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Record Information
Version2.0
Created at2022-09-11 06:51:00 UTC
Updated at2022-09-11 06:51:00 UTC
NP-MRD IDNP0311086
Secondary Accession NumbersNone
Natural Product Identification
Common Name(3ar,4r,6s,7r,7ar)-6-ethenyl-6-methyl-3-methylidene-2-oxo-7-(prop-1-en-2-yl)-tetrahydro-3ah-1-benzofuran-4-yl acetate
DescriptionElemanolide belongs to the class of organic compounds known as diterpenoids. These are terpene compounds formed by four isoprene units. (3ar,4r,6s,7r,7ar)-6-ethenyl-6-methyl-3-methylidene-2-oxo-7-(prop-1-en-2-yl)-tetrahydro-3ah-1-benzofuran-4-yl acetate is found in Ageratina palmeri, Centaurea stoebe and Onopordum acaulon. (3ar,4r,6s,7r,7ar)-6-ethenyl-6-methyl-3-methylidene-2-oxo-7-(prop-1-en-2-yl)-tetrahydro-3ah-1-benzofuran-4-yl acetate was first documented in 2017 (PMID: 29062416). Based on a literature review a small amount of articles have been published on Elemanolide (PMID: 33360528) (PMID: 32870011) (PMID: 30496812) (PMID: 28675942).
Structure
Thumb
SynonymsNot Available
Chemical FormulaC17H22O4
Average Mass290.3590 Da
Monoisotopic Mass290.15181 Da
IUPAC Name(3aR,4R,6S,7R,7aR)-6-ethenyl-6-methyl-3-methylidene-2-oxo-7-(prop-1-en-2-yl)-octahydro-1-benzofuran-4-yl acetate
Traditional Name(3aR,4R,6S,7R,7aR)-6-ethenyl-6-methyl-3-methylidene-2-oxo-7-(prop-1-en-2-yl)-tetrahydro-3aH-1-benzofuran-4-yl acetate
CAS Registry NumberNot Available
SMILES
CC(=O)O[C@@H]1C[C@@](C)(C=C)[C@H]([C@H]2OC(=O)C(=C)[C@H]12)C(C)=C
InChI Identifier
InChI=1S/C17H22O4/c1-7-17(6)8-12(20-11(5)18)13-10(4)16(19)21-15(13)14(17)9(2)3/h7,12-15H,1-2,4,8H2,3,5-6H3/t12-,13-,14+,15+,17-/m1/s1
InChI KeyOTDCMOJEHBGCAO-LFYQSXPISA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Ageratina palmeriLOTUS Database
Centaurea stoebeLOTUS Database
Onopordum acaulonLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as diterpenoids. These are terpene compounds formed by four isoprene units.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassDiterpenoids
Direct ParentDiterpenoids
Alternative Parents
Substituents
  • Diterpenoid
  • Elemanolide-skeleton
  • Benzofuran
  • Gamma butyrolactone
  • Dicarboxylic acid or derivatives
  • Alpha,beta-unsaturated carboxylic ester
  • Enoate ester
  • Tetrahydrofuran
  • Lactone
  • Carboxylic acid ester
  • Oxacycle
  • Organoheterocyclic compound
  • Carboxylic acid derivative
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Carbonyl group
  • Aliphatic heteropolycyclic compound
Molecular FrameworkAliphatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP2.69ChemAxon
pKa (Strongest Basic)-6.6ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count2ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area52.6 ŲChemAxon
Rotatable Bond Count4ChemAxon
Refractivity78.69 m³·mol⁻¹ChemAxon
Polarizability30.88 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDC00012037
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound112500441
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Sirignano C, Hammami S, El Mokni R, Blagborough AM, Luciano P, Rigano D, Scafati OT: Polyoxygenated germacranes from Daucus carota and their antimalarial transmission blocking activity. Phytochemistry. 2021 Mar;183:112632. doi: 10.1016/j.phytochem.2020.112632. Epub 2020 Dec 23. [PubMed:33360528 ]
  2. Reyes-Perez VI, Granados-Soto V, Rangel-Grimaldo M, Deciga-Campos M, Mata R: Pharmacological Analysis of the Anti-inflammatory and Antiallodynic Effects of Zinagrandinolide E from Zinnia grandiflora in Mice. J Nat Prod. 2021 Mar 26;84(3):713-723. doi: 10.1021/acs.jnatprod.0c00793. Epub 2020 Sep 1. [PubMed:32870011 ]
  3. Yang P, Zhu W, Xu J, Liu W, Dong Z, Kikuchi T, Yamada T, Xie N, Feng F, Zhang J: Sesquiterpenoids and triterpenoids from Secamone lanceolata blume with inhibitory effects on nitric oxide production. Fitoterapia. 2019 Mar;133:5-11. doi: 10.1016/j.fitote.2018.11.016. Epub 2018 Nov 27. [PubMed:30496812 ]
  4. Barquera-Lozada JE, Cuevas G: Are boat transition states likely to occur in Cope rearrangements? A DFT study of the biogenesis of germacranes. Beilstein J Org Chem. 2017 Sep 19;13:1969-1976. doi: 10.3762/bjoc.13.192. eCollection 2017. [PubMed:29062416 ]
  5. Turak A, Aisa HA: Three new elemanolides from the seeds of Vernonia anthelmintica. J Asian Nat Prod Res. 2018 Apr;20(4):313-320. doi: 10.1080/10286020.2017.1343304. Epub 2017 Jul 4. [PubMed:28675942 ]
  6. LOTUS database [Link]