NP-MRD: Showing NP-Card for 4-chloro-1,3-dihydroxy-8-methoxy-2-(6-methyloxan-2-yl)xanthen-9-one (NP0314060)

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Record Information

Version

2.0

Created at

2022-09-11 11:57:55 UTC

Updated at

2022-09-11 11:57:56 UTC

NP-MRD ID

NP0314060

Secondary Accession Numbers

None

Natural Product Identification

Common Name

4-chloro-1,3-dihydroxy-8-methoxy-2-(6-methyloxan-2-yl)xanthen-9-one

Description

4-Chloro-1,3-dihydroxy-8-methoxy-2-(6-methyloxan-2-yl)-9H-xanthen-9-one belongs to the class of organic compounds known as xanthones. These are polycyclic aromatic compounds containing a xanthene moiety conjugated to a ketone group at carbon 9. Xanthene is a tricyclic compound made up of two benzene rings linearly fused to each other through a pyran ring. 4-Chloro-1,3-dihydroxy-8-methoxy-2-(6-methyloxan-2-yl)-9H-xanthen-9-one is an extremely weak basic (essentially neutral) compound (based on its pKa).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1533004201505272D          

 27 30  0  0  0  0            999 V2000
    1.4289   -4.1250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -3.7125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -0.4125    0.0000 Cl  0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592   -3.7125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447   -4.1250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447   -4.9500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -3.7125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -3.7125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -3.7125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 10 12  1  0  0  0  0
 12 13  1  0  0  0  0
 12 14  2  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 19 21  1  0  0  0  0
 15 21  1  0  0  0  0
 14 22  1  0  0  0  0
 22 23  1  0  0  0  0
 22 24  2  0  0  0  0
  9 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  2  0  0  0  0
 25 27  1  0  0  0  0
  3 27  1  0  0  0  0
  7 27  2  0  0  0  0
M  END

     RDKit          3D

 46 49  0  0  0  0  0  0  0  0999 V2000
    4.8291    3.1790    0.9791 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9620    2.1804    0.5651 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.3526    0.9417    0.0553 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6501    0.5547   -0.1221 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9817   -0.7081   -0.6248 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9443   -1.5701   -0.9352 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6066   -1.2025   -0.7616 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6573   -2.0879   -1.0598 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.3864   -1.7328   -0.8781 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4006   -2.6401   -1.1381 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7632   -4.2243   -1.7583 Cl  0  0  0  0  0  0  0  0  0  0  0  0
   -0.9364   -2.3225   -0.9276 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9092   -3.2645   -1.1914 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2528   -1.0680   -0.4577 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6485   -0.6076   -0.2808 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.2722   -1.3227    0.8941 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7767   -0.2084    1.8402 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7501    0.5742    0.9915 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9350    1.3107   -0.0581 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.7764    1.4060   -1.3479 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7789    0.7110   -0.3681 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2664   -0.1171   -0.1937 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6689    1.0940    0.2677 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0236   -0.4890   -0.4115 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0596    0.4423   -0.0977 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8021    1.5861    0.3321 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.3514    0.0450   -0.2775 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3831    4.1757    0.8237 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7790    3.1150    0.4443 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0098    3.0395    2.0948 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4424    1.2599    0.1520 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.0221   -0.9469   -0.7324 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1958   -2.5212   -1.3096 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8824   -3.0421   -1.0518 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2157   -1.0829   -1.1700 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4749   -1.8402    1.4510 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0842   -1.9945    0.7000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9230    0.3935    2.1702 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2792   -0.6377    2.7066 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4219   -0.1379    0.4441 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3473    1.2853    1.6006 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8321    2.3705    0.3164 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7785    0.4071   -1.8236 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8296    1.6621   -1.0863 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2802    2.1067   -2.0264 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2822    1.9286    0.5025 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  2  0
  6  7  1  0
  7 27  2  0
 27 25  1  0
 25 26  2  0
 25 24  1  0
 24 22  2  0
 22 23  1  0
 22 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  1  0
 19 21  1  0
 14 12  2  0
 12 13  1  0
 12 10  1  0
 10 11  1  0
 10  9  2  0
  9  8  1  0
 27  3  1  0
  9 24  1  0
  8  7  1  0
 21 15  1  0
  1 28  1  0
  1 29  1  0
  1 30  1  0
  4 31  1  0
  5 32  1  0
  6 33  1  0
 23 46  1  0
 15 35  1  6
 16 36  1  0
 16 37  1  0
 17 38  1  0
 17 39  1  0
 18 40  1  0
 18 41  1  0
 19 42  1  1
 20 43  1  0
 20 44  1  0
 20 45  1  0
 13 34  1  0
M  END


  Mrv1533004201505272D          

 27 30  0  0  0  0            999 V2000
    1.4289   -4.1250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -3.7125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -0.4125    0.0000 Cl  0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592   -3.7125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447   -4.1250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447   -4.9500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -3.7125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -3.7125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -3.7125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 10 12  1  0  0  0  0
 12 13  1  0  0  0  0
 12 14  2  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 19 21  1  0  0  0  0
 15 21  1  0  0  0  0
 14 22  1  0  0  0  0
 22 23  1  0  0  0  0
 22 24  2  0  0  0  0
  9 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  2  0  0  0  0
 25 27  1  0  0  0  0
  3 27  1  0  0  0  0
  7 27  2  0  0  0  0
M  END
> <DATABASE_ID>
NP0314060

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC1=CC=CC2=C1C(=O)C1=C(O)C(C3CCCC(C)O3)=C(O)C(Cl)=C1O2

> <INCHI_IDENTIFIER>
InChI=1S/C20H19ClO6/c1-9-5-3-7-12(26-9)14-18(23)15-17(22)13-10(25-2)6-4-8-11(13)27-20(15)16(21)19(14)24/h4,6,8-9,12,23-24H,3,5,7H2,1-2H3

> <INCHI_KEY>
MWYMVCYBLZZWPG-UHFFFAOYSA-N

> <FORMULA>
C20H19ClO6

> <MOLECULAR_WEIGHT>
390.82

> <EXACT_MASS>
390.087016

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
46

> <JCHEM_AVERAGE_POLARIZABILITY>
39.73868385045917

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
4-chloro-1,3-dihydroxy-8-methoxy-2-(6-methyloxan-2-yl)-9H-xanthen-9-one

> <ALOGPS_LOGP>
4.39

> <JCHEM_LOGP>
4.651367950333333

> <ALOGPS_LOGS>
-4.36

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
8.295496785603929

> <JCHEM_PKA_STRONGEST_ACIDIC>
5.767174882823213

> <JCHEM_PKA_STRONGEST_BASIC>
-3.6352891887326746

> <JCHEM_POLAR_SURFACE_AREA>
85.22

> <JCHEM_REFRACTIVITY>
99.8442

> <JCHEM_ROTATABLE_BOND_COUNT>
2

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.69e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
4-chloro-1,3-dihydroxy-8-methoxy-2-(6-methyloxan-2-yl)xanthen-9-one

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 20-APR-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   20-APR-15         0                                  
HETATM    1  C   UNK     0       2.667  -7.700   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0       4.001  -6.930   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0       4.001  -5.390   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       2.667  -4.620   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       2.667  -3.080   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       4.001  -2.310   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       5.335  -3.080   0.000  0.00  0.00           C+0
HETATM    8  O   UNK     0       6.668  -2.310   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0       8.002  -3.080   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       9.336  -2.310   0.000  0.00  0.00           C+0
HETATM   11 Cl   UNK     0       9.336  -0.770   0.000  0.00  0.00          Cl+0
HETATM   12  C   UNK     0      10.669  -3.080   0.000  0.00  0.00           C+0
HETATM   13  O   UNK     0      12.003  -2.310   0.000  0.00  0.00           O+0
HETATM   14  C   UNK     0      10.669  -4.620   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      12.003  -5.390   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      13.337  -4.620   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      14.670  -5.390   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      14.670  -6.930   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      13.337  -7.700   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      13.337  -9.240   0.000  0.00  0.00           C+0
HETATM   21  O   UNK     0      12.003  -6.930   0.000  0.00  0.00           O+0
HETATM   22  C   UNK     0       9.336  -5.390   0.000  0.00  0.00           C+0
HETATM   23  O   UNK     0       9.336  -6.930   0.000  0.00  0.00           O+0
HETATM   24  C   UNK     0       8.002  -4.620   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       6.668  -5.390   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0       6.668  -6.930   0.000  0.00  0.00           O+0
HETATM   27  C   UNK     0       5.335  -4.620   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4   27                                                  
CONECT    4    3    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8   27                                                  
CONECT    8    7    9                                                       
CONECT    9    8   10   24                                                  
CONECT   10    9   11   12                                                  
CONECT   11   10                                                            
CONECT   12   10   13   14                                                  
CONECT   13   12                                                            
CONECT   14   12   15   22                                                  
CONECT   15   14   16   21                                                  
CONECT   16   15   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   19                                                       
CONECT   19   18   20   21                                                  
CONECT   20   19                                                            
CONECT   21   19   15                                                       
CONECT   22   14   23   24                                                  
CONECT   23   22                                                            
CONECT   24   22    9   25                                                  
CONECT   25   24   26   27                                                  
CONECT   26   25                                                            
CONECT   27   25    3    7                                                  
MASTER        0    0    0    0    0    0    0    0   27    0   60    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₀H₁₉ClO₆

Average Mass

390.8200 Da

Monoisotopic Mass

390.08702 Da

IUPAC Name

4-chloro-1,3-dihydroxy-8-methoxy-2-(6-methyloxan-2-yl)-9H-xanthen-9-one

Traditional Name

4-chloro-1,3-dihydroxy-8-methoxy-2-(6-methyloxan-2-yl)xanthen-9-one

CAS Registry Number

Not Available

SMILES

COC1=CC=CC2=C1C(=O)C1=C(O)C(C3CCCC(C)O3)=C(O)C(Cl)=C1O2

InChI Identifier

InChI=1S/C20H19ClO6/c1-9-5-3-7-12(26-9)14-18(23)15-17(22)13-10(25-2)6-4-8-11(13)27-20(15)16(21)19(14)24/h4,6,8-9,12,23-24H,3,5,7H2,1-2H3

InChI Key

MWYMVCYBLZZWPG-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Not Available

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as xanthones. These are polycyclic aromatic compounds containing a xanthene moiety conjugated to a ketone group at carbon 9. Xanthene is a tricyclic compound made up of two benzene rings linearly fused to each other through a pyran ring.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Benzopyrans

Sub Class

1-benzopyrans

Direct Parent

Xanthones

Alternative Parents

Substituents

Xanthone
Chromone
Anisole
4-halophenol
2-halophenol
Phenol ether
Alkyl aryl ether
Phenol
Pyranone
Aryl chloride
Aryl halide
Oxane
Benzenoid
Pyran
Heteroaromatic compound
Vinylogous ester
Vinylogous acid
Oxacycle
Ether
Dialkyl ether
Organooxygen compound
Organochloride
Organohalogen compound
Hydrocarbon derivative
Organic oxygen compound
Organic oxide
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	4.39	ALOGPS
logP	4.65	ChemAxon
logS	-4.4	ALOGPS
pKa (Strongest Acidic)	5.77	ChemAxon
pKa (Strongest Basic)	-3.6	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	85.22 Å²	ChemAxon
Rotatable Bond Count	2	ChemAxon
Refractivity	99.84 m³·mol⁻¹	ChemAxon
Polarizability	39.74 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

74423097

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for 4-chloro-1,3-dihydroxy-8-methoxy-2-(6-methyloxan-2-yl)xanthen-9-one (NP0314060)

MOL for NP0314060 (4-chloro-1,3-dihydroxy-8-methoxy-2-(6-methyloxan-2-yl)xanthen-9-one)

3D MOL for NP0314060 (4-chloro-1,3-dihydroxy-8-methoxy-2-(6-methyloxan-2-yl)xanthen-9-one)

3D SDF for NP0314060 (4-chloro-1,3-dihydroxy-8-methoxy-2-(6-methyloxan-2-yl)xanthen-9-one)

3D-SDF for NP0314060 (4-chloro-1,3-dihydroxy-8-methoxy-2-(6-methyloxan-2-yl)xanthen-9-one)

PDB for NP0314060 (4-chloro-1,3-dihydroxy-8-methoxy-2-(6-methyloxan-2-yl)xanthen-9-one)

3D PDB for NP0314060 (4-chloro-1,3-dihydroxy-8-methoxy-2-(6-methyloxan-2-yl)xanthen-9-one)

SMILES for NP0314060 (4-chloro-1,3-dihydroxy-8-methoxy-2-(6-methyloxan-2-yl)xanthen-9-one)

INCHI for NP0314060 (4-chloro-1,3-dihydroxy-8-methoxy-2-(6-methyloxan-2-yl)xanthen-9-one)

Structure for NP0314060 (4-chloro-1,3-dihydroxy-8-methoxy-2-(6-methyloxan-2-yl)xanthen-9-one)

3D Structure for NP0314060 (4-chloro-1,3-dihydroxy-8-methoxy-2-(6-methyloxan-2-yl)xanthen-9-one)