NP-MRD: Showing NP-Card for (1r,2s,5s,6r,13s,14r,15s,17s,18s)-6-(furan-3-yl)-13-hydroxy-18-(2-methoxy-2-oxoethyl)-1,5,15-trimethyl-14-{[(2s)-2-methylbutanoyl]oxy}-8,12-dioxo-7-oxapentacyclo[13.2.1.0²,¹¹.0⁵,¹⁰.0¹³,¹⁷]octadec-10-en-17-yl (2s)-2-methylbutanoate (NP0309899)

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Record Information

Version

2.0

Created at

2022-09-11 04:48:20 UTC

Updated at

2022-09-11 04:48:20 UTC

NP-MRD ID

NP0309899

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(1r,2s,5s,6r,13s,14r,15s,17s,18s)-6-(furan-3-yl)-13-hydroxy-18-(2-methoxy-2-oxoethyl)-1,5,15-trimethyl-14-{[(2s)-2-methylbutanoyl]oxy}-8,12-dioxo-7-oxapentacyclo[13.2.1.0²,¹¹.0⁵,¹⁰.0¹³,¹⁷]octadec-10-en-17-yl (2s)-2-methylbutanoate

Description

(1R,2S,5S,6R,13S,14R,15S,17S,18S)-6-(furan-3-yl)-13-hydroxy-18-(2-methoxy-2-oxoethyl)-1,5,15-trimethyl-14-{[(2S)-2-methylbutanoyl]oxy}-8,12-dioxo-7-oxapentacyclo[13.2.1.0²,¹¹.0⁵,¹⁰.0¹³,¹⁷]Octadec-10-en-17-yl (2S)-2-methylbutanoate belongs to the class of organic compounds known as limonoids. These are highly oxygenated, modified terpenoids with a prototypical structure either containing or derived from a precursor with a 4,4,8-trimethyl-17-furanylsteroid skeleton. All naturally occurring citrus limonoids contain a furan ring attached to the D-ring, at C-17, as well as oxygen containing functional groups at C-3, C-4, C-7, C-16 and C-17. (1r,2s,5s,6r,13s,14r,15s,17s,18s)-6-(furan-3-yl)-13-hydroxy-18-(2-methoxy-2-oxoethyl)-1,5,15-trimethyl-14-{[(2s)-2-methylbutanoyl]oxy}-8,12-dioxo-7-oxapentacyclo[13.2.1.0²,¹¹.0⁵,¹⁰.0¹³,¹⁷]octadec-10-en-17-yl (2s)-2-methylbutanoate is found in Xylocarpus moluccensis. Based on a literature review very few articles have been published on (1R,2S,5S,6R,13S,14R,15S,17S,18S)-6-(furan-3-yl)-13-hydroxy-18-(2-methoxy-2-oxoethyl)-1,5,15-trimethyl-14-{[(2S)-2-methylbutanoyl]oxy}-8,12-dioxo-7-oxapentacyclo[13.2.1.0²,¹¹.0⁵,¹⁰.0¹³,¹⁷]Octadec-10-en-17-yl (2S)-2-methylbutanoate.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309112206482D          

 48 53  0  0  1  0            999 V2000
   -4.6113    1.3893    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8863    0.9669    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -2.3795    0.8725    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7786    0.1293    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5107    0.8668    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7166    0.4223    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.6106   -0.4076    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.3887   -0.6867    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2187    0.4295    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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  1  2  1  0  0  0  0
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 45 46  2  0  0  0  0
 45 47  1  0  0  0  0
 47 48  1  0  0  0  0
M  END

     RDKit          3D

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  2  3  1  0
  3  4  1  0
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 12 41  1  0
 41 42  1  6
 41 43  1  0
 43 44  1  0
 44 45  1  0
 45 46  2  0
 45 47  1  0
 47 48  1  0
 41 40  1  0
 40 39  1  0
 39 38  1  0
 38 36  1  0
 36 37  1  1
 36 30  1  0
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 29 27  1  0
 27 28  2  0
 27 26  1  0
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 24 22  1  0
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 22 20  1  0
 20 21  1  1
 30 31  1  0
 31 35  2  0
 35 34  1  0
 34 33  1  0
 33 32  2  0
 20  8  1  0
 32 31  1  0
 43  9  1  0
 24 40  1  0
 20 12  1  0
 25 36  1  0
  1 49  1  0
  1 50  1  0
  1 51  1  0
  2 52  1  0
  2 53  1  0
  3 54  1  6
  4 55  1  0
  4 56  1  0
  4 57  1  0
  8 58  1  1
 10 59  1  0
 10 60  1  0
 10 61  1  0
 11 62  1  0
 11 63  1  0
 16 64  1  1
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 17 67  1  0
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 18 69  1  0
 19 70  1  0
 19 71  1  0
 19 72  1  0
 42 88  1  0
 42 89  1  0
 42 90  1  0
 43 91  1  6
 44 92  1  0
 44 93  1  0
 48 94  1  0
 48 95  1  0
 48 96  1  0
 40 87  1  1
 39 85  1  0
 39 86  1  0
 38 83  1  0
 38 84  1  0
 37 80  1  0
 37 81  1  0
 37 82  1  0
 30 76  1  1
 26 74  1  0
 26 75  1  0
 21 73  1  0
 35 79  1  0
 33 78  1  0
 32 77  1  0
M  END


  Mrv1652309112206482D          

 48 53  0  0  1  0            999 V2000
   -4.6113    1.3893    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8863    0.9669    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1042    1.3403    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.0088    2.1883    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3795    0.8725    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7786    0.1293    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5107    0.8668    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7166    0.4223    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.6106   -0.4076    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.3887   -0.6867    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2187    0.4295    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3822   -0.1837    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.2898    0.0146    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8948    0.8362    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0688    1.3050    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8348    1.3226    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.4445    0.5580    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0512    2.2356    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7215    3.0368    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3604    0.5551    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.1100    1.4290    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2335    0.5873    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5823    1.5109    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8049   -0.0701    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6216    0.0465    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9289    0.8121    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7457    0.9287    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2736    1.6727    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2550    0.2797    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.9476   -0.4859    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.4570   -1.1349    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2814   -1.1043    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5653   -1.8789    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9163   -2.3882    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2313   -1.9284    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1309   -0.6025    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.4866   -1.4000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8236   -1.3681    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0068   -1.4847    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4975   -0.8357    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.6438   -0.9469    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.7065   -1.8168    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1661   -1.1698    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.6476   -1.9247    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3525   -2.4419    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1551   -2.1577    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5507   -3.2802    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3453   -3.5969    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  6  0  0  0
  3  5  1  0  0  0  0
  5  6  2  0  0  0  0
  5  7  1  0  0  0  0
  8  7  1  1  0  0  0
  8  9  1  0  0  0  0
  9 10  1  6  0  0  0
  9 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  6  0  0  0
 13 14  1  0  0  0  0
 14 15  2  0  0  0  0
 14 16  1  0  0  0  0
 16 17  1  6  0  0  0
 16 18  1  0  0  0  0
 18 19  1  0  0  0  0
 12 20  1  0  0  0  0
  8 20  1  0  0  0  0
 20 21  1  6  0  0  0
 20 22  1  0  0  0  0
 22 23  2  0  0  0  0
 22 24  1  0  0  0  0
 24 25  2  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 27 28  2  0  0  0  0
 27 29  1  0  0  0  0
 29 30  1  0  0  0  0
 30 31  1  1  0  0  0
 31 32  1  0  0  0  0
 32 33  2  0  0  0  0
 33 34  1  0  0  0  0
 34 35  1  0  0  0  0
 31 35  2  0  0  0  0
 30 36  1  0  0  0  0
 25 36  1  0  0  0  0
 36 37  1  6  0  0  0
 36 38  1  0  0  0  0
 38 39  1  0  0  0  0
 40 39  1  1  0  0  0
 24 40  1  0  0  0  0
 40 41  1  0  0  0  0
 12 41  1  0  0  0  0
 41 42  1  6  0  0  0
 41 43  1  0  0  0  0
  9 43  1  0  0  0  0
 43 44  1  1  0  0  0
 44 45  1  0  0  0  0
 45 46  2  0  0  0  0
 45 47  1  0  0  0  0
 47 48  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0309899

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC[C@H](C)C(=O)O[C@@H]1[C@@]2(C)C[C@]3(OC(=O)[C@@H](C)CC)[C@](C)([C@H]2CC(=O)OC)[C@@H]2CC[C@]4(C)[C@@H](OC(=O)CC4=C2C(=O)[C@]13O)C1=COC=C1

> <INCHI_IDENTIFIER>
InChI=1S/C37H48O11/c1-9-19(3)30(41)47-32-34(6)18-36(48-31(42)20(4)10-2)35(7,24(34)16-25(38)44-8)22-11-13-33(5)23(27(22)28(40)37(32,36)43)15-26(39)46-29(33)21-12-14-45-17-21/h12,14,17,19-20,22,24,29,32,43H,9-11,13,15-16,18H2,1-8H3/t19-,20-,22+,24-,29-,32+,33-,34-,35-,36-,37-/m0/s1

> <INCHI_KEY>
NCGGTAGKBPGAMD-GZQCAWJQSA-N

> <FORMULA>
C37H48O11

> <MOLECULAR_WEIGHT>
668.78

> <EXACT_MASS>
668.319662366

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_ATOM_COUNT>
96

> <JCHEM_AVERAGE_POLARIZABILITY>
69.9435682037596

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(1R,2S,5S,6R,13S,14R,15S,17S,18S)-6-(furan-3-yl)-13-hydroxy-18-(2-methoxy-2-oxoethyl)-1,5,15-trimethyl-14-{[(2S)-2-methylbutanoyl]oxy}-8,12-dioxo-7-oxapentacyclo[13.2.1.0^{2,11}.0^{5,10}.0^{13,17}]octadec-10-en-17-yl (2S)-2-methylbutanoate

> <JCHEM_LOGP>
5.079483711666664

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
6

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
11.053308567227626

> <JCHEM_PKA_STRONGEST_BASIC>
-2.8887856396768283

> <JCHEM_POLAR_SURFACE_AREA>
155.64

> <JCHEM_REFRACTIVITY>
169.33660000000003

> <JCHEM_ROTATABLE_BOND_COUNT>
12

> <JCHEM_RULE_OF_FIVE>
0

> <JCHEM_TRADITIONAL_IUPAC>
(1R,2S,5S,6R,13S,14R,15S,17S,18S)-6-(furan-3-yl)-13-hydroxy-18-(2-methoxy-2-oxoethyl)-1,5,15-trimethyl-14-{[(2S)-2-methylbutanoyl]oxy}-8,12-dioxo-7-oxapentacyclo[13.2.1.0^{2,11}.0^{5,10}.0^{13,17}]octadec-10-en-17-yl (2S)-2-methylbutanoate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 11-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   11-SEP-22         0                                  
HETATM    1  C   UNK     0      -8.608   2.593   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -7.254   1.805   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -5.795   2.502   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -5.616   4.085   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      -4.442   1.629   0.000  0.00  0.00           C+0
HETATM    6  O   UNK     0      -5.187   0.241   0.000  0.00  0.00           O+0
HETATM    7  O   UNK     0      -2.820   1.618   0.000  0.00  0.00           O+0
HETATM    8  C   UNK     0      -1.338   0.788   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      -1.140  -0.761   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      -2.592  -1.282   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      -0.408   0.802   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       0.713  -0.343   0.000  0.00  0.00           C+0
HETATM   13  O   UNK     0       2.408   0.027   0.000  0.00  0.00           O+0
HETATM   14  C   UNK     0       3.537   1.561   0.000  0.00  0.00           C+0
HETATM   15  O   UNK     0       1.995   2.436   0.000  0.00  0.00           O+0
HETATM   16  C   UNK     0       5.292   2.469   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       6.430   1.042   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       5.696   4.173   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       5.080   5.669   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       0.673   1.036   0.000  0.00  0.00           C+0
HETATM   21  O   UNK     0       0.205   2.667   0.000  0.00  0.00           O+0
HETATM   22  C   UNK     0       2.303   1.096   0.000  0.00  0.00           C+0
HETATM   23  O   UNK     0       2.954   2.820   0.000  0.00  0.00           O+0
HETATM   24  C   UNK     0       3.369  -0.131   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       4.894   0.087   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       5.467   1.516   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       6.992   1.734   0.000  0.00  0.00           C+0
HETATM   28  O   UNK     0       7.977   3.122   0.000  0.00  0.00           O+0
HETATM   29  O   UNK     0       7.943   0.522   0.000  0.00  0.00           O+0
HETATM   30  C   UNK     0       7.369  -0.907   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0       8.320  -2.118   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0       9.859  -2.061   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0      10.389  -3.507   0.000  0.00  0.00           C+0
HETATM   34  O   UNK     0       9.177  -4.458   0.000  0.00  0.00           O+0
HETATM   35  C   UNK     0       7.899  -3.600   0.000  0.00  0.00           C+0
HETATM   36  C   UNK     0       5.844  -1.125   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0       6.508  -2.613   0.000  0.00  0.00           C+0
HETATM   38  C   UNK     0       5.271  -2.554   0.000  0.00  0.00           C+0
HETATM   39  C   UNK     0       3.746  -2.771   0.000  0.00  0.00           C+0
HETATM   40  C   UNK     0       2.795  -1.560   0.000  0.00  0.00           C+0
HETATM   41  C   UNK     0       1.202  -1.768   0.000  0.00  0.00           C+0
HETATM   42  C   UNK     0       1.319  -3.391   0.000  0.00  0.00           C+0
HETATM   43  C   UNK     0      -0.310  -2.184   0.000  0.00  0.00           C+0
HETATM   44  C   UNK     0      -1.209  -3.593   0.000  0.00  0.00           C+0
HETATM   45  C   UNK     0      -2.525  -4.558   0.000  0.00  0.00           C+0
HETATM   46  O   UNK     0      -4.023  -4.028   0.000  0.00  0.00           O+0
HETATM   47  O   UNK     0      -2.895  -6.123   0.000  0.00  0.00           O+0
HETATM   48  C   UNK     0      -4.378  -6.714   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3    6    7                                                  
CONECT    6    5                                                            
CONECT    7    5    8                                                       
CONECT    8    7    9   20                                                  
CONECT    9    8   10   11   43                                             
CONECT   10    9                                                            
CONECT   11    9   12                                                       
CONECT   12   11   13   20   41                                             
CONECT   13   12   14                                                       
CONECT   14   13   15   16                                                  
CONECT   15   14                                                            
CONECT   16   14   17   18                                                  
CONECT   17   16                                                            
CONECT   18   16   19                                                       
CONECT   19   18                                                            
CONECT   20   12    8   21   22                                             
CONECT   21   20                                                            
CONECT   22   20   23   24                                                  
CONECT   23   22                                                            
CONECT   24   22   25   40                                                  
CONECT   25   24   26   36                                                  
CONECT   26   25   27                                                       
CONECT   27   26   28   29                                                  
CONECT   28   27                                                            
CONECT   29   27   30                                                       
CONECT   30   29   31   36                                                  
CONECT   31   30   32   35                                                  
CONECT   32   31   33                                                       
CONECT   33   32   34                                                       
CONECT   34   33   35                                                       
CONECT   35   34   31                                                       
CONECT   36   30   25   37   38                                             
CONECT   37   36                                                            
CONECT   38   36   39                                                       
CONECT   39   38   40                                                       
CONECT   40   39   24   41                                                  
CONECT   41   40   12   42   43                                             
CONECT   42   41                                                            
CONECT   43   41    9   44                                                  
CONECT   44   43   45                                                       
CONECT   45   44   46   47                                                  
CONECT   46   45                                                            
CONECT   47   45   48                                                       
CONECT   48   47                                                            
MASTER        0    0    0    0    0    0    0    0   48    0  106    0
END

View in JSmol

Synonyms

Value	Source
(1R,2S,5S,6R,13S,14R,15S,17S,18S)-6-(Furan-3-yl)-13-hydroxy-18-(2-methoxy-2-oxoethyl)-1,5,15-trimethyl-14-{[(2S)-2-methylbutanoyl]oxy}-8,12-dioxo-7-oxapentacyclo[13.2.1.0,.0,.0,]octadec-10-en-17-yl (2S)-2-methylbutanoic acid	Generator

Chemical Formula

C₃₇H₄₈O₁₁

Average Mass

668.7800 Da

Monoisotopic Mass

668.31966 Da

IUPAC Name

Traditional Name

CAS Registry Number

Not Available

SMILES

CC[C@H](C)C(=O)O[C@@H]1[C@@]2(C)C[C@]3(OC(=O)[C@@H](C)CC)[C@](C)([C@H]2CC(=O)OC)[C@@H]2CC[C@]4(C)[C@@H](OC(=O)CC4=C2C(=O)[C@]13O)C1=COC=C1

InChI Identifier

InChI=1S/C37H48O11/c1-9-19(3)30(41)47-32-34(6)18-36(48-31(42)20(4)10-2)35(7,24(34)16-25(38)44-8)22-11-13-33(5)23(27(22)28(40)37(32,36)43)15-26(39)46-29(33)21-12-14-45-17-21/h12,14,17,19-20,22,24,29,32,43H,9-11,13,15-16,18H2,1-8H3/t19-,20-,22+,24-,29-,32+,33-,34-,35-,36-,37-/m0/s1

InChI Key

NCGGTAGKBPGAMD-GZQCAWJQSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Xylocarpus moluccensis	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as limonoids. These are highly oxygenated, modified terpenoids with a prototypical structure either containing or derived from a precursor with a 4,4,8-trimethyl-17-furanylsteroid skeleton. All naturally occurring citrus limonoids contain a furan ring attached to the D-ring, at C-17, as well as oxygen containing functional groups at C-3, C-4, C-7, C-16 and C-17.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Triterpenoids

Direct Parent

Limonoids

Alternative Parents

Substituents

Limonoid skeleton
Mexicanolide
Prostaglandin skeleton
Steroid lactone
Eicosanoid
12-hydroxysteroid
Hydroxysteroid
11-oxosteroid
12-beta-hydroxysteroid
Oxosteroid
2-oxosteroid
3-oxasteroid
Steroid
Naphthopyran
Tetracarboxylic acid or derivatives
Naphthalene
Delta valerolactone
Fatty acid ester
Delta_valerolactone
Pyran
Fatty acyl
Oxane
Cyclic alcohol
Tertiary alcohol
Furan
Methyl ester
Heteroaromatic compound
Ketone
Lactone
Carboxylic acid ester
Carboxylic acid derivative
Oxacycle
Organoheterocyclic compound
Hydrocarbon derivative
Organic oxide
Alcohol
Organic oxygen compound
Organooxygen compound
Carbonyl group
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	5.08	ChemAxon
pKa (Strongest Acidic)	11.05	ChemAxon
pKa (Strongest Basic)	-2.9	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	6	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	155.64 Å²	ChemAxon
Rotatable Bond Count	12	ChemAxon
Refractivity	169.34 m³·mol⁻¹	ChemAxon
Polarizability	69.94 Å³	ChemAxon
Number of Rings	6	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

162851779

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (1r,2s,5s,6r,13s,14r,15s,17s,18s)-6-(furan-3-yl)-13-hydroxy-18-(2-methoxy-2-oxoethyl)-1,5,15-trimethyl-14-{[(2s)-2-methylbutanoyl]oxy}-8,12-dioxo-7-oxapentacyclo[13.2.1.0²,¹¹.0⁵,¹⁰.0¹³,¹⁷]octadec-10-en-17-yl (2s)-2-methylbutanoate (NP0309899)

MOL for NP0309899 ((1r,2s,5s,6r,13s,14r,15s,17s,18s)-6-(furan-3-yl)-13-hydroxy-18-(2-methoxy-2-oxoethyl)-1,5,15-trimethyl-14-{[(2s)-2-methylbutanoyl]oxy}-8,12-dioxo-7-oxapentacyclo[13.2.1.0²,¹¹.0⁵,¹⁰.0¹³,¹⁷]octadec-10-en-17-yl (2s)-2-methylbutanoate)

3D MOL for NP0309899 ((1r,2s,5s,6r,13s,14r,15s,17s,18s)-6-(furan-3-yl)-13-hydroxy-18-(2-methoxy-2-oxoethyl)-1,5,15-trimethyl-14-{[(2s)-2-methylbutanoyl]oxy}-8,12-dioxo-7-oxapentacyclo[13.2.1.0²,¹¹.0⁵,¹⁰.0¹³,¹⁷]octadec-10-en-17-yl (2s)-2-methylbutanoate)

3D SDF for NP0309899 ((1r,2s,5s,6r,13s,14r,15s,17s,18s)-6-(furan-3-yl)-13-hydroxy-18-(2-methoxy-2-oxoethyl)-1,5,15-trimethyl-14-{[(2s)-2-methylbutanoyl]oxy}-8,12-dioxo-7-oxapentacyclo[13.2.1.0²,¹¹.0⁵,¹⁰.0¹³,¹⁷]octadec-10-en-17-yl (2s)-2-methylbutanoate)

3D-SDF for NP0309899 ((1r,2s,5s,6r,13s,14r,15s,17s,18s)-6-(furan-3-yl)-13-hydroxy-18-(2-methoxy-2-oxoethyl)-1,5,15-trimethyl-14-{[(2s)-2-methylbutanoyl]oxy}-8,12-dioxo-7-oxapentacyclo[13.2.1.0²,¹¹.0⁵,¹⁰.0¹³,¹⁷]octadec-10-en-17-yl (2s)-2-methylbutanoate)

PDB for NP0309899 ((1r,2s,5s,6r,13s,14r,15s,17s,18s)-6-(furan-3-yl)-13-hydroxy-18-(2-methoxy-2-oxoethyl)-1,5,15-trimethyl-14-{[(2s)-2-methylbutanoyl]oxy}-8,12-dioxo-7-oxapentacyclo[13.2.1.0²,¹¹.0⁵,¹⁰.0¹³,¹⁷]octadec-10-en-17-yl (2s)-2-methylbutanoate)

3D PDB for NP0309899 ((1r,2s,5s,6r,13s,14r,15s,17s,18s)-6-(furan-3-yl)-13-hydroxy-18-(2-methoxy-2-oxoethyl)-1,5,15-trimethyl-14-{[(2s)-2-methylbutanoyl]oxy}-8,12-dioxo-7-oxapentacyclo[13.2.1.0²,¹¹.0⁵,¹⁰.0¹³,¹⁷]octadec-10-en-17-yl (2s)-2-methylbutanoate)

SMILES for NP0309899 ((1r,2s,5s,6r,13s,14r,15s,17s,18s)-6-(furan-3-yl)-13-hydroxy-18-(2-methoxy-2-oxoethyl)-1,5,15-trimethyl-14-{[(2s)-2-methylbutanoyl]oxy}-8,12-dioxo-7-oxapentacyclo[13.2.1.0²,¹¹.0⁵,¹⁰.0¹³,¹⁷]octadec-10-en-17-yl (2s)-2-methylbutanoate)

INCHI for NP0309899 ((1r,2s,5s,6r,13s,14r,15s,17s,18s)-6-(furan-3-yl)-13-hydroxy-18-(2-methoxy-2-oxoethyl)-1,5,15-trimethyl-14-{[(2s)-2-methylbutanoyl]oxy}-8,12-dioxo-7-oxapentacyclo[13.2.1.0²,¹¹.0⁵,¹⁰.0¹³,¹⁷]octadec-10-en-17-yl (2s)-2-methylbutanoate)

Structure for NP0309899 ((1r,2s,5s,6r,13s,14r,15s,17s,18s)-6-(furan-3-yl)-13-hydroxy-18-(2-methoxy-2-oxoethyl)-1,5,15-trimethyl-14-{[(2s)-2-methylbutanoyl]oxy}-8,12-dioxo-7-oxapentacyclo[13.2.1.0²,¹¹.0⁵,¹⁰.0¹³,¹⁷]octadec-10-en-17-yl (2s)-2-methylbutanoate)

3D Structure for NP0309899 ((1r,2s,5s,6r,13s,14r,15s,17s,18s)-6-(furan-3-yl)-13-hydroxy-18-(2-methoxy-2-oxoethyl)-1,5,15-trimethyl-14-{[(2s)-2-methylbutanoyl]oxy}-8,12-dioxo-7-oxapentacyclo[13.2.1.0²,¹¹.0⁵,¹⁰.0¹³,¹⁷]octadec-10-en-17-yl (2s)-2-methylbutanoate)