NP-MRD: Showing NP-Card for (1r,3s,5r,7r,8r,9r,10r,15r)-15-[(3r)-2,2-dimethyl-5-oxooxolan-3-yl]-8,15-dimethyl-2-methylidene-12-oxo-7-(2-oxo-5h-furan-3-yl)-4,11-dioxatetracyclo[8.5.0.0³,⁵.0³,⁸]pentadec-13-en-9-yl acetate (NP0313618)

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Record Information

Version

2.0

Created at

2022-09-11 11:17:46 UTC

Updated at

2022-09-11 11:17:46 UTC

NP-MRD ID

NP0313618

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(1r,3s,5r,7r,8r,9r,10r,15r)-15-[(3r)-2,2-dimethyl-5-oxooxolan-3-yl]-8,15-dimethyl-2-methylidene-12-oxo-7-(2-oxo-5h-furan-3-yl)-4,11-dioxatetracyclo[8.5.0.0³,⁵.0³,⁸]pentadec-13-en-9-yl acetate

Description

MUNRONIN C belongs to the class of organic compounds known as tetracarboxylic acids and derivatives. These are carboxylic acids containing exactly four carboxyl groups. (1r,3s,5r,7r,8r,9r,10r,15r)-15-[(3r)-2,2-dimethyl-5-oxooxolan-3-yl]-8,15-dimethyl-2-methylidene-12-oxo-7-(2-oxo-5h-furan-3-yl)-4,11-dioxatetracyclo[8.5.0.0³,⁵.0³,⁸]pentadec-13-en-9-yl acetate is found in Munronia pinnata. Based on a literature review very few articles have been published on MUNRONIN C.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309112213172D          

 37 42  0  0  1  0            999 V2000
    1.8500    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8500    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5645    0.8250    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.5645    0.0000    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.2095   -0.5144    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.0138   -0.3308    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5282   -0.9758    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.3717    0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0138    1.1558    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2095    1.3394    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.6807    1.9727    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4110    2.1394    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.1767    2.4465    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1212    3.2696    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7546    3.7984    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.3213    3.4712    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
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   -0.1340    0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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  1  2  2  0  0  0  0
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  4  5  1  1  0  0  0
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  9 10  1  0  0  0  0
  3 10  1  0  0  0  0
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  4 20  1  0  0  0  0
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  2 37  1  0  0  0  0
 35 37  1  0  0  0  0
 25 37  1  0  0  0  0
M  END

     RDKit          3D

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M  END


  Mrv1652309112213172D          

 37 42  0  0  1  0            999 V2000
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 12 13  1  6  0  0  0
 13 14  1  0  0  0  0
 14 15  2  0  0  0  0
 14 16  1  0  0  0  0
 16 17  1  0  0  0  0
 12 17  1  0  0  0  0
 17 18  1  0  0  0  0
 17 19  1  0  0  0  0
  4 20  1  0  0  0  0
 20 21  1  6  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 22 24  2  0  0  0  0
 20 25  1  0  0  0  0
 25 26  1  6  0  0  0
 25 27  1  0  0  0  0
 27 28  1  6  0  0  0
 28 29  2  0  0  0  0
 29 30  1  0  0  0  0
 30 31  1  0  0  0  0
 31 32  1  0  0  0  0
 28 32  1  0  0  0  0
 32 33  2  0  0  0  0
 27 34  1  0  0  0  0
 34 35  1  0  0  0  0
 35 36  1  1  0  0  0
 37 36  1  1  0  0  0
  2 37  1  0  0  0  0
 35 37  1  0  0  0  0
 25 37  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0313618

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC(=O)O[C@H]1[C@@H]2OC(=O)C=C[C@@](C)([C@H]3CC(=O)OC3(C)C)[C@@H]2C(=C)[C@@]23O[C@@H]2C[C@@H](C2=CCOC2=O)[C@]13C

> <INCHI_IDENTIFIER>
InChI=1S/C28H32O9/c1-13-21-22(35-19(30)7-9-26(21,5)17-12-20(31)37-25(17,3)4)23(34-14(2)29)27(6)16(11-18-28(13,27)36-18)15-8-10-33-24(15)32/h7-9,16-18,21-23H,1,10-12H2,2-6H3/t16-,17-,18+,21+,22+,23-,26-,27+,28+/m0/s1

> <INCHI_KEY>
NIHFQUOLHVRBPD-LELWZTHMSA-N

> <FORMULA>
C28H32O9

> <MOLECULAR_WEIGHT>
512.555

> <EXACT_MASS>
512.20463261

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
69

> <JCHEM_AVERAGE_POLARIZABILITY>
51.58779154463271

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(1R,3S,5R,7R,8R,9R,10R,15R)-15-[(3R)-2,2-dimethyl-5-oxooxolan-3-yl]-8,15-dimethyl-2-methylidene-12-oxo-7-(2-oxo-2,5-dihydrofuran-3-yl)-4,11-dioxatetracyclo[8.5.0.0^{3,5}.0^{3,8}]pentadec-13-en-9-yl acetate

> <JCHEM_LOGP>
2.266797501333333

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
6

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
13.360306537125894

> <JCHEM_PKA_STRONGEST_BASIC>
-4.2597324116216235

> <JCHEM_POLAR_SURFACE_AREA>
117.73000000000002

> <JCHEM_REFRACTIVITY>
128.10339999999997

> <JCHEM_ROTATABLE_BOND_COUNT>
4

> <JCHEM_RULE_OF_FIVE>
0

> <JCHEM_TRADITIONAL_IUPAC>
(1R,3S,5R,7R,8R,9R,10R,15R)-15-[(3R)-2,2-dimethyl-5-oxooxolan-3-yl]-8,15-dimethyl-2-methylidene-12-oxo-7-(2-oxo-5H-furan-3-yl)-4,11-dioxatetracyclo[8.5.0.0^{3,5}.0^{3,8}]pentadec-13-en-9-yl acetate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 11-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   11-SEP-22         0                                  
HETATM    1  C   UNK     0       3.453   3.850   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       3.453   2.310   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       4.787   1.540   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       4.787   0.000   0.000  0.00  0.00           C+0
HETATM    5  O   UNK     0       5.991  -0.960   0.000  0.00  0.00           O+0
HETATM    6  C   UNK     0       7.492  -0.617   0.000  0.00  0.00           C+0
HETATM    7  O   UNK     0       8.453  -1.822   0.000  0.00  0.00           O+0
HETATM    8  C   UNK     0       8.161   0.770   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       7.492   2.157   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       5.991   2.500   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       5.004   3.682   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       6.367   3.993   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       7.797   4.567   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       7.693   6.103   0.000  0.00  0.00           C+0
HETATM   15  O   UNK     0       8.875   7.090   0.000  0.00  0.00           O+0
HETATM   16  O   UNK     0       6.200   6.480   0.000  0.00  0.00           O+0
HETATM   17  C   UNK     0       5.380   5.176   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       3.991   5.840   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       4.093   4.331   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       3.453  -0.770   0.000  0.00  0.00           C+0
HETATM   21  O   UNK     0       3.453  -2.310   0.000  0.00  0.00           O+0
HETATM   22  C   UNK     0       4.787  -3.080   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       6.121  -2.310   0.000  0.00  0.00           C+0
HETATM   24  O   UNK     0       4.787  -4.620   0.000  0.00  0.00           O+0
HETATM   25  C   UNK     0       2.120   0.000   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       1.959  -1.532   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       0.655  -0.476   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0       0.179  -1.941   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       1.084  -3.186   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0       0.179  -4.432   0.000  0.00  0.00           C+0
HETATM   31  O   UNK     0      -1.286  -3.956   0.000  0.00  0.00           O+0
HETATM   32  C   UNK     0      -1.286  -2.416   0.000  0.00  0.00           C+0
HETATM   33  O   UNK     0      -2.531  -1.511   0.000  0.00  0.00           O+0
HETATM   34  C   UNK     0      -0.250   0.770   0.000  0.00  0.00           C+0
HETATM   35  C   UNK     0       0.655   2.016   0.000  0.00  0.00           C+0
HETATM   36  O   UNK     0       1.799   3.046   0.000  0.00  0.00           O+0
HETATM   37  C   UNK     0       2.120   1.540   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3   37                                                  
CONECT    3    2    4   10                                                  
CONECT    4    3    5   20                                                  
CONECT    5    4    6                                                       
CONECT    6    5    7    8                                                  
CONECT    7    6                                                            
CONECT    8    6    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9    3   11   12                                             
CONECT   11   10                                                            
CONECT   12   10   13   17                                                  
CONECT   13   12   14                                                       
CONECT   14   13   15   16                                                  
CONECT   15   14                                                            
CONECT   16   14   17                                                       
CONECT   17   16   12   18   19                                             
CONECT   18   17                                                            
CONECT   19   17                                                            
CONECT   20    4   21   25                                                  
CONECT   21   20   22                                                       
CONECT   22   21   23   24                                                  
CONECT   23   22                                                            
CONECT   24   22                                                            
CONECT   25   20   26   27   37                                             
CONECT   26   25                                                            
CONECT   27   25   28   34                                                  
CONECT   28   27   29   32                                                  
CONECT   29   28   30                                                       
CONECT   30   29   31                                                       
CONECT   31   30   32                                                       
CONECT   32   31   28   33                                                  
CONECT   33   32                                                            
CONECT   34   27   35                                                       
CONECT   35   34   36   37                                                  
CONECT   36   35   37                                                       
CONECT   37   36    2   35   25                                             
MASTER        0    0    0    0    0    0    0    0   37    0   84    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₈H₃₂O₉

Average Mass

512.5550 Da

Monoisotopic Mass

512.20463 Da

IUPAC Name

Not Available

Traditional Name

Not Available

CAS Registry Number

Not Available

SMILES

CC(=O)O[C@H]1[C@@H]2OC(=O)C=C[C@@](C)([C@H]3CC(=O)OC3(C)C)[C@@H]2C(=C)[C@@]23O[C@@H]2C[C@@H](C2=CCOC2=O)[C@]13C

InChI Identifier

InChI=1S/C28H32O9/c1-13-21-22(35-19(30)7-9-26(21,5)17-12-20(31)37-25(17,3)4)23(34-14(2)29)27(6)16(11-18-28(13,27)36-18)15-8-10-33-24(15)32/h7-9,16-18,21-23H,1,10-12H2,2-6H3/t16-,17-,18+,21+,22+,23-,26-,27+,28+/m0/s1

InChI Key

NIHFQUOLHVRBPD-LELWZTHMSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Munronia pinnata	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as tetracarboxylic acids and derivatives. These are carboxylic acids containing exactly four carboxyl groups.

Kingdom

Organic compounds

Super Class

Organic acids and derivatives

Class

Carboxylic acids and derivatives

Sub Class

Tetracarboxylic acids and derivatives

Direct Parent

Tetracarboxylic acids and derivatives

Alternative Parents

Substituents

Tetracarboxylic acid or derivatives
2-furanone
Gamma butyrolactone
Oxane
Dihydrofuran
Tetrahydrofuran
Enoate ester
Alpha,beta-unsaturated carboxylic ester
Lactone
Carboxylic acid ester
Oxacycle
Ether
Oxirane
Dialkyl ether
Organoheterocyclic compound
Hydrocarbon derivative
Organooxygen compound
Organic oxide
Organic oxygen compound
Carbonyl group
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

9235466

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

11060310

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (1r,3s,5r,7r,8r,9r,10r,15r)-15-[(3r)-2,2-dimethyl-5-oxooxolan-3-yl]-8,15-dimethyl-2-methylidene-12-oxo-7-(2-oxo-5h-furan-3-yl)-4,11-dioxatetracyclo[8.5.0.0³,⁵.0³,⁸]pentadec-13-en-9-yl acetate (NP0313618)

MOL for NP0313618 ((1r,3s,5r,7r,8r,9r,10r,15r)-15-[(3r)-2,2-dimethyl-5-oxooxolan-3-yl]-8,15-dimethyl-2-methylidene-12-oxo-7-(2-oxo-5h-furan-3-yl)-4,11-dioxatetracyclo[8.5.0.0³,⁵.0³,⁸]pentadec-13-en-9-yl acetate)

3D MOL for NP0313618 ((1r,3s,5r,7r,8r,9r,10r,15r)-15-[(3r)-2,2-dimethyl-5-oxooxolan-3-yl]-8,15-dimethyl-2-methylidene-12-oxo-7-(2-oxo-5h-furan-3-yl)-4,11-dioxatetracyclo[8.5.0.0³,⁵.0³,⁸]pentadec-13-en-9-yl acetate)

3D SDF for NP0313618 ((1r,3s,5r,7r,8r,9r,10r,15r)-15-[(3r)-2,2-dimethyl-5-oxooxolan-3-yl]-8,15-dimethyl-2-methylidene-12-oxo-7-(2-oxo-5h-furan-3-yl)-4,11-dioxatetracyclo[8.5.0.0³,⁵.0³,⁸]pentadec-13-en-9-yl acetate)

3D-SDF for NP0313618 ((1r,3s,5r,7r,8r,9r,10r,15r)-15-[(3r)-2,2-dimethyl-5-oxooxolan-3-yl]-8,15-dimethyl-2-methylidene-12-oxo-7-(2-oxo-5h-furan-3-yl)-4,11-dioxatetracyclo[8.5.0.0³,⁵.0³,⁸]pentadec-13-en-9-yl acetate)

PDB for NP0313618 ((1r,3s,5r,7r,8r,9r,10r,15r)-15-[(3r)-2,2-dimethyl-5-oxooxolan-3-yl]-8,15-dimethyl-2-methylidene-12-oxo-7-(2-oxo-5h-furan-3-yl)-4,11-dioxatetracyclo[8.5.0.0³,⁵.0³,⁸]pentadec-13-en-9-yl acetate)

3D PDB for NP0313618 ((1r,3s,5r,7r,8r,9r,10r,15r)-15-[(3r)-2,2-dimethyl-5-oxooxolan-3-yl]-8,15-dimethyl-2-methylidene-12-oxo-7-(2-oxo-5h-furan-3-yl)-4,11-dioxatetracyclo[8.5.0.0³,⁵.0³,⁸]pentadec-13-en-9-yl acetate)

SMILES for NP0313618 ((1r,3s,5r,7r,8r,9r,10r,15r)-15-[(3r)-2,2-dimethyl-5-oxooxolan-3-yl]-8,15-dimethyl-2-methylidene-12-oxo-7-(2-oxo-5h-furan-3-yl)-4,11-dioxatetracyclo[8.5.0.0³,⁵.0³,⁸]pentadec-13-en-9-yl acetate)

INCHI for NP0313618 ((1r,3s,5r,7r,8r,9r,10r,15r)-15-[(3r)-2,2-dimethyl-5-oxooxolan-3-yl]-8,15-dimethyl-2-methylidene-12-oxo-7-(2-oxo-5h-furan-3-yl)-4,11-dioxatetracyclo[8.5.0.0³,⁵.0³,⁸]pentadec-13-en-9-yl acetate)

Structure for NP0313618 ((1r,3s,5r,7r,8r,9r,10r,15r)-15-[(3r)-2,2-dimethyl-5-oxooxolan-3-yl]-8,15-dimethyl-2-methylidene-12-oxo-7-(2-oxo-5h-furan-3-yl)-4,11-dioxatetracyclo[8.5.0.0³,⁵.0³,⁸]pentadec-13-en-9-yl acetate)

3D Structure for NP0313618 ((1r,3s,5r,7r,8r,9r,10r,15r)-15-[(3r)-2,2-dimethyl-5-oxooxolan-3-yl]-8,15-dimethyl-2-methylidene-12-oxo-7-(2-oxo-5h-furan-3-yl)-4,11-dioxatetracyclo[8.5.0.0³,⁵.0³,⁸]pentadec-13-en-9-yl acetate)