NP-MRD: Showing NP-Card for 2'-hydroxy-16'-[(3-hydroxy-4-methoxy-6-methyl-5-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl)oxy]-13'-methyl-7'-oxaspiro[oxolane-3,6'-pentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosan]-5-one (NP0313445)

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Record Information

Version

2.0

Created at

2022-09-11 10:59:44 UTC

Updated at

2022-09-11 10:59:45 UTC

NP-MRD ID

NP0313445

Secondary Accession Numbers

None

Natural Product Identification

Common Name

2'-hydroxy-16'-[(3-hydroxy-4-methoxy-6-methyl-5-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl)oxy]-13'-methyl-7'-oxaspiro[oxolane-3,6'-pentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosan]-5-one

Description

2'-Hydroxy-16'-[(3-hydroxy-4-methoxy-6-methyl-5-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl)oxy]-13'-methyl-7'-oxaspiro[oxolane-3,6'-pentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]Icosane]-5-one belongs to the class of organic compounds known as cardenolide glycosides and derivatives. Cardenolide glycosides and derivatives are compounds containing a carbohydrate glycosidically bound to the cardenolide moiety. 2'-hydroxy-16'-[(3-hydroxy-4-methoxy-6-methyl-5-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl)oxy]-13'-methyl-7'-oxaspiro[oxolane-3,6'-pentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosan]-5-one is found in Thevetia peruviana. 2'-Hydroxy-16'-[(3-hydroxy-4-methoxy-6-methyl-5-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl)oxy]-13'-methyl-7'-oxaspiro[oxolane-3,6'-pentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]Icosane]-5-one is an extremely weak basic (essentially neutral) compound (based on its pKa).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1533004171504102D          

 50 57  0  0  0  0            999 V2000
    8.6570   -0.4902    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.3311    0.2677    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.5118    0.3645    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.0184   -0.2966    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.3442   -1.0546    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.1991   -0.1998    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7056   -0.8610    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.8863   -0.7642    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3928   -1.4254    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5735   -1.3286    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2477   -0.5707    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7542   -1.2318    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7411    0.0905    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4153    0.8484    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5960    0.9452    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1025    0.2840    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4284   -0.4739    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9349   -1.1350    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1156   -1.0382    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7898   -0.2803    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7792   -1.1053    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0087   -1.3501    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4850   -0.6765    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9784   -1.3376    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7597   -1.0726    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7491   -0.2477    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4103    0.2458    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9613   -0.0028    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0085   -0.0153    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0191    0.8096    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8069    1.0544    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2832    0.3808    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7049    1.0899    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.5604   -0.0063    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8732    0.5581    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.3667    1.2192    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0408    1.9772    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1860    1.1224    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.6794    1.7836    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.4988    1.6868    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.8246    0.9289    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.6439    0.8321    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.9697    0.0742    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.4763   -0.5870    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.1374    1.4933    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.9567    1.3965    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.8115    2.2512    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.3050    2.9123    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.9922    2.3480    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.6664    3.1059    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  4  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 11 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 11 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  2  0  0  0  0
 26 28  1  0  0  0  0
 23 28  1  0  0  0  0
 23 29  1  0  0  0  0
 20 29  1  0  0  0  0
 29 30  1  0  0  0  0
 30 31  1  0  0  0  0
 31 32  1  0  0  0  0
 16 32  1  0  0  0  0
 20 32  1  0  0  0  0
 32 33  1  0  0  0  0
 13 34  1  0  0  0  0
  8 34  1  0  0  0  0
  6 35  1  0  0  0  0
 35 36  1  0  0  0  0
 36 37  1  0  0  0  0
 36 38  1  0  0  0  0
  3 38  1  0  0  0  0
 38 39  1  0  0  0  0
 39 40  1  0  0  0  0
 40 41  1  0  0  0  0
 41 42  1  0  0  0  0
 42 43  1  0  0  0  0
 43 44  1  0  0  0  0
 42 45  1  0  0  0  0
 45 46  1  0  0  0  0
 45 47  1  0  0  0  0
 47 48  1  0  0  0  0
 47 49  1  0  0  0  0
 40 49  1  0  0  0  0
 49 50  1  0  0  0  0
M  END

     RDKit          3D

106113  0  0  0  0  0  0  0  0999 V2000
   -2.4669    1.6222    1.0001 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9764    0.7129    0.1261 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5421    1.2272   -0.9776 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.7340    0.7049   -2.1960 C   0  0  1  0  0  0  0  0  0  0  0  0
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   -2.5104   -0.7362   -1.9733 C   0  0  1  0  0  0  0  0  0  0  0  0
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   -0.5504   -2.0529   -1.9193 C   0  0  2  0  0  0  0  0  0  0  0  0
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    0.9876   -2.2267    0.0397 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1974   -1.9405   -0.8440 C   0  0  2  0  0  0  0  0  0  0  0  0
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    4.5963   -2.2324   -0.4681 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8072   -1.9937    0.4004 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9275   -0.6033    0.8740 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.8864   -0.4350    2.3644 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1781   -0.3789    2.8211 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.0647   -0.2845    1.7898 C   0  0  2  0  0  0  0  0  0  0  0  0
    8.9482   -1.4992    1.6037 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.0602   -1.2821    2.4761 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.2854    0.0870    2.5828 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.3489    0.5646    3.0085 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.0804    0.8168    2.1176 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2800    0.0496    0.5760 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.9580    1.5258    0.5773 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4301    1.6488    0.5438 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0478    0.2780    0.0783 C   0  0  1  0  0  0  0  0  0  0  0  0
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    3.5723   -0.0327    0.1353 C   0  0  1  0  0  0  0  0  0  0  0  0
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    0.6255   -1.4955   -2.6973 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -4.7676   -0.7222   -1.7552 C   0  0  1  0  0  0  0  0  0  0  0  0
   -5.8154   -1.7258   -1.3896 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -7.6710    2.9539    1.7062 C   0  0  2  0  0  0  0  0  0  0  0  0
   -7.5227    2.9023    3.2293 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.5701    1.6331    3.7450 O   0  0  0  0  0  0  0  0  0  0  0  0
   -9.0849    2.6548    1.3573 C   0  0  2  0  0  0  0  0  0  0  0  0
   -9.7227    1.7539    2.2096 O   0  0  0  0  0  0  0  0  0  0  0  0
   -9.1599    2.1650   -0.0933 C   0  0  1  0  0  0  0  0  0  0  0  0
   -8.7651    3.2435   -0.8700 O   0  0  0  0  0  0  0  0  0  0  0  0
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   -1.6447    2.2696    0.5647 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9546    1.0564    1.8081 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4902    2.2839   -1.0170 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3727    0.8172   -3.1059 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -1.0825   -2.6921   -2.6690 H   0  0  0  0  0  0  0  0  0  0  0  0
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    5.4320   -1.3594    2.8060 H   0  0  0  0  0  0  0  0  0  0  0  0
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    7.2947    2.0594    1.4838 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -5.4419   -2.4182   -0.5952 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2922    1.3360   -2.0285 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7670    2.5356   -0.8312 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.4981    4.0461    1.4603 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.4017    3.4899    3.6196 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5980    3.4014    3.5739 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -9.6748    3.5920    1.3824 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.3886    1.1972    1.7284 H   0  0  0  0  0  0  0  0  0  0  0  0
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 13 66  1  1
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 44100  1  0
 45101  1  6
 46102  1  0
 47103  1  6
 48104  1  0
 49105  1  6
 50106  1  0
M  END


  Mrv1533004171504102D          

 50 57  0  0  0  0            999 V2000
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   -0.0087   -1.3501    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4850   -0.6765    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9784   -1.3376    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7597   -1.0726    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7491   -0.2477    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4103    0.2458    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9613   -0.0028    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0085   -0.0153    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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    0.8069    1.0544    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2832    0.3808    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7049    1.0899    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.5604   -0.0063    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8732    0.5581    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.3667    1.2192    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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    7.1860    1.1224    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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    8.8246    0.9289    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
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    9.4763   -0.5870    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.1374    1.4933    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.9567    1.3965    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.8115    2.2512    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.3050    2.9123    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.9922    2.3480    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.6664    3.1059    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
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  4  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
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 11 13  1  0  0  0  0
 13 14  1  0  0  0  0
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 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 11 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
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 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  2  0  0  0  0
 26 28  1  0  0  0  0
 23 28  1  0  0  0  0
 23 29  1  0  0  0  0
 20 29  1  0  0  0  0
 29 30  1  0  0  0  0
 30 31  1  0  0  0  0
 31 32  1  0  0  0  0
 16 32  1  0  0  0  0
 20 32  1  0  0  0  0
 32 33  1  0  0  0  0
 13 34  1  0  0  0  0
  8 34  1  0  0  0  0
  6 35  1  0  0  0  0
 35 36  1  0  0  0  0
 36 37  1  0  0  0  0
 36 38  1  0  0  0  0
  3 38  1  0  0  0  0
 38 39  1  0  0  0  0
 39 40  1  0  0  0  0
 40 41  1  0  0  0  0
 41 42  1  0  0  0  0
 42 43  1  0  0  0  0
 43 44  1  0  0  0  0
 42 45  1  0  0  0  0
 45 46  1  0  0  0  0
 45 47  1  0  0  0  0
 47 48  1  0  0  0  0
 47 49  1  0  0  0  0
 40 49  1  0  0  0  0
 49 50  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0313445

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC1C(O)C(OC2CCC3(C)C(CCC4C3CCC35COC6(COC(=O)C6)C3CCC45O)C2)OC(C)C1OC1OC(CO)C(O)C(O)C1O

> <INCHI_IDENTIFIER>
InChI=1S/C36H56O14/c1-17-29(50-31-27(41)26(40)25(39)22(14-37)49-31)30(44-3)28(42)32(47-17)48-19-6-9-33(2)18(12-19)4-5-21-20(33)7-10-34-15-46-35(13-24(38)45-16-35)23(34)8-11-36(21,34)43/h17-23,25-32,37,39-43H,4-16H2,1-3H3

> <INCHI_KEY>
UMTVXISMEAIITJ-UHFFFAOYSA-N

> <FORMULA>
C36H56O14

> <MOLECULAR_WEIGHT>
712.83

> <EXACT_MASS>
712.367006483

> <JCHEM_ACCEPTOR_COUNT>
13

> <JCHEM_ATOM_COUNT>
106

> <JCHEM_AVERAGE_POLARIZABILITY>
76.63175508756183

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
6

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
2'-hydroxy-16'-[(3-hydroxy-4-methoxy-6-methyl-5-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl)oxy]-13'-methyl-7'-oxaspiro[oxolane-3,6'-pentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosane]-5-one

> <ALOGPS_LOGP>
0.33

> <JCHEM_LOGP>
-0.01628539166666476

> <ALOGPS_LOGS>
-3.13

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
8

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
12.52743918457315

> <JCHEM_PKA_STRONGEST_ACIDIC>
11.976211430487801

> <JCHEM_PKA_STRONGEST_BASIC>
-2.981083565261346

> <JCHEM_POLAR_SURFACE_AREA>
203.05999999999997

> <JCHEM_REFRACTIVITY>
170.4097

> <JCHEM_ROTATABLE_BOND_COUNT>
6

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
5.29e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
2'-hydroxy-16'-[(3-hydroxy-4-methoxy-6-methyl-5-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl)oxy]-13'-methyl-7'-oxaspiro[oxolane-3,6'-pentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosane]-5-one

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 17-APR-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   17-APR-15         0                                  
HETATM    1  C   UNK     0      16.160  -0.915   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0      15.551   0.500   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0      14.022   0.680   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      13.101  -0.554   0.000  0.00  0.00           C+0
HETATM    5  O   UNK     0      13.709  -1.969   0.000  0.00  0.00           O+0
HETATM    6  C   UNK     0      11.572  -0.373   0.000  0.00  0.00           C+0
HETATM    7  O   UNK     0      10.650  -1.607   0.000  0.00  0.00           O+0
HETATM    8  C   UNK     0       9.121  -1.427   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       8.200  -2.661   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       6.671  -2.480   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       6.062  -1.065   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       5.141  -2.299   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       6.983   0.169   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       6.375   1.584   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       4.846   1.764   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       3.925   0.530   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       4.533  -0.885   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       3.612  -2.119   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       2.082  -1.938   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       1.474  -0.523   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       1.454  -2.063   0.000  0.00  0.00           C+0
HETATM   22  O   UNK     0      -0.016  -2.520   0.000  0.00  0.00           O+0
HETATM   23  C   UNK     0      -0.905  -1.263   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      -1.826  -2.497   0.000  0.00  0.00           C+0
HETATM   25  O   UNK     0      -3.285  -2.002   0.000  0.00  0.00           O+0
HETATM   26  C   UNK     0      -3.265  -0.462   0.000  0.00  0.00           C+0
HETATM   27  O   UNK     0      -4.499   0.459   0.000  0.00  0.00           O+0
HETATM   28  C   UNK     0      -1.794  -0.005   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       0.016  -0.029   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0       0.036   1.511   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0       1.506   1.968   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0       2.395   0.711   0.000  0.00  0.00           C+0
HETATM   33  O   UNK     0       3.182   2.035   0.000  0.00  0.00           O+0
HETATM   34  C   UNK     0       8.513  -0.012   0.000  0.00  0.00           C+0
HETATM   35  O   UNK     0      10.963   1.042   0.000  0.00  0.00           O+0
HETATM   36  C   UNK     0      11.884   2.276   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0      11.276   3.691   0.000  0.00  0.00           C+0
HETATM   38  C   UNK     0      13.414   2.095   0.000  0.00  0.00           C+0
HETATM   39  O   UNK     0      14.335   3.329   0.000  0.00  0.00           O+0
HETATM   40  C   UNK     0      15.864   3.149   0.000  0.00  0.00           C+0
HETATM   41  O   UNK     0      16.473   1.734   0.000  0.00  0.00           O+0
HETATM   42  C   UNK     0      18.002   1.553   0.000  0.00  0.00           C+0
HETATM   43  C   UNK     0      18.610   0.138   0.000  0.00  0.00           C+0
HETATM   44  O   UNK     0      17.689  -1.096   0.000  0.00  0.00           O+0
HETATM   45  C   UNK     0      18.923   2.787   0.000  0.00  0.00           C+0
HETATM   46  O   UNK     0      20.452   2.607   0.000  0.00  0.00           O+0
HETATM   47  C   UNK     0      18.315   4.202   0.000  0.00  0.00           C+0
HETATM   48  O   UNK     0      19.236   5.436   0.000  0.00  0.00           O+0
HETATM   49  C   UNK     0      16.785   4.383   0.000  0.00  0.00           C+0
HETATM   50  O   UNK     0      16.177   5.798   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4   38                                                  
CONECT    4    3    5    6                                                  
CONECT    5    4                                                            
CONECT    6    4    7   35                                                  
CONECT    7    6    8                                                       
CONECT    8    7    9   34                                                  
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12   13   17                                             
CONECT   12   11                                                            
CONECT   13   11   14   34                                                  
CONECT   14   13   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   17   32                                                  
CONECT   17   16   11   18                                                  
CONECT   18   17   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   21   29   32                                             
CONECT   21   20   22                                                       
CONECT   22   21   23                                                       
CONECT   23   22   24   28   29                                             
CONECT   24   23   25                                                       
CONECT   25   24   26                                                       
CONECT   26   25   27   28                                                  
CONECT   27   26                                                            
CONECT   28   26   23                                                       
CONECT   29   23   20   30                                                  
CONECT   30   29   31                                                       
CONECT   31   30   32                                                       
CONECT   32   31   16   20   33                                             
CONECT   33   32                                                            
CONECT   34   13    8                                                       
CONECT   35    6   36                                                       
CONECT   36   35   37   38                                                  
CONECT   37   36                                                            
CONECT   38   36    3   39                                                  
CONECT   39   38   40                                                       
CONECT   40   39   41   49                                                  
CONECT   41   40   42                                                       
CONECT   42   41   43   45                                                  
CONECT   43   42   44                                                       
CONECT   44   43                                                            
CONECT   45   42   46   47                                                  
CONECT   46   45                                                            
CONECT   47   45   48   49                                                  
CONECT   48   47                                                            
CONECT   49   47   40   50                                                  
CONECT   50   49                                                            
MASTER        0    0    0    0    0    0    0    0   50    0  114    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₃₆H₅₆O₁₄

Average Mass

712.8300 Da

Monoisotopic Mass

712.36701 Da

IUPAC Name

Traditional Name

CAS Registry Number

Not Available

SMILES

COC1C(O)C(OC2CCC3(C)C(CCC4C3CCC35COC6(COC(=O)C6)C3CCC45O)C2)OC(C)C1OC1OC(CO)C(O)C(O)C1O

InChI Identifier

InChI=1S/C36H56O14/c1-17-29(50-31-27(41)26(40)25(39)22(14-37)49-31)30(44-3)28(42)32(47-17)48-19-6-9-33(2)18(12-19)4-5-21-20(33)7-10-34-15-46-35(13-24(38)45-16-35)23(34)8-11-36(21,34)43/h17-23,25-32,37,39-43H,4-16H2,1-3H3

InChI Key

UMTVXISMEAIITJ-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Thevetia peruviana	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as cardenolide glycosides and derivatives. Cardenolide glycosides and derivatives are compounds containing a carbohydrate glycosidically bound to the cardenolide moiety.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Steroids and steroid derivatives

Sub Class

Steroid lactones

Direct Parent

Cardenolide glycosides and derivatives

Alternative Parents

Substituents

Cardanolide-glycoside
Steroidal glycoside
14-hydroxysteroid
Hydroxysteroid
Disaccharide
Glycosyl compound
O-glycosyl compound
Gamma butyrolactone
Oxane
Cyclic alcohol
Tetrahydrofuran
Tertiary alcohol
Carboxylic acid ester
Secondary alcohol
Lactone
Organoheterocyclic compound
Oxacycle
Ether
Dialkyl ether
Acetal
Carboxylic acid derivative
Monocarboxylic acid or derivatives
Polyol
Primary alcohol
Alcohol
Hydrocarbon derivative
Organic oxide
Organic oxygen compound
Carbonyl group
Organooxygen compound
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	0.33	ALOGPS
logP	-0.016	ChemAxon
logS	-3.1	ALOGPS
pKa (Strongest Acidic)	11.98	ChemAxon
pKa (Strongest Basic)	-3	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	13	ChemAxon
Hydrogen Donor Count	6	ChemAxon
Polar Surface Area	203.06 Å²	ChemAxon
Rotatable Bond Count	6	ChemAxon
Refractivity	170.41 m³·mol⁻¹	ChemAxon
Polarizability	76.63 Å³	ChemAxon
Number of Rings	8	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for 2'-hydroxy-16'-[(3-hydroxy-4-methoxy-6-methyl-5-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl)oxy]-13'-methyl-7'-oxaspiro[oxolane-3,6'-pentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosan]-5-one (NP0313445)

MOL for NP0313445 (2'-hydroxy-16'-[(3-hydroxy-4-methoxy-6-methyl-5-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl)oxy]-13'-methyl-7'-oxaspiro[oxolane-3,6'-pentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosan]-5-one)

3D MOL for NP0313445 (2'-hydroxy-16'-[(3-hydroxy-4-methoxy-6-methyl-5-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl)oxy]-13'-methyl-7'-oxaspiro[oxolane-3,6'-pentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosan]-5-one)

3D SDF for NP0313445 (2'-hydroxy-16'-[(3-hydroxy-4-methoxy-6-methyl-5-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl)oxy]-13'-methyl-7'-oxaspiro[oxolane-3,6'-pentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosan]-5-one)

3D-SDF for NP0313445 (2'-hydroxy-16'-[(3-hydroxy-4-methoxy-6-methyl-5-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl)oxy]-13'-methyl-7'-oxaspiro[oxolane-3,6'-pentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosan]-5-one)

PDB for NP0313445 (2'-hydroxy-16'-[(3-hydroxy-4-methoxy-6-methyl-5-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl)oxy]-13'-methyl-7'-oxaspiro[oxolane-3,6'-pentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosan]-5-one)

3D PDB for NP0313445 (2'-hydroxy-16'-[(3-hydroxy-4-methoxy-6-methyl-5-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl)oxy]-13'-methyl-7'-oxaspiro[oxolane-3,6'-pentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosan]-5-one)

SMILES for NP0313445 (2'-hydroxy-16'-[(3-hydroxy-4-methoxy-6-methyl-5-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl)oxy]-13'-methyl-7'-oxaspiro[oxolane-3,6'-pentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosan]-5-one)

INCHI for NP0313445 (2'-hydroxy-16'-[(3-hydroxy-4-methoxy-6-methyl-5-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl)oxy]-13'-methyl-7'-oxaspiro[oxolane-3,6'-pentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosan]-5-one)

Structure for NP0313445 (2'-hydroxy-16'-[(3-hydroxy-4-methoxy-6-methyl-5-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl)oxy]-13'-methyl-7'-oxaspiro[oxolane-3,6'-pentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosan]-5-one)

3D Structure for NP0313445 (2'-hydroxy-16'-[(3-hydroxy-4-methoxy-6-methyl-5-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl)oxy]-13'-methyl-7'-oxaspiro[oxolane-3,6'-pentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosan]-5-one)