NP-MRD: Showing NP-Card for (2e,4e)-7-[(1s,3r,5s,7s,8s,10r,12s,13s,15r,18s,20r,21r,24r)-20-[(3z)-hexa-3,5-dien-1-yl]-12,21-dihydroxy-7,10,15,21-tetramethyl-4,9,14,19,25-pentaoxapentacyclo[13.10.0.0³,¹³.0⁵,¹⁰.0¹⁸,²⁴]pentacosan-8-yl]-3,4-dimethylhepta-2,4-dienal (NP0315810)

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Record Information

Version

2.0

Created at

2022-09-11 14:37:47 UTC

Updated at

2022-09-11 14:37:47 UTC

NP-MRD ID

NP0315810

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(2e,4e)-7-[(1s,3r,5s,7s,8s,10r,12s,13s,15r,18s,20r,21r,24r)-20-[(3z)-hexa-3,5-dien-1-yl]-12,21-dihydroxy-7,10,15,21-tetramethyl-4,9,14,19,25-pentaoxapentacyclo[13.10.0.0³,¹³.0⁵,¹⁰.0¹⁸,²⁴]pentacosan-8-yl]-3,4-dimethylhepta-2,4-dienal

Description

Brevenal belongs to the class of organic compounds known as oxepanes. Oxepanes are compounds containing an oxepane ring, which is a seven-member saturated aliphatic heterocycle with one oxygen and six carbon atoms. (2e,4e)-7-[(1s,3r,5s,7s,8s,10r,12s,13s,15r,18s,20r,21r,24r)-20-[(3z)-hexa-3,5-dien-1-yl]-12,21-dihydroxy-7,10,15,21-tetramethyl-4,9,14,19,25-pentaoxapentacyclo[13.10.0.0³,¹³.0⁵,¹⁰.0¹⁸,²⁴]pentacosan-8-yl]-3,4-dimethylhepta-2,4-dienal is found in Karenia brevis. (2e,4e)-7-[(1s,3r,5s,7s,8s,10r,12s,13s,15r,18s,20r,21r,24r)-20-[(3z)-hexa-3,5-dien-1-yl]-12,21-dihydroxy-7,10,15,21-tetramethyl-4,9,14,19,25-pentaoxapentacyclo[13.10.0.0³,¹³.0⁵,¹⁰.0¹⁸,²⁴]pentacosan-8-yl]-3,4-dimethylhepta-2,4-dienal was first documented in 2020 (PMID: 33129450). Based on a literature review a small amount of articles have been published on Brevenal (PMID: 34940655) (PMID: 34360618) (PMID: 34069292) (PMID: 32666578).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309112216372D          

 47 51  0  0  1  0            999 V2000
    0.1855   -1.1916    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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    1.0319   -3.2036    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7715   -3.5690    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
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    1.7632   -4.3940    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
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  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  7  6  1  1  0  0  0
  7  8  1  0  0  0  0
  9  8  1  1  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  6  0  0  0
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 15 16  1  0  0  0  0
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 28 30  2  0  0  0  0
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 22 33  1  0  0  0  0
 33 34  1  1  0  0  0
 33 35  1  0  0  0  0
 36 35  1  6  0  0  0
 19 36  1  0  0  0  0
 36 37  1  0  0  0  0
 37 38  1  0  0  0  0
 15 38  1  0  0  0  0
 38 39  1  6  0  0  0
 40 39  1  6  0  0  0
 12 40  1  0  0  0  0
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 42 41  1  6  0  0  0
  9 42  1  0  0  0  0
 42 43  1  0  0  0  0
 43 44  1  0  0  0  0
 44 45  1  0  0  0  0
  7 45  1  0  0  0  0
 45 46  1  6  0  0  0
 45 47  1  1  0  0  0
M  END

     RDKit          3D

107111  0  0  0  0  0  0  0  0999 V2000
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   -5.6945   -4.3219   -0.5166 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.2485   -2.7887   -2.1959 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6891   -1.8193   -2.4347 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6784   -3.5736   -2.2966 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.6285   -3.7213   -0.2918 H   0  0  0  0  0  0  0  0  0  0  0  0
 34 33  1  0
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 45  7  1  0
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  3  2  1  0
  2  1  2  0
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 43100  1  0
 43101  1  0
 44102  1  0
 44103  1  0
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 46105  1  0
 46106  1  0
 47107  1  0
  7 57  1  6
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  5 53  1  0
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  4 52  1  0
  3 51  1  0
  2 50  1  0
  1 48  1  0
  1 49  1  0
  9 58  1  6
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 25 79  1  0
 27 80  1  0
 27 81  1  0
 27 82  1  0
 29 83  1  0
 29 84  1  0
 29 85  1  0
 30 86  1  0
 31 87  1  0
M  END


  Mrv1652309112216372D          

 47 51  0  0  1  0            999 V2000
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   -0.3941   -3.2960    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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    1.7715   -3.5690    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.4217   -3.0612    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2241   -3.2529    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
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    5.7541   -2.4534    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
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    7.1145   -2.3653    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    6.9391   -1.5592    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.9169   -2.5570    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.2673   -3.3039    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    8.6870   -2.5936    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.0906   -3.2505    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.5485   -3.9368    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   10.3717   -3.8835    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.8296   -4.5698    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.6528   -4.5165    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.1107   -5.2028    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.7452   -5.9424    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.9339   -5.1494    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.2994   -4.4098    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.3918   -5.8358    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.2150   -5.7824    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.5805   -5.0428    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.1830   -4.6765    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    9.6408   -5.3628    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.3597   -4.7298    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9019   -4.0435    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    7.0958   -4.2190    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.4560   -3.6981    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.7374   -4.1033    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0271   -3.6836    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.3769   -4.1915    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5745   -3.9998    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.2091   -4.7394    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4030   -4.9149    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7632   -4.3940    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.2568   -5.0453    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9386   -4.3672    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  7  6  1  1  0  0  0
  7  8  1  0  0  0  0
  9  8  1  1  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  6  0  0  0
 12 14  1  0  0  0  0
 15 14  1  1  0  0  0
 15 16  1  0  0  0  0
 16 17  1  1  0  0  0
 16 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  6  0  0  0
 19 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  1  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  2  0  0  0  0
 26 27  1  0  0  0  0
 26 28  1  0  0  0  0
 28 29  1  0  0  0  0
 28 30  2  0  0  0  0
 30 31  1  0  0  0  0
 31 32  2  0  0  0  0
 22 33  1  0  0  0  0
 33 34  1  1  0  0  0
 33 35  1  0  0  0  0
 36 35  1  6  0  0  0
 19 36  1  0  0  0  0
 36 37  1  0  0  0  0
 37 38  1  0  0  0  0
 15 38  1  0  0  0  0
 38 39  1  6  0  0  0
 40 39  1  6  0  0  0
 12 40  1  0  0  0  0
 40 41  1  0  0  0  0
 42 41  1  6  0  0  0
  9 42  1  0  0  0  0
 42 43  1  0  0  0  0
 43 44  1  0  0  0  0
 44 45  1  0  0  0  0
  7 45  1  0  0  0  0
 45 46  1  6  0  0  0
 45 47  1  1  0  0  0
M  END
> <DATABASE_ID>
NP0315810

> <DATABASE_NAME>
NP-MRD

> <SMILES>
C[C@H]1C[C@@H]2O[C@@H]3C[C@@H]4O[C@@H]5CC[C@@](C)(O)[C@@H](CC\C=C/C=C)O[C@H]5CC[C@@]4(C)O[C@H]3[C@@H](O)C[C@@]2(C)O[C@H]1CC\C=C(/C)\C(\C)=C\C=O

> <INCHI_IDENTIFIER>
InChI=1S/C39H60O8/c1-8-9-10-11-15-33-37(5,42)19-16-30-31(43-33)17-20-38(6)35(44-30)23-32-36(47-38)28(41)24-39(7)34(45-32)22-27(4)29(46-39)14-12-13-25(2)26(3)18-21-40/h8-10,13,18,21,27-36,41-42H,1,11-12,14-17,19-20,22-24H2,2-7H3/b10-9-,25-13+,26-18+/t27-,28-,29-,30+,31-,32+,33+,34-,35-,36-,37+,38+,39+/m0/s1

> <INCHI_KEY>
JPBOABGEVHVPNM-KGIMXCGWSA-N

> <FORMULA>
C39H60O8

> <MOLECULAR_WEIGHT>
656.901

> <EXACT_MASS>
656.428818892

> <JCHEM_ACCEPTOR_COUNT>
8

> <JCHEM_ATOM_COUNT>
107

> <JCHEM_AVERAGE_POLARIZABILITY>
77.13725019152363

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2E,4E)-7-[(1S,3R,5S,7S,8S,10R,12S,13S,15R,18S,20R,21R,24R)-20-[(3Z)-hexa-3,5-dien-1-yl]-12,21-dihydroxy-7,10,15,21-tetramethyl-4,9,14,19,25-pentaoxapentacyclo[13.10.0.0^{3,13}.0^{5,10}.0^{18,24}]pentacosan-8-yl]-3,4-dimethylhepta-2,4-dienal

> <JCHEM_LOGP>
5.212248440666668

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
14.335921891112328

> <JCHEM_PKA_STRONGEST_ACIDIC>
13.733204854323194

> <JCHEM_PKA_STRONGEST_BASIC>
-3.2136923388149254

> <JCHEM_POLAR_SURFACE_AREA>
103.68000000000002

> <JCHEM_REFRACTIVITY>
185.2443

> <JCHEM_ROTATABLE_BOND_COUNT>
9

> <JCHEM_RULE_OF_FIVE>
0

> <JCHEM_TRADITIONAL_IUPAC>
(2E,4E)-7-[(1S,3R,5S,7S,8S,10R,12S,13S,15R,18S,20R,21R,24R)-20-[(3Z)-hexa-3,5-dien-1-yl]-12,21-dihydroxy-7,10,15,21-tetramethyl-4,9,14,19,25-pentaoxapentacyclo[13.10.0.0^{3,13}.0^{5,10}.0^{18,24}]pentacosan-8-yl]-3,4-dimethylhepta-2,4-dienal

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 11-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   11-SEP-22         0                                  
HETATM    1  C   UNK     0       0.346  -2.224   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       0.446  -3.761   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -0.835  -4.616   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -0.736  -6.152   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       0.645  -6.835   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       1.926  -5.980   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       3.307  -6.662   0.000  0.00  0.00           C+0
HETATM    8  O   UNK     0       4.520  -5.714   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0       6.018  -6.072   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       6.700  -4.691   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       8.205  -4.364   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       9.400  -5.336   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       9.530  -3.802   0.000  0.00  0.00           C+0
HETATM   14  O   UNK     0      10.741  -4.580   0.000  0.00  0.00           O+0
HETATM   15  C   UNK     0      12.067  -5.363   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      13.280  -4.415   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0      12.953  -2.910   0.000  0.00  0.00           O+0
HETATM   18  C   UNK     0      14.778  -4.773   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      15.432  -6.167   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      16.216  -4.841   0.000  0.00  0.00           C+0
HETATM   21  O   UNK     0      16.969  -6.068   0.000  0.00  0.00           O+0
HETATM   22  C   UNK     0      17.824  -7.349   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      19.361  -7.249   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      20.215  -8.530   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      21.752  -8.431   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0      22.607  -9.712   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      21.924 -11.093   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0      24.143  -9.612   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0      24.825  -8.232   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0      24.998 -10.893   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0      26.535 -10.794   0.000  0.00  0.00           C+0
HETATM   32  O   UNK     0      27.217  -9.413   0.000  0.00  0.00           O+0
HETATM   33  C   UNK     0      17.142  -8.729   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0      17.996 -10.011   0.000  0.00  0.00           C+0
HETATM   35  C   UNK     0      15.605  -8.829   0.000  0.00  0.00           C+0
HETATM   36  C   UNK     0      14.750  -7.548   0.000  0.00  0.00           C+0
HETATM   37  O   UNK     0      13.245  -7.875   0.000  0.00  0.00           O+0
HETATM   38  C   UNK     0      12.051  -6.903   0.000  0.00  0.00           C+0
HETATM   39  C   UNK     0      10.710  -7.660   0.000  0.00  0.00           C+0
HETATM   40  C   UNK     0       9.384  -6.876   0.000  0.00  0.00           C+0
HETATM   41  O   UNK     0       8.170  -7.824   0.000  0.00  0.00           O+0
HETATM   42  C   UNK     0       6.672  -7.466   0.000  0.00  0.00           C+0
HETATM   43  C   UNK     0       5.990  -8.847   0.000  0.00  0.00           C+0
HETATM   44  C   UNK     0       4.486  -9.174   0.000  0.00  0.00           C+0
HETATM   45  C   UNK     0       3.291  -8.202   0.000  0.00  0.00           C+0
HETATM   46  C   UNK     0       2.346  -9.418   0.000  0.00  0.00           C+0
HETATM   47  O   UNK     0       1.752  -8.152   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8   45                                                  
CONECT    8    7    9                                                       
CONECT    9    8   10   42                                                  
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13   14   40                                             
CONECT   13   12                                                            
CONECT   14   12   15                                                       
CONECT   15   14   16   38                                                  
CONECT   16   15   17   18                                                  
CONECT   17   16                                                            
CONECT   18   16   19                                                       
CONECT   19   18   20   21   36                                             
CONECT   20   19                                                            
CONECT   21   19   22                                                       
CONECT   22   21   23   33                                                  
CONECT   23   22   24                                                       
CONECT   24   23   25                                                       
CONECT   25   24   26                                                       
CONECT   26   25   27   28                                                  
CONECT   27   26                                                            
CONECT   28   26   29   30                                                  
CONECT   29   28                                                            
CONECT   30   28   31                                                       
CONECT   31   30   32                                                       
CONECT   32   31                                                            
CONECT   33   22   34   35                                                  
CONECT   34   33                                                            
CONECT   35   33   36                                                       
CONECT   36   35   19   37                                                  
CONECT   37   36   38                                                       
CONECT   38   37   15   39                                                  
CONECT   39   38   40                                                       
CONECT   40   39   12   41                                                  
CONECT   41   40   42                                                       
CONECT   42   41    9   43                                                  
CONECT   43   42   44                                                       
CONECT   44   43   45                                                       
CONECT   45   44    7   46   47                                             
CONECT   46   45                                                            
CONECT   47   45                                                            
MASTER        0    0    0    0    0    0    0    0   47    0  102    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₃₉H₆₀O₈

Average Mass

656.9010 Da

Monoisotopic Mass

656.42882 Da

IUPAC Name

Not Available

Traditional Name

Not Available

CAS Registry Number

Not Available

SMILES

C[C@H]1C[C@@H]2O[C@@H]3C[C@@H]4O[C@@H]5CC[C@@](C)(O)[C@@H](CC\C=C/C=C)O[C@H]5CC[C@@]4(C)O[C@H]3[C@@H](O)C[C@@]2(C)O[C@H]1CC\C=C(/C)\C(\C)=C\C=O

InChI Identifier

InChI=1S/C39H60O8/c1-8-9-10-11-15-33-37(5,42)19-16-30-31(43-33)17-20-38(6)35(44-30)23-32-36(47-38)28(41)24-39(7)34(45-32)22-27(4)29(46-39)14-12-13-25(2)26(3)18-21-40/h8-10,13,18,21,27-36,41-42H,1,11-12,14-17,19-20,22-24H2,2-7H3/b10-9-,25-13+,26-18+/t27-,28-,29-,30+,31-,32+,33+,34-,35-,36-,37+,38+,39+/m0/s1

InChI Key

JPBOABGEVHVPNM-KGIMXCGWSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Karenia brevis	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as oxepanes. Oxepanes are compounds containing an oxepane ring, which is a seven-member saturated aliphatic heterocycle with one oxygen and six carbon atoms.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Oxepanes

Sub Class

Not Available

Direct Parent

Oxepanes

Alternative Parents

Substituents

Oxepane
Oxane
Monosaccharide
Alpha,beta-unsaturated aldehyde
Enal
Tertiary alcohol
Secondary alcohol
Dialkyl ether
Oxacycle
Ether
Alcohol
Organooxygen compound
Hydrocarbon derivative
Organic oxide
Carbonyl group
Organic oxygen compound
Aldehyde
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	5.21	ChemAxon
pKa (Strongest Acidic)	13.73	ChemAxon
pKa (Strongest Basic)	-3.2	ChemAxon
Hydrogen Acceptor Count	8	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	103.68 Å²	ChemAxon
Rotatable Bond Count	9	ChemAxon
Refractivity	185.24 m³·mol⁻¹	ChemAxon
Polarizability	77.14 Å³	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

9402638

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

11227586

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Hort V, Abadie E, Arnich N, Dechraoui Bottein MY, Amzil Z: Chemodiversity of Brevetoxins and Other Potentially Toxic Metabolites Produced by Karenia spp. and Their Metabolic Products in Marine Organisms. Mar Drugs. 2021 Nov 24;19(12):656. doi: 10.3390/md19120656. [PubMed:34940655 ]
Centeio R, Ousingsawat J, Cabrita I, Schreiber R, Talbi K, Benedetto R, Dousova T, Verbeken EK, De Boeck K, Cohen I, Kunzelmann K: Mucus Release and Airway Constriction by TMEM16A May Worsen Pathology in Inflammatory Lung Disease. Int J Mol Sci. 2021 Jul 22;22(15):7852. doi: 10.3390/ijms22157852. [PubMed:34360618 ]
Shen H, Song X, Zhang Y, Zhang P, Li J, Song W, Yu Z: Profiling of Brevetoxin Metabolites Produced by Karenia brevis 165 Based on Liquid Chromatography-Mass Spectrometry. Toxins (Basel). 2021 May 14;13(5):354. doi: 10.3390/toxins13050354. [PubMed:34069292 ]
Mardones JI, Norambuena L, Paredes J, Fuenzalida G, Dorantes-Aranda JJ, Chang KJL, Guzman L, Krock B, Hallegraeff G: Unraveling the Karenia selliformis complex with the description of a non-gymnodimine producing Patagonian phylotype. Harmful Algae. 2020 Sep;98:101892. doi: 10.1016/j.hal.2020.101892. Epub 2020 Aug 20. [PubMed:33129450 ]
Li FX, Ren SJ, Li PF, Yang P, Qu J: An Endo-Selective Epoxide-Opening Cascade for the Fast Assembly of the Polycyclic Core Structure of Marine Ladder Polyethers. Angew Chem Int Ed Engl. 2020 Oct 12;59(42):18473-18478. doi: 10.1002/anie.202007980. Epub 2020 Aug 24. [PubMed:32666578 ]
LOTUS database [Link]

Showing NP-Card for (2e,4e)-7-[(1s,3r,5s,7s,8s,10r,12s,13s,15r,18s,20r,21r,24r)-20-[(3z)-hexa-3,5-dien-1-yl]-12,21-dihydroxy-7,10,15,21-tetramethyl-4,9,14,19,25-pentaoxapentacyclo[13.10.0.0³,¹³.0⁵,¹⁰.0¹⁸,²⁴]pentacosan-8-yl]-3,4-dimethylhepta-2,4-dienal (NP0315810)

MOL for NP0315810 ((2e,4e)-7-[(1s,3r,5s,7s,8s,10r,12s,13s,15r,18s,20r,21r,24r)-20-[(3z)-hexa-3,5-dien-1-yl]-12,21-dihydroxy-7,10,15,21-tetramethyl-4,9,14,19,25-pentaoxapentacyclo[13.10.0.0³,¹³.0⁵,¹⁰.0¹⁸,²⁴]pentacosan-8-yl]-3,4-dimethylhepta-2,4-dienal)

3D MOL for NP0315810 ((2e,4e)-7-[(1s,3r,5s,7s,8s,10r,12s,13s,15r,18s,20r,21r,24r)-20-[(3z)-hexa-3,5-dien-1-yl]-12,21-dihydroxy-7,10,15,21-tetramethyl-4,9,14,19,25-pentaoxapentacyclo[13.10.0.0³,¹³.0⁵,¹⁰.0¹⁸,²⁴]pentacosan-8-yl]-3,4-dimethylhepta-2,4-dienal)

3D SDF for NP0315810 ((2e,4e)-7-[(1s,3r,5s,7s,8s,10r,12s,13s,15r,18s,20r,21r,24r)-20-[(3z)-hexa-3,5-dien-1-yl]-12,21-dihydroxy-7,10,15,21-tetramethyl-4,9,14,19,25-pentaoxapentacyclo[13.10.0.0³,¹³.0⁵,¹⁰.0¹⁸,²⁴]pentacosan-8-yl]-3,4-dimethylhepta-2,4-dienal)

3D-SDF for NP0315810 ((2e,4e)-7-[(1s,3r,5s,7s,8s,10r,12s,13s,15r,18s,20r,21r,24r)-20-[(3z)-hexa-3,5-dien-1-yl]-12,21-dihydroxy-7,10,15,21-tetramethyl-4,9,14,19,25-pentaoxapentacyclo[13.10.0.0³,¹³.0⁵,¹⁰.0¹⁸,²⁴]pentacosan-8-yl]-3,4-dimethylhepta-2,4-dienal)

PDB for NP0315810 ((2e,4e)-7-[(1s,3r,5s,7s,8s,10r,12s,13s,15r,18s,20r,21r,24r)-20-[(3z)-hexa-3,5-dien-1-yl]-12,21-dihydroxy-7,10,15,21-tetramethyl-4,9,14,19,25-pentaoxapentacyclo[13.10.0.0³,¹³.0⁵,¹⁰.0¹⁸,²⁴]pentacosan-8-yl]-3,4-dimethylhepta-2,4-dienal)

3D PDB for NP0315810 ((2e,4e)-7-[(1s,3r,5s,7s,8s,10r,12s,13s,15r,18s,20r,21r,24r)-20-[(3z)-hexa-3,5-dien-1-yl]-12,21-dihydroxy-7,10,15,21-tetramethyl-4,9,14,19,25-pentaoxapentacyclo[13.10.0.0³,¹³.0⁵,¹⁰.0¹⁸,²⁴]pentacosan-8-yl]-3,4-dimethylhepta-2,4-dienal)

SMILES for NP0315810 ((2e,4e)-7-[(1s,3r,5s,7s,8s,10r,12s,13s,15r,18s,20r,21r,24r)-20-[(3z)-hexa-3,5-dien-1-yl]-12,21-dihydroxy-7,10,15,21-tetramethyl-4,9,14,19,25-pentaoxapentacyclo[13.10.0.0³,¹³.0⁵,¹⁰.0¹⁸,²⁴]pentacosan-8-yl]-3,4-dimethylhepta-2,4-dienal)

INCHI for NP0315810 ((2e,4e)-7-[(1s,3r,5s,7s,8s,10r,12s,13s,15r,18s,20r,21r,24r)-20-[(3z)-hexa-3,5-dien-1-yl]-12,21-dihydroxy-7,10,15,21-tetramethyl-4,9,14,19,25-pentaoxapentacyclo[13.10.0.0³,¹³.0⁵,¹⁰.0¹⁸,²⁴]pentacosan-8-yl]-3,4-dimethylhepta-2,4-dienal)

Structure for NP0315810 ((2e,4e)-7-[(1s,3r,5s,7s,8s,10r,12s,13s,15r,18s,20r,21r,24r)-20-[(3z)-hexa-3,5-dien-1-yl]-12,21-dihydroxy-7,10,15,21-tetramethyl-4,9,14,19,25-pentaoxapentacyclo[13.10.0.0³,¹³.0⁵,¹⁰.0¹⁸,²⁴]pentacosan-8-yl]-3,4-dimethylhepta-2,4-dienal)

3D Structure for NP0315810 ((2e,4e)-7-[(1s,3r,5s,7s,8s,10r,12s,13s,15r,18s,20r,21r,24r)-20-[(3z)-hexa-3,5-dien-1-yl]-12,21-dihydroxy-7,10,15,21-tetramethyl-4,9,14,19,25-pentaoxapentacyclo[13.10.0.0³,¹³.0⁵,¹⁰.0¹⁸,²⁴]pentacosan-8-yl]-3,4-dimethylhepta-2,4-dienal)