NP-MRD: Showing NP-Card for 2-({2-[(2-{7,11-dihydroxy-3a,3b,6,6,9a-pentamethyl-dodecahydro-1h-cyclopenta[a]phenanthren-1-yl}-6-methylhept-5-en-2-yl)oxy]-5-hydroxy-6-(hydroxymethyl)-3-[(3,4,5-trihydroxy-6-methyloxan-2-yl)oxy]oxan-4-yl}oxy)-6-methyloxane-3,4,5-triol (NP0312374)

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Record Information

Version

2.0

Created at

2022-09-11 09:06:45 UTC

Updated at

2022-09-11 09:06:45 UTC

NP-MRD ID

NP0312374

Secondary Accession Numbers

None

Natural Product Identification

Common Name

2-({2-[(2-{7,11-dihydroxy-3a,3b,6,6,9a-pentamethyl-dodecahydro-1h-cyclopenta[a]phenanthren-1-yl}-6-methylhept-5-en-2-yl)oxy]-5-hydroxy-6-(hydroxymethyl)-3-[(3,4,5-trihydroxy-6-methyloxan-2-yl)oxy]oxan-4-yl}oxy)-6-methyloxane-3,4,5-triol

Description

2-({2-[(2-{5,16-Dihydroxy-2,6,6,10,11-pentamethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]Heptadecan-14-yl}-6-methylhept-5-en-2-yl)oxy]-5-hydroxy-6-(hydroxymethyl)-3-[(3,4,5-trihydroxy-6-methyloxan-2-yl)oxy]oxan-4-yl}oxy)-6-methyloxane-3,4,5-triol belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units. 2-({2-[(2-{7,11-dihydroxy-3a,3b,6,6,9a-pentamethyl-dodecahydro-1h-cyclopenta[a]phenanthren-1-yl}-6-methylhept-5-en-2-yl)oxy]-5-hydroxy-6-(hydroxymethyl)-3-[(3,4,5-trihydroxy-6-methyloxan-2-yl)oxy]oxan-4-yl}oxy)-6-methyloxane-3,4,5-triol is found in Gynostemma pentaphyllum. 2-({2-[(2-{5,16-Dihydroxy-2,6,6,10,11-pentamethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]Heptadecan-14-yl}-6-methylhept-5-en-2-yl)oxy]-5-hydroxy-6-(hydroxymethyl)-3-[(3,4,5-trihydroxy-6-methyloxan-2-yl)oxy]oxan-4-yl}oxy)-6-methyloxane-3,4,5-triol is an extremely weak basic (essentially neutral) compound (based on its pKa).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1533004201501172D          

 64 70  0  0  0  0            999 V2000
    1.7775    3.2689    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9602    3.1560    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6494    2.3918    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1679    2.2790    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4788    1.5148    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0276    0.8635    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8448    0.9763    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1557    1.7405    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.3512    0.3250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1684    0.4378    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6748   -0.2135    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0403   -0.4392    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.2230   -0.5520    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0879   -1.3162    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4185   -1.9676    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0698   -1.4612    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2328   -2.4739    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1200   -3.2912    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7713   -3.7975    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -2.1868   -3.9930    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9249   -2.6189    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6955   -3.4114    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3784   -3.8744    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0297   -3.3680    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2274   -4.1690    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7494   -2.5921    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2812   -1.9614    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0009   -1.1854    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0934   -2.1066    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3737   -2.8825    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1858   -3.0277    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9055   -2.2518    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7176   -2.3970    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5297   -2.5422    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8100   -3.3182    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6221   -3.4634    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.2782   -3.9489    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9917   -4.3631    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9942   -4.7234    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4661   -3.8037    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9343   -4.4344    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1221   -4.2891    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8418   -3.5132    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5309   -4.2774    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2833    0.0993    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1006   -0.0136    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4115   -0.7777    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9051   -1.4291    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2160   -2.1933    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7096   -2.8446    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0332   -2.3061    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3441   -3.0703    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5396   -1.6548    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3568   -1.7676    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2287   -0.8906    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7351   -0.2393    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6742    2.9303    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4915    2.8175    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3634    3.6945    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8697    4.3458    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4539    3.8073    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7648    4.5715    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  7  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
  9 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 15 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  2  0  0  0  0
 20 21  1  0  0  0  0
 20 22  1  0  0  0  0
 15 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 26 28  1  0  0  0  0
 23 28  1  0  0  0  0
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 29 30  1  0  0  0  0
 29 31  1  0  0  0  0
 31 32  1  0  0  0  0
 32 33  1  0  0  0  0
 33 34  1  0  0  0  0
 33 35  1  0  0  0  0
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 36 37  1  0  0  0  0
 37 38  1  0  0  0  0
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 39 40  1  0  0  0  0
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 45 46  1  0  0  0  0
 13 47  1  0  0  0  0
  6 47  1  0  0  0  0
 47 48  1  0  0  0  0
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 49 50  1  0  0  0  0
 50 51  1  0  0  0  0
 51 52  1  0  0  0  0
 51 53  1  0  0  0  0
 53 54  1  0  0  0  0
 53 55  1  0  0  0  0
 55 56  1  0  0  0  0
 55 57  1  0  0  0  0
 49 57  1  0  0  0  0
 57 58  1  0  0  0  0
  4 59  1  0  0  0  0
 59 60  1  0  0  0  0
 59 61  1  0  0  0  0
 61 62  1  0  0  0  0
 61 63  1  0  0  0  0
  2 63  1  0  0  0  0
 63 64  1  0  0  0  0
M  END

     RDKit          3D

146152  0  0  0  0  0  0  0  0999 V2000
    3.0312    5.9280    0.1678 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6745    6.3645    0.5949 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6269    7.0745    1.9281 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6018    6.1574   -0.1137 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4876    5.4986   -1.3870 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4842    4.4405   -1.6144 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4086    3.1352   -0.7812 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.6732    3.6665    0.6548 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3331    2.3295   -1.0784 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0568    1.5069   -1.6581 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.2978    2.0547   -2.1800 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6439    1.3427   -3.2892 C   0  0  2  0  0  0  0  0  0  0  0  0
   -5.1535    1.4128   -3.5667 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8633    0.8936   -2.4899 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2308   -0.0955   -3.2916 C   0  0  2  0  0  0  0  0  0  0  0  0
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   -3.2539   -4.9270    1.5121 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8025   -5.5379   -0.7632 C   0  0  1  0  0  0  0  0  0  0  0  0
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   -3.7809    1.9063    1.7148 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3199    1.7852    3.0259 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.6223    3.0310    3.8000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9502    0.6034    3.7216 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.2853    0.9531    5.0213 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1892    0.1318    3.0214 C   0  0  2  0  0  0  0  0  0  0  0  0
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    2.2739    1.0896   -2.2433 C   0  0  0  0  0  0  0  0  0  0  0  0
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    4.0748    0.5243    1.0750 C   0  0  0  0  0  0  0  0  0  0  0  0
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    6.4015   -2.3026    2.7885 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1457   -4.2670    2.1549 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4811   -2.9803    0.4778 C   0  0  1  0  0  0  0  0  0  0  0  0
    7.4734   -3.9438    0.7902 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7725   -3.4187   -0.7356 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4176   -2.8995   -0.9983 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -0.3281    6.5556    0.3407 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5114    5.3017   -1.7962 H   0  0  0  0  0  0  0  0  0  0  0  0
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M  END


  Mrv1533004201501172D          

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> <DATABASE_ID>
NP0312374

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC1OC(OC2C(O)C(CO)OC(OC(C)(CCC=C(C)C)C3CCC4(C)C3C(O)CC3C5(C)CCC(O)C(C)(C)C5CCC43C)C2OC2OC(C)C(O)C(O)C2O)C(O)C(O)C1O

> <INCHI_IDENTIFIER>
InChI=1S/C48H82O16/c1-22(2)12-11-16-48(10,25-13-18-47(9)31(25)26(50)20-29-45(7)17-15-30(51)44(5,6)28(45)14-19-46(29,47)8)64-43-40(63-42-38(58)36(56)33(53)24(4)60-42)39(34(54)27(21-49)61-43)62-41-37(57)35(55)32(52)23(3)59-41/h12,23-43,49-58H,11,13-21H2,1-10H3

> <INCHI_KEY>
ODMVWKYXDPIZMW-UHFFFAOYSA-N

> <FORMULA>
C48H82O16

> <MOLECULAR_WEIGHT>
915.168

> <EXACT_MASS>
914.56028656

> <JCHEM_ACCEPTOR_COUNT>
16

> <JCHEM_ATOM_COUNT>
146

> <JCHEM_AVERAGE_POLARIZABILITY>
100.34462234994466

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
10

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
2-({2-[(2-{5,16-dihydroxy-2,6,6,10,11-pentamethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadecan-14-yl}-6-methylhept-5-en-2-yl)oxy]-5-hydroxy-6-(hydroxymethyl)-3-[(3,4,5-trihydroxy-6-methyloxan-2-yl)oxy]oxan-4-yl}oxy)-6-methyloxane-3,4,5-triol

> <ALOGPS_LOGP>
2.34

> <JCHEM_LOGP>
2.313250801333333

> <ALOGPS_LOGS>
-3.80

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
7

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
12.383839973386912

> <JCHEM_PKA_STRONGEST_ACIDIC>
11.890255312970508

> <JCHEM_PKA_STRONGEST_BASIC>
-2.9810911230206427

> <JCHEM_POLAR_SURFACE_AREA>
257.67999999999995

> <JCHEM_REFRACTIVITY>
231.38840000000008

> <JCHEM_ROTATABLE_BOND_COUNT>
11

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
1.46e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
2-({2-[(2-{5,16-dihydroxy-2,6,6,10,11-pentamethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadecan-14-yl}-6-methylhept-5-en-2-yl)oxy]-5-hydroxy-6-(hydroxymethyl)-3-[(3,4,5-trihydroxy-6-methyloxan-2-yl)oxy]oxan-4-yl}oxy)-6-methyloxane-3,4,5-triol

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 20-APR-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   20-APR-15         0                                  
HETATM    1  C   UNK     0       3.318   6.102   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       1.792   5.891   0.000  0.00  0.00           C+0
HETATM    3  O   UNK     0       1.212   4.465   0.000  0.00  0.00           O+0
HETATM    4  C   UNK     0      -0.313   4.254   0.000  0.00  0.00           C+0
HETATM    5  O   UNK     0      -0.894   2.828   0.000  0.00  0.00           O+0
HETATM    6  C   UNK     0       0.051   1.612   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       1.577   1.822   0.000  0.00  0.00           C+0
HETATM    8  O   UNK     0       2.157   3.249   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0       2.522   0.607   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       4.048   0.817   0.000  0.00  0.00           C+0
HETATM   11  O   UNK     0       4.993  -0.399   0.000  0.00  0.00           O+0
HETATM   12  O   UNK     0       1.942  -0.820   0.000  0.00  0.00           O+0
HETATM   13  C   UNK     0       0.416  -1.030   0.000  0.00  0.00           C+0
HETATM   14  O   UNK     0      -0.164  -2.457   0.000  0.00  0.00           O+0
HETATM   15  C   UNK     0       0.781  -3.673   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       1.997  -2.728   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      -0.435  -4.618   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      -0.224  -6.143   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      -1.440  -7.089   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      -2.866  -6.508   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      -3.077  -4.983   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      -4.082  -7.454   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       1.726  -4.889   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       1.298  -6.368   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       2.573  -7.232   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       3.789  -6.287   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       4.158  -7.782   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0       3.266  -4.839   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       4.258  -3.661   0.000  0.00  0.00           C+0
HETATM   30  O   UNK     0       3.735  -2.213   0.000  0.00  0.00           O+0
HETATM   31  C   UNK     0       5.774  -3.932   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0       6.297  -5.381   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0       7.813  -5.652   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0       7.290  -4.203   0.000  0.00  0.00           C+0
HETATM   35  C   UNK     0       8.806  -4.474   0.000  0.00  0.00           C+0
HETATM   36  C   UNK     0      10.322  -4.746   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0      10.845  -6.194   0.000  0.00  0.00           C+0
HETATM   38  O   UNK     0      12.361  -6.465   0.000  0.00  0.00           O+0
HETATM   39  C   UNK     0       9.853  -7.371   0.000  0.00  0.00           C+0
HETATM   40  C   UNK     0      11.184  -8.144   0.000  0.00  0.00           C+0
HETATM   41  C   UNK     0       9.322  -8.817   0.000  0.00  0.00           C+0
HETATM   42  C   UNK     0       8.337  -7.100   0.000  0.00  0.00           C+0
HETATM   43  C   UNK     0       7.344  -8.277   0.000  0.00  0.00           C+0
HETATM   44  C   UNK     0       5.828  -8.006   0.000  0.00  0.00           C+0
HETATM   45  C   UNK     0       5.305  -6.558   0.000  0.00  0.00           C+0
HETATM   46  C   UNK     0       4.724  -7.984   0.000  0.00  0.00           C+0
HETATM   47  C   UNK     0      -0.529   0.185   0.000  0.00  0.00           C+0
HETATM   48  O   UNK     0      -2.054  -0.025   0.000  0.00  0.00           O+0
HETATM   49  C   UNK     0      -2.635  -1.452   0.000  0.00  0.00           C+0
HETATM   50  O   UNK     0      -1.690  -2.668   0.000  0.00  0.00           O+0
HETATM   51  C   UNK     0      -2.270  -4.094   0.000  0.00  0.00           C+0
HETATM   52  C   UNK     0      -1.325  -5.310   0.000  0.00  0.00           C+0
HETATM   53  C   UNK     0      -3.795  -4.305   0.000  0.00  0.00           C+0
HETATM   54  O   UNK     0      -4.376  -5.731   0.000  0.00  0.00           O+0
HETATM   55  C   UNK     0      -4.741  -3.089   0.000  0.00  0.00           C+0
HETATM   56  O   UNK     0      -6.266  -3.300   0.000  0.00  0.00           O+0
HETATM   57  C   UNK     0      -4.160  -1.662   0.000  0.00  0.00           C+0
HETATM   58  O   UNK     0      -5.105  -0.447   0.000  0.00  0.00           O+0
HETATM   59  C   UNK     0      -1.259   5.470   0.000  0.00  0.00           C+0
HETATM   60  O   UNK     0      -2.784   5.259   0.000  0.00  0.00           O+0
HETATM   61  C   UNK     0      -0.678   6.896   0.000  0.00  0.00           C+0
HETATM   62  O   UNK     0      -1.623   8.112   0.000  0.00  0.00           O+0
HETATM   63  C   UNK     0       0.847   7.107   0.000  0.00  0.00           C+0
HETATM   64  O   UNK     0       1.428   8.533   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3   63                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5   59                                                  
CONECT    5    4    6                                                       
CONECT    6    5    7   47                                                  
CONECT    7    6    8    9                                                  
CONECT    8    7                                                            
CONECT    9    7   10   12                                                  
CONECT   10    9   11                                                       
CONECT   11   10                                                            
CONECT   12    9   13                                                       
CONECT   13   12   14   47                                                  
CONECT   14   13   15                                                       
CONECT   15   14   16   17   23                                             
CONECT   16   15                                                            
CONECT   17   15   18                                                       
CONECT   18   17   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   21   22                                                  
CONECT   21   20                                                            
CONECT   22   20                                                            
CONECT   23   15   24   28                                                  
CONECT   24   23   25                                                       
CONECT   25   24   26                                                       
CONECT   26   25   27   28   45                                             
CONECT   27   26                                                            
CONECT   28   26   23   29                                                  
CONECT   29   28   30   31                                                  
CONECT   30   29                                                            
CONECT   31   29   32                                                       
CONECT   32   31   33   45                                                  
CONECT   33   32   34   35   42                                             
CONECT   34   33                                                            
CONECT   35   33   36                                                       
CONECT   36   35   37                                                       
CONECT   37   36   38   39                                                  
CONECT   38   37                                                            
CONECT   39   37   40   41   42                                             
CONECT   40   39                                                            
CONECT   41   39                                                            
CONECT   42   39   33   43                                                  
CONECT   43   42   44                                                       
CONECT   44   43   45                                                       
CONECT   45   44   26   32   46                                             
CONECT   46   45                                                            
CONECT   47   13    6   48                                                  
CONECT   48   47   49                                                       
CONECT   49   48   50   57                                                  
CONECT   50   49   51                                                       
CONECT   51   50   52   53                                                  
CONECT   52   51                                                            
CONECT   53   51   54   55                                                  
CONECT   54   53                                                            
CONECT   55   53   56   57                                                  
CONECT   56   55                                                            
CONECT   57   55   49   58                                                  
CONECT   58   57                                                            
CONECT   59    4   60   61                                                  
CONECT   60   59                                                            
CONECT   61   59   62   63                                                  
CONECT   62   61                                                            
CONECT   63   61    2   64                                                  
CONECT   64   63                                                            
MASTER        0    0    0    0    0    0    0    0   64    0  140    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₄₈H₈₂O₁₆

Average Mass

915.1680 Da

Monoisotopic Mass

914.56029 Da

IUPAC Name

2-({2-[(2-{5,16-dihydroxy-2,6,6,10,11-pentamethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadecan-14-yl}-6-methylhept-5-en-2-yl)oxy]-5-hydroxy-6-(hydroxymethyl)-3-[(3,4,5-trihydroxy-6-methyloxan-2-yl)oxy]oxan-4-yl}oxy)-6-methyloxane-3,4,5-triol

Traditional Name

CAS Registry Number

Not Available

SMILES

CC1OC(OC2C(O)C(CO)OC(OC(C)(CCC=C(C)C)C3CCC4(C)C3C(O)CC3C5(C)CCC(O)C(C)(C)C5CCC43C)C2OC2OC(C)C(O)C(O)C2O)C(O)C(O)C1O

InChI Identifier

InChI=1S/C48H82O16/c1-22(2)12-11-16-48(10,25-13-18-47(9)31(25)26(50)20-29-45(7)17-15-30(51)44(5,6)28(45)14-19-46(29,47)8)64-43-40(63-42-38(58)36(56)33(53)24(4)60-42)39(34(54)27(21-49)61-43)62-41-37(57)35(55)32(52)23(3)59-41/h12,23-43,49-58H,11,13-21H2,1-10H3

InChI Key

ODMVWKYXDPIZMW-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Gynostemma pentaphyllum	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Triterpenoids

Direct Parent

Triterpenoids

Alternative Parents

Substituents

Triterpenoid
Oligosaccharide
3-hydroxysteroid
12-hydroxysteroid
Hydroxysteroid
Steroid
Fatty acyl glycoside
Alkyl glycoside
O-glycosyl compound
Glycosyl compound
Oxane
Fatty acyl
Cyclic alcohol
Secondary alcohol
Organoheterocyclic compound
Polyol
Acetal
Oxacycle
Primary alcohol
Organic oxygen compound
Hydrocarbon derivative
Alcohol
Organooxygen compound
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.34	ALOGPS
logP	2.31	ChemAxon
logS	-3.8	ALOGPS
pKa (Strongest Acidic)	11.89	ChemAxon
pKa (Strongest Basic)	-3	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	16	ChemAxon
Hydrogen Donor Count	10	ChemAxon
Polar Surface Area	257.68 Å²	ChemAxon
Rotatable Bond Count	11	ChemAxon
Refractivity	231.39 m³·mol⁻¹	ChemAxon
Polarizability	100.34 Å³	ChemAxon
Number of Rings	7	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for 2-({2-[(2-{7,11-dihydroxy-3a,3b,6,6,9a-pentamethyl-dodecahydro-1h-cyclopenta[a]phenanthren-1-yl}-6-methylhept-5-en-2-yl)oxy]-5-hydroxy-6-(hydroxymethyl)-3-[(3,4,5-trihydroxy-6-methyloxan-2-yl)oxy]oxan-4-yl}oxy)-6-methyloxane-3,4,5-triol (NP0312374)

MOL for NP0312374 (2-({2-[(2-{7,11-dihydroxy-3a,3b,6,6,9a-pentamethyl-dodecahydro-1h-cyclopenta[a]phenanthren-1-yl}-6-methylhept-5-en-2-yl)oxy]-5-hydroxy-6-(hydroxymethyl)-3-[(3,4,5-trihydroxy-6-methyloxan-2-yl)oxy]oxan-4-yl}oxy)-6-methyloxane-3,4,5-triol)

3D MOL for NP0312374 (2-({2-[(2-{7,11-dihydroxy-3a,3b,6,6,9a-pentamethyl-dodecahydro-1h-cyclopenta[a]phenanthren-1-yl}-6-methylhept-5-en-2-yl)oxy]-5-hydroxy-6-(hydroxymethyl)-3-[(3,4,5-trihydroxy-6-methyloxan-2-yl)oxy]oxan-4-yl}oxy)-6-methyloxane-3,4,5-triol)

3D SDF for NP0312374 (2-({2-[(2-{7,11-dihydroxy-3a,3b,6,6,9a-pentamethyl-dodecahydro-1h-cyclopenta[a]phenanthren-1-yl}-6-methylhept-5-en-2-yl)oxy]-5-hydroxy-6-(hydroxymethyl)-3-[(3,4,5-trihydroxy-6-methyloxan-2-yl)oxy]oxan-4-yl}oxy)-6-methyloxane-3,4,5-triol)

3D-SDF for NP0312374 (2-({2-[(2-{7,11-dihydroxy-3a,3b,6,6,9a-pentamethyl-dodecahydro-1h-cyclopenta[a]phenanthren-1-yl}-6-methylhept-5-en-2-yl)oxy]-5-hydroxy-6-(hydroxymethyl)-3-[(3,4,5-trihydroxy-6-methyloxan-2-yl)oxy]oxan-4-yl}oxy)-6-methyloxane-3,4,5-triol)

PDB for NP0312374 (2-({2-[(2-{7,11-dihydroxy-3a,3b,6,6,9a-pentamethyl-dodecahydro-1h-cyclopenta[a]phenanthren-1-yl}-6-methylhept-5-en-2-yl)oxy]-5-hydroxy-6-(hydroxymethyl)-3-[(3,4,5-trihydroxy-6-methyloxan-2-yl)oxy]oxan-4-yl}oxy)-6-methyloxane-3,4,5-triol)

3D PDB for NP0312374 (2-({2-[(2-{7,11-dihydroxy-3a,3b,6,6,9a-pentamethyl-dodecahydro-1h-cyclopenta[a]phenanthren-1-yl}-6-methylhept-5-en-2-yl)oxy]-5-hydroxy-6-(hydroxymethyl)-3-[(3,4,5-trihydroxy-6-methyloxan-2-yl)oxy]oxan-4-yl}oxy)-6-methyloxane-3,4,5-triol)

SMILES for NP0312374 (2-({2-[(2-{7,11-dihydroxy-3a,3b,6,6,9a-pentamethyl-dodecahydro-1h-cyclopenta[a]phenanthren-1-yl}-6-methylhept-5-en-2-yl)oxy]-5-hydroxy-6-(hydroxymethyl)-3-[(3,4,5-trihydroxy-6-methyloxan-2-yl)oxy]oxan-4-yl}oxy)-6-methyloxane-3,4,5-triol)

INCHI for NP0312374 (2-({2-[(2-{7,11-dihydroxy-3a,3b,6,6,9a-pentamethyl-dodecahydro-1h-cyclopenta[a]phenanthren-1-yl}-6-methylhept-5-en-2-yl)oxy]-5-hydroxy-6-(hydroxymethyl)-3-[(3,4,5-trihydroxy-6-methyloxan-2-yl)oxy]oxan-4-yl}oxy)-6-methyloxane-3,4,5-triol)

Structure for NP0312374 (2-({2-[(2-{7,11-dihydroxy-3a,3b,6,6,9a-pentamethyl-dodecahydro-1h-cyclopenta[a]phenanthren-1-yl}-6-methylhept-5-en-2-yl)oxy]-5-hydroxy-6-(hydroxymethyl)-3-[(3,4,5-trihydroxy-6-methyloxan-2-yl)oxy]oxan-4-yl}oxy)-6-methyloxane-3,4,5-triol)

3D Structure for NP0312374 (2-({2-[(2-{7,11-dihydroxy-3a,3b,6,6,9a-pentamethyl-dodecahydro-1h-cyclopenta[a]phenanthren-1-yl}-6-methylhept-5-en-2-yl)oxy]-5-hydroxy-6-(hydroxymethyl)-3-[(3,4,5-trihydroxy-6-methyloxan-2-yl)oxy]oxan-4-yl}oxy)-6-methyloxane-3,4,5-triol)