethyl-15-methylidene-13,18-dioxatricyclo[10.3.2.1⁴,⁷]octadecane-11,14-dione (NP0316550)

MOL for NP0316550 ((3s,4r,7s,8r,12r)-3,8-dihydroxy-4,8,12-trimethyl-15-methylidene-13,18-dioxatricyclo[10.3.2.1⁴,⁷]octadecane-11,14-dione)

3D MOL for NP0316550 ((3s,4r,7s,8r,12r)-3,8-dihydroxy-4,8,12-trimethyl-15-methylidene-13,18-dioxatricyclo[10.3.2.1⁴,⁷]octadecane-11,14-dione)

3D SDF for NP0316550 ((3s,4r,7s,8r,12r)-3,8-dihydroxy-4,8,12-trimethyl-15-methylidene-13,18-dioxatricyclo[10.3.2.1⁴,⁷]octadecane-11,14-dione)

3D-SDF for NP0316550 ((3s,4r,7s,8r,12r)-3,8-dihydroxy-4,8,12-trimethyl-15-methylidene-13,18-dioxatricyclo[10.3.2.1⁴,⁷]octadecane-11,14-dione)

PDB for NP0316550 ((3s,4r,7s,8r,12r)-3,8-dihydroxy-4,8,12-trimethyl-15-methylidene-13,18-dioxatricyclo[10.3.2.1⁴,⁷]octadecane-11,14-dione)

3D PDB for NP0316550 ((3s,4r,7s,8r,12r)-3,8-dihydroxy-4,8,12-trimethyl-15-methylidene-13,18-dioxatricyclo[10.3.2.1⁴,⁷]octadecane-11,14-dione)

SMILES for NP0316550 ((3s,4r,7s,8r,12r)-3,8-dihydroxy-4,8,12-trimethyl-15-methylidene-13,18-dioxatricyclo[10.3.2.1⁴,⁷]octadecane-11,14-dione)

INCHI for NP0316550 ((3s,4r,7s,8r,12r)-3,8-dihydroxy-4,8,12-trimethyl-15-methylidene-13,18-dioxatricyclo[10.3.2.1⁴,⁷]octadecane-11,14-dione)

Structure for NP0316550 ((3s,4r,7s,8r,12r)-3,8-dihydroxy-4,8,12-trimethyl-15-methylidene-13,18-dioxatricyclo[10.3.2.1⁴,⁷]octadecane-11,14-dione)

3D Structure for NP0316550 ((3s,4r,7s,8r,12r)-3,8-dihydroxy-4,8,12-trimethyl-15-methylidene-13,18-dioxatricyclo[10.3.2.1⁴,⁷]octadecane-11,14-dione)